Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 2.4e-85 318.9 177 100.0
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 6.6e-35 151.4 127 66.1
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 6.6e-35 151.4 127 66.1
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 8.7e-35 151.0 186 55.4
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 1.5e-34 150.2 127 66.1
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 1.5e-34 150.2 127 66.1
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 1.5e-34 150.2 177 54.8
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 5.6e-34 148.3 172 56.4
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 1.3e-33 147.1 189 52.9
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 2.1e-33 146.4 181 54.7
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 2.8e-33 146.0 172 55.8
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 3.6e-33 145.6 182 53.8
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.6e-33 145.6 181 50.3
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 3.6e-33 145.6 184 51.1
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 4.8e-33 145.2 175 52.6
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 4.8e-33 145.2 181 51.9
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 1.8e-32 143.3 174 54.6
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 1.8e-32 143.3 187 52.9
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 3.1e-32 142.5 186 50.0
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 5.3e-32 141.7 184 51.1
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 5.3e-32 141.7 173 53.2
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 6.9e-32 141.4 186 53.8
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 9.0e-32 141.0 181 50.3
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 9.0e-32 141.0 190 50.0
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 1.2e-31 140.6 179 53.1
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.2e-31 140.6 181 50.3
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 2.6e-31 139.4 187 51.3
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 3.4e-31 139.0 184 49.5
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 3.4e-31 139.0 166 53.0
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 4.5e-31 138.7 130 65.4
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 5.8e-31 138.3 173 51.4
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 5.8e-31 138.3 180 49.4
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 1.3e-30 137.1 189 49.7
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.3e-30 137.1 168 50.6
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 2.2e-30 136.3 114 70.2
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 2.2e-30 136.3 114 68.4
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 2.2e-30 136.3 114 68.4
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 2.2e-30 136.3 127 62.2
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 2.2e-30 136.3 127 62.2
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 2.2e-30 136.3 127 62.2
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 2.2e-30 136.3 172 52.3
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 2.2e-30 136.3 187 52.9
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 3.8e-30 135.6 185 52.4
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.8e-30 135.6 172 52.3
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 6.4e-30 134.8 127 61.4
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 6.4e-30 134.8 180 50.6
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 8.4e-30 134.4 110 68.2
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 1.1e-29 134.0 170 52.4
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.1e-29 134.0 87 81.6
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 2.4e-29 132.9 180 50.0
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 2.4e-29 132.9 170 51.2
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 2.4e-29 132.9 181 50.8
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 2.4e-29 132.9 102 70.6
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 7.1e-29 131.3 180 50.0
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 7.1e-29 131.3 136 57.4
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 9.3e-29 131.0 146 56.2
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 2.1e-28 129.8 183 48.1
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 2.7e-28 129.4 176 48.9
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 3.5e-28 129.0 173 46.8
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 6.0e-28 128.3 116 61.2
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 1.0e-27 127.5 157 52.9
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 1.3e-27 127.1 183 48.1
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 1.3e-27 127.1 177 48.0
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 2.3e-27 126.3 187 47.1
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 3.0e-27 125.9 123 58.5
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 3.0e-27 125.9 174 50.0
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 5.1e-27 125.2 183 46.4
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 6.7e-27 124.8 180 48.9
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 1.5e-26 123.6 158 50.6
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 1.9e-26 123.2 169 50.3
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 2.5e-26 122.9 185 48.1
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 3.3e-26 122.5 131 55.7
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 3.3e-26 122.5 89 76.4
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 4.3e-26 122.1 119 62.2
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 5.6e-26 121.7 109 67.0
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 2.1e-25 119.8 129 58.1
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 2.8e-25 119.4 92 71.7
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 4.8e-25 118.6 120 62.5
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 6.2e-25 118.2 77 81.8
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 8.1e-25 117.9 101 67.3
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 1.4e-24 117.1 96 69.8
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 2.4e-24 116.3 83 74.7
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 2.4e-24 116.3 177 46.3
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 6.9e-24 114.8 157 49.0
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 6.9e-24 114.8 79 78.5
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 2.0e-23 113.2 111 63.1
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 7.6e-23 111.3 107 57.9
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 1.3e-22 110.5 93 65.6
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 4.9e-22 108.6 83 67.5
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 4.9e-22 108.6 182 45.6
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.1e-21 107.5 67 79.1
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 4.2e-21 105.5 66 78.8
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.2e-20 104.0 111 56.8
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 1.6e-20 103.6 75 72.0
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 2.1e-20 103.2 87 69.0
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 3.9e-19 99.0 164 40.9
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 5.1e-19 98.6 84 61.9
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.3e-17 94.0 60 76.7
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 7.6e-15 84.7 147 40.1
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 1.0e-14 84.3 84 53.6
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 3.8e-14 82.4 65 64.6
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 4.6e-12 75.5 87 48.3
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 4.3e-10 68.9 70 58.6
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 3.7e-09 65.9 118 43.2
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.1e-08 64.3 43 74.4
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 1.2e-07 60.8 111 36.0


User provided reference genes

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