Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 1.7e-199 699.1 358 100.0
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 1.0e-146 523.9 314 83.4
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 8.4e-146 520.8 316 82.3
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 1.0e-143 513.8 315 82.2
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 1.3e-143 513.5 317 81.7
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 5.1e-143 511.5 316 81.0
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 6.7e-143 511.1 317 82.3
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 6.7e-143 511.1 313 81.2
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 8.7e-143 510.8 326 80.4
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 8.7e-143 510.8 314 81.2
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 8.7e-143 510.8 314 82.5
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 1.1e-142 510.4 313 81.2
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 2.5e-142 509.2 317 80.1
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 5.7e-142 508.1 314 81.2
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 5.7e-142 508.1 317 80.8
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 1.3e-141 506.9 313 80.8
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.6e-141 506.5 315 81.0
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 4.8e-141 505.0 312 83.3
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 3.1e-140 502.3 317 78.9
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 9.0e-140 500.7 323 78.9
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 9.0e-140 500.7 331 79.2
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 2.6e-139 499.2 323 78.6
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 3.4e-139 498.8 268 91.0
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 3.4e-139 498.8 325 77.8
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 7.6e-139 497.7 313 78.9
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 7.6e-139 497.7 316 77.5
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.3e-138 496.9 323 78.3
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 1.7e-138 496.5 313 78.9
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 2.9e-138 495.7 317 77.3
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 5.0e-138 495.0 312 80.8
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 1.1e-137 493.8 314 80.9
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 1.4e-137 493.4 320 77.5
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 2.5e-137 492.7 336 75.6
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 4.2e-137 491.9 310 78.4
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 5.5e-137 491.5 312 78.2
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 5.5e-137 491.5 311 77.5
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 7.2e-137 491.1 306 78.4
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 7.2e-137 491.1 314 77.4
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 7.2e-137 491.1 317 76.7
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 1.2e-136 490.3 312 78.2
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 1.2e-136 490.3 320 77.2
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 1.2e-136 490.3 312 77.9
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 1.2e-136 490.3 318 78.6
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 1.6e-136 490.0 312 79.5
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 1.6e-136 490.0 348 72.7
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 1.6e-136 490.0 312 78.5
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 1.6e-136 490.0 325 76.6
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 2.1e-136 489.6 313 78.0
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 2.7e-136 489.2 312 79.8
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 4.6e-136 488.4 325 75.7
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 1.0e-135 487.3 312 78.2
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 1.3e-135 486.9 309 80.3
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 1.8e-135 486.5 316 76.6
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 3.0e-135 485.7 312 77.2
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 3.9e-135 485.3 312 76.9
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 3.9e-135 485.3 324 75.0
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 5.1e-135 485.0 326 76.4
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 8.7e-135 484.2 324 75.9
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 8.7e-135 484.2 313 77.0
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 8.7e-135 484.2 325 75.7
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 1.1e-134 483.8 313 76.0
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 1.5e-134 483.4 312 76.3
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 4.3e-134 481.9 314 76.4
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 3.7e-133 478.8 312 75.6
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 4.8e-133 478.4 312 76.3
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 4.8e-133 478.4 306 78.8
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 6.3e-133 478.0 353 70.5
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 8.2e-133 477.6 307 80.1
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 1.1e-132 477.2 314 76.1
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 1.8e-132 476.5 362 69.9
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 2.4e-132 476.1 312 76.3
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 3.1e-132 475.7 312 76.3
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 3.1e-132 475.7 312 76.3
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 3.1e-132 475.7 326 73.3
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 4.1e-132 475.3 310 76.8
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 1.2e-131 473.8 321 73.5
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 1.5e-131 473.4 312 74.7
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 2.0e-131 473.0 323 72.8
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 2.6e-131 472.6 315 74.6
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 4.5e-131 471.9 335 71.0
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 5.9e-131 471.5 334 73.4
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 1.7e-130 469.9 310 76.5
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 7.2e-129 464.5 286 81.8
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 9.4e-129 464.2 314 73.6
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 2.1e-128 463.0 312 74.4
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 2.7e-128 462.6 313 72.2
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 4.7e-128 461.8 366 66.4
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 3.9e-127 458.8 315 74.3
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 1.5e-126 456.8 315 73.3
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 2.0e-126 456.4 298 77.5
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 3.3e-126 455.7 318 74.8
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 4.4e-126 455.3 313 72.5
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 5.7e-126 454.9 296 78.4
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 9.7e-126 454.1 350 69.4
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 2.2e-125 453.0 315 72.1
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 3.7e-125 452.2 314 72.9
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 4.8e-125 451.8 314 72.6
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 9.1e-124 447.6 313 72.8
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 4.7e-120 435.3 267 79.4
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.8e-119 433.3 328 70.1
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 3.0e-119 432.6 377 61.5
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 3.3e-118 429.1 247 83.0
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 9.7e-118 427.6 260 80.8
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 1.3e-114 417.2 258 82.2
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 1.6e-107 393.7 258 74.8
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 4.8e-101 372.1 305 60.7
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 4.1e-100 369.0 309 60.8
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 7.0e-100 368.2 314 62.1
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 8.6e-98 361.3 340 55.3
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 2.8e-96 356.3 260 68.1
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 7.5e-94 348.2 210 78.6
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 2.7e-91 339.7 319 58.3
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 2.7e-91 339.7 331 58.3
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 1.1e-89 334.3 319 59.9
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.2e-88 330.9 301 60.1
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 6.8e-87 325.1 199 79.9
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 7.0e-84 315.1 275 57.8
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.0e-82 309.7 229 68.6
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 1.1e-81 307.8 346 51.4
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 9.2e-76 288.1 201 73.6
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 7.8e-75 285.0 179 77.7
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 9.5e-73 278.1 320 50.0
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 8.3e-69 265.0 178 75.8
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 7.1e-68 261.9 343 41.7
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 8.6e-66 255.0 201 68.7
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 1.5e-65 254.2 177 74.6
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 2.6e-62 243.4 169 72.2
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 2.6e-62 243.4 168 70.8
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 2.7e-59 233.4 337 41.8
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.0e-58 229.9 193 64.2
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 1.5e-57 227.6 168 72.0
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 3.6e-56 223.0 333 39.9
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.4e-55 220.3 133 79.7
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 6.6e-50 202.2 268 42.9
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 6.6e-50 202.2 121 78.5
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 4.3e-49 199.5 127 73.2
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 2.1e-48 197.2 128 71.1
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 8.1e-48 195.3 288 37.8
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 1.2e-43 181.4 365 34.8
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 2.5e-41 173.7 92 91.3
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 2.8e-40 170.2 129 66.7
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 5.3e-31 139.4 315 35.9
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 5.8e-30 136.0 143 57.3
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 1.0e-29 135.2 139 52.5
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 3.3e-25 120.2 70 80.0
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 5.7e-25 119.4 87 73.6
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 3.2e-20 103.6 77 63.6
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 8.5e-13 79.0 63 66.7
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 7.9e-11 72.4 48 75.0


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