Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2664 Acer truncatum HOM05D025728 ORTHO05D023188 6.5e-44 180.3 86 100.0
Atru.chr4.2665 Acer truncatum HOM05D025728 ORTHO05D023188 1.8e-38 162.2 85 89.4
Atru.chr4.2666 Acer truncatum HOM05D025728 ORTHO05D023188 3.0e-33 144.8 88 78.4
Atru.chr4.2667 Acer truncatum HOM05D002163 ORTHO05D023188 3.9e-33 144.4 81 85.2
Atru.chr2.3150 Acer truncatum HOM05D025728 ORTHO05D023188 1.5e-27 125.9 82 76.8
Medtr4g109280 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-08 62.4 107 40.2
TAR626G0901 Trochodendron aralioides HOM05D000007 ORTHO05D000017 3.4e-08 61.6 81 43.2
Potri.001G318400 Populus trichocarpa HOM05D000007 ORTHO05D000017 5.7e-08 60.8 86 43.0
Lj2g0023053 Lotus japonicus HOM05D000007 ORTHO05D000017 7.5e-08 60.5 76 39.5
PSO675G2314 Papaver somniferum HOM05D000007 ORTHO05D000017 7.5e-08 60.5 86 37.2
Lj2g0025952 Lotus japonicus HOM05D000007 ORTHO05D000017 9.8e-08 60.1 76 39.5
Medtr3g034180 Medicago truncatula HOM05D000007 ORTHO05D000017 9.8e-08 60.1 94 36.2
PSO210G7524 Papaver somniferum HOM05D000007 ORTHO05D000017 9.8e-08 60.1 72 41.7
Sopen04g026400 Solanum pennellii HOM05D000007 ORTHO05D000039 9.8e-08 60.1 67 46.3
Lj2g0026007 Lotus japonicus HOM05D000007 ORTHO05D000017 1.3e-07 59.7 76 39.5
Nn1g03289 Nelumbo nucifera HOM05D000007 ORTHO05D000017 1.3e-07 59.7 87 36.8
TAR627G0357 Trochodendron aralioides HOM05D000007 ORTHO05D000521 1.3e-07 59.7 86 39.5
AUR62026585 Chenopodium quinoa HOM05D000007 ORTHO05D000017 1.7e-07 59.3 84 38.1
COL.COLO4_14583 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.7e-07 59.3 43 55.8
TPR.G33673 Trifolium pratense HOM05D000007 ORTHO05D000017 2.2e-07 58.9 74 40.5
BcaB07g32865 Brassica carinata HOM05D000209 ORTHO05D000129 2.8e-07 58.5 77 35.1
FvH4_1g18430 Fragaria vesca HOM05D000007 ORTHO05D000017 2.8e-07 58.5 82 39.0
Medtr3g034130 Medicago truncatula HOM05D000007 ORTHO05D000017 2.8e-07 58.5 93 40.9
QL04p045513 Quercus lobata HOM05D000007 ORTHO05D000039 2.8e-07 58.5 54 48.1
VMungo1215G3073 Vigna mungo HOM05D000007 ORTHO05D000017 2.8e-07 58.5 75 36.0
FAN14G2850 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.7e-07 58.2 50 58.0
Medtr8g032380 Medicago truncatula HOM05D000007 ORTHO05D000017 4.9e-07 57.8 104 39.4
Medtr8g433040 Medicago truncatula HOM05D000007 ORTHO05D000017 4.9e-07 57.8 104 39.4
TPR.G23712 Trifolium pratense HOM05D000007 ORTHO05D000017 4.9e-07 57.8 101 38.6
TPR.G29653 Trifolium pratense HOM05D000007 ORTHO05D000017 4.9e-07 57.8 110 35.5
TPR.G8751 Trifolium pratense HOM05D000007 ORTHO05D000017 4.9e-07 57.8 75 40.0
FAN24G1725 Fragaria x ananassa HOM05D000007 ORTHO05D046568 6.3e-07 57.4 83 34.9
QL08p017454 Quercus lobata HOM05D000007 ORTHO05D000017 6.3e-07 57.4 82 37.8
Sabra16G0201400 Salix brachista HOM05D000007 ORTHO05D000017 6.3e-07 57.4 92 39.1
Eucgr.H02931 Eucalyptus grandis HOM05D000007 ORTHO05D000017 8.3e-07 57.0 85 38.8
Lj2g0027921 Lotus japonicus HOM05D000007 ORTHO05D000017 8.3e-07 57.0 76 38.2
Lj5g0014558 Lotus japonicus HOM05D000007 ORTHO05D000017 8.3e-07 57.0 72 41.7
Dinv04466 Davidia involucrata HOM05D000007 ORTHO05D000039 1.1e-06 56.6 98 35.7
Eucgr.H02929 Eucalyptus grandis HOM05D000007 ORTHO05D000017 1.1e-06 56.6 85 37.6
Medtr4g109270 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-06 56.6 110 33.6
Peaxi162Scf00597g00412 Petunia axillaris HOM05D000007 ORTHO05D000017 1.1e-06 56.6 84 36.9
Potri.001G318300 Populus trichocarpa HOM05D000007 ORTHO05D000017 1.1e-06 56.6 87 36.8
QL07p009452 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-06 56.6 99 36.4
Aqoxy2G03513 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 1.4e-06 56.2 87 39.1
EL10Ac8g20564 Beta vulgaris HOM05D000007 ORTHO05D000017 1.4e-06 56.2 87 35.6
PSO447G0264 Papaver somniferum HOM05D000007 ORTHO05D000017 1.4e-06 56.2 72 37.5
A05p38600 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-06 55.8 80 31.2
Eucgr.H02934 Eucalyptus grandis HOM05D000007 ORTHO05D000017 1.8e-06 55.8 77 36.4
FvH4_6g34412 Fragaria vesca HOM05D000007 ORTHO05D000039 1.8e-06 55.8 50 56.0
HanXRQChr12g0355971 Helianthus annuus HOM05D000007 ORTHO05D004974 1.8e-06 55.8 88 36.4
Lj6A562T41 Lonicera japonica HOM05D000007 ORTHO05D010342 1.8e-06 55.8 73 39.7
Lj1g0023827 Lotus japonicus HOM05D000007 ORTHO05D000017 1.8e-06 55.8 69 37.7
Medtr4g023080 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-06 55.8 110 35.5
Medtr8g013010 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-06 55.8 72 44.4
C05p57490 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-06 55.5 80 31.2
BraA05t22651Z Brassica rapa HOM05D000209 ORTHO05D000129 2.4e-06 55.5 80 31.2
Dinv38361 Davidia involucrata HOM05D000007 ORTHO05D000017 2.4e-06 55.5 78 33.3
FvH4_1g18391 Fragaria vesca HOM05D000007 ORTHO05D000017 2.4e-06 55.5 82 37.8
FAN03G2025 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.4e-06 55.5 66 42.4
FAN06G4396 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.4e-06 55.5 66 42.4
Medtr4g117780 Medicago truncatula HOM05D000007 ORTHO05D000017 2.4e-06 55.5 69 42.0
Prupe.6G214900 Prunus persica HOM05D000007 ORTHO05D000017 2.4e-06 55.5 93 38.7
RcHm_v2.0_Chr2g0122651 Rosa chinensis HOM05D000007 ORTHO05D013322 2.4e-06 55.5 69 40.6
vmacro23506 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 2.4e-06 55.5 83 37.3
arahy.Tifrunner.gnm1.ann1.SE5UPX Arachis hypogaea HOM05D000007 ORTHO05D000017 3.1e-06 55.1 64 39.1
Eucgr.H02923 Eucalyptus grandis HOM05D000007 ORTHO05D000017 3.1e-06 55.1 85 32.9
FvH4_1g18870 Fragaria vesca HOM05D000007 ORTHO05D000017 3.1e-06 55.1 80 38.8
FAN01G3104 Fragaria x ananassa HOM05D000007 ORTHO05D000399 3.1e-06 55.1 63 39.7
FAN06G4529 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.1e-06 55.1 66 40.9
Medtr4g118380 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-06 55.1 91 40.7
QL07p009219 Quercus lobata HOM05D000007 ORTHO05D000039 3.1e-06 55.1 99 35.4
RcHm_v2.0_Chr5g0030151 Rosa chinensis HOM05D000007 ORTHO05D000017 3.1e-06 55.1 65 47.7
Medtr1g097490 Medicago truncatula HOM05D000007 ORTHO05D000017 4.1e-06 54.7 46 47.8
Medtr4g023150 Medicago truncatula HOM05D000007 ORTHO05D000017 4.1e-06 54.7 72 38.9
RcHm_v2.0_Chr6g0262491 Rosa chinensis HOM05D000007 ORTHO05D000039 4.1e-06 54.7 77 32.5
Sc05g0008360 Simmondsia chinensis HOM05D000007 ORTHO05D000017 4.1e-06 54.7 85 35.3
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.4e-06 54.3 48 50.0
CiPaw.07G037600 Carya illinoinensis HOM05D000007 ORTHO05D000017 5.4e-06 54.3 73 38.4
Lj4g0001610 Lotus japonicus HOM05D000007 ORTHO05D000017 5.4e-06 54.3 75 38.7
Medtr3g034160 Medicago truncatula HOM05D000007 ORTHO05D000017 5.4e-06 54.3 93 35.5
Potri.017G058000 Populus trichocarpa HOM05D000007 ORTHO05D000017 5.4e-06 54.3 73 37.0
TWI31G0323 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.4e-06 54.3 57 47.4
FvH4_2g33500 Fragaria vesca HOM05D000007 ORTHO05D000017 7.0e-06 53.9 89 34.8
FvH4_7g09840 Fragaria vesca HOM05D000007 ORTHO05D000017 7.0e-06 53.9 66 40.9
FAN02G1127 Fragaria x ananassa HOM05D000007 ORTHO05D000017 7.0e-06 53.9 92 37.0
HanXRQChr03g0074871 Helianthus annuus HOM05D000007 ORTHO05D000521 7.0e-06 53.9 84 34.5
Lj5g0024418 Lotus japonicus HOM05D000007 ORTHO05D000017 7.0e-06 53.9 70 41.4
Medtr1g097330 Medicago truncatula HOM05D000007 ORTHO05D000017 7.0e-06 53.9 47 46.8
Medtr4g117850 Medicago truncatula HOM05D000007 ORTHO05D000017 7.0e-06 53.9 74 37.8
Medtr8g433030 Medicago truncatula HOM05D000007 ORTHO05D000017 7.0e-06 53.9 85 41.2
Oeu041630.1 Olea europaea HOM05D000007 ORTHO05D000039 7.0e-06 53.9 38 60.5
PSO384G1360 Papaver somniferum HOM05D000007 ORTHO05D000017 7.0e-06 53.9 57 42.1
PSO384G2323 Papaver somniferum HOM05D000007 ORTHO05D000017 7.0e-06 53.9 57 42.1
QL04p037150 Quercus lobata HOM05D000007 ORTHO05D000039 7.0e-06 53.9 37 54.1
RcHm_v2.0_Chr1g0347131 Rosa chinensis HOM05D000007 ORTHO05D000017 7.0e-06 53.9 82 31.7
A09p34140 Brassica napus HOM05D000209 ORTHO05D000129 9.2e-06 53.5 71 33.8
Migut.G01259 Erythranthe guttata HOM05D000007 ORTHO05D000017 9.2e-06 53.5 59 47.5
FAN05G0839 Fragaria x ananassa HOM05D000007 ORTHO05D000017 9.2e-06 53.5 92 37.0
HanXRQChr12g0356011 Helianthus annuus HOM05D005076 ORTHO05D004974 9.2e-06 53.5 86 38.4
Medtr4g117750 Medicago truncatula HOM05D000007 ORTHO05D000017 9.2e-06 53.5 69 44.9
PSO229G0053 Papaver somniferum HOM05D000007 ORTHO05D000017 9.2e-06 53.5 91 37.4
Prupe.3G191300 Prunus persica HOM05D000007 ORTHO05D000017 9.2e-06 53.5 74 39.2
QL08p017442 Quercus lobata HOM05D000007 ORTHO05D000017 9.2e-06 53.5 79 34.2


User provided reference genes

Program Settings