Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2423 Acer truncatum HOM05D008098 ORTHO05D009893 2.6e-83 312.0 155 100.0
Manes.15G031000 Manihot esculenta HOM05D008098 ORTHO05D009893 1.9e-22 109.8 144 47.2
Ciclev10006287m.g Citrus clementina HOM05D008098 ORTHO05D009893 3.4e-19 99.0 110 52.7
Hma1.2p1_1572F.1_g291470 Hydrangea macrophylla HOM05D008098 ORTHO05D009893 1.3e-18 97.1 138 45.7
Dinv14021 Davidia involucrata HOM05D008098 ORTHO05D009893 1.3e-15 87.0 142 41.5
Prupe.1G018100 Prunus persica HOM05D008098 ORTHO05D009893 1.3e-15 87.0 134 39.6
Gohir.D09G220150 Gossypium hirsutum HOM05D008098 ORTHO05D009893 2.2e-13 79.7 102 47.1
Dinv44560 Davidia involucrata HOM05D008098 ORTHO05D009893 2.8e-13 79.3 129 40.3
TAR633G1927 Trochodendron aralioides HOM05D008098 ORTHO05D009893 3.1e-12 75.9 145 36.6
TWI09G1469 Tripterygium wilfordii HOM05D039213 ORTHO05D037432 1.5e-11 73.6 163 34.4
TAR633G0062 Trochodendron aralioides HOM05D008098 ORTHO05D009893 7.7e-11 71.2 147 34.0
TAR260G0007 Trochodendron aralioides HOM05D008098 ORTHO05D009893 1.4e-09 67.0 166 29.5
TAR636G3050 Trochodendron aralioides HOM05D008098 ORTHO05D009893 5.5e-09 65.1 145 31.0
Potri.002G050100 Populus trichocarpa HOM05D008098 ORTHO05D009893 9.4e-09 64.3 51 51.0
Rhsim04G0199800 Rhododendron simsii HOM05D008098 ORTHO05D009893 9.4e-09 64.3 141 36.9
Sabra05G0162400 Salix brachista HOM05D008098 ORTHO05D009893 1.2e-08 63.9 65 40.0
Dinv34781 Davidia involucrata HOM05D008098 ORTHO05D009893 4.6e-08 62.0 140 33.6
CSS0015317 Camellia sinensis var. sinensis HOM05D008098 ORTHO05D009893 6.1e-08 61.6 94 38.3
Nn1g02382 Nelumbo nucifera HOM05D008098 ORTHO05D009893 6.1e-08 61.6 136 33.1
GSVIVG01001187001 Vitis vinifera HOM05D008098 ORTHO05D009893 1.4e-07 60.5 68 42.6
Actinidia23529 Actinidia chinensis HOM05D008098 ORTHO05D009893 1.8e-07 60.1 129 34.9
Glyma.16G013000 Glycine max HOM05D000562 ORTHO05D000388 3.9e-07 58.9 97 33.0
Lj2A1168T22 Lonicera japonica HOM05D008098 ORTHO05D009893 6.7e-07 58.2 144 32.6
Lj9A530T23 Lonicera japonica HOM05D008098 ORTHO05D009893 6.7e-07 58.2 144 32.6
Sc17g0001270 Simmondsia chinensis HOM05D008098 ORTHO05D009893 1.5e-06 57.0 48 52.1
Duzib151G1130 Durio zibethinus HOM05D000562 ORTHO05D000388 2.0e-06 56.6 71 45.1
Os08g0451200 Oryza sativa ssp. japonica HOM05D000562 ORTHO05D000388 2.5e-06 56.2 68 41.2
Ca_02228_v3 Cicer arietinum L. HOM05D000690 ORTHO05D002679 3.3e-06 55.8 54 51.9
CiPaw.07G089300 Carya illinoinensis HOM05D008098 ORTHO05D009893 4.3e-06 55.5 136 28.7
Sp5g00310 Schrenkiella parvula HOM05D013860 ORTHO05D009893 4.3e-06 55.5 59 45.8
Glyma.07G044900 Glycine max HOM05D000562 ORTHO05D000388 7.4e-06 54.7 76 36.8
CSS0035580 Camellia sinensis var. sinensis HOM05D008098 ORTHO05D009893 9.7e-06 54.3 64 37.5


User provided reference genes

Program Settings