Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2269 Acer truncatum HOM05D000017 ORTHO05D013913 6.8e-232 807.0 416 100.0
Atru.chr1.3834 Acer truncatum HOM05D000017 ORTHO05D000013 3.6e-31 140.2 330 31.8
Ciclev10031984m.g Citrus clementina HOM05D042200 ORTHO05D013913 1.4e-30 138.3 371 28.8
Sed0022463 Sechium edule HOM05D000017 ORTHO05D000013 3.0e-30 137.1 478 27.2
Atru.chr12.1233 Acer truncatum HOM05D000017 ORTHO05D000013 2.9e-28 130.6 376 30.1
ClCG01G015130 Citrullus lanatus HOM05D000017 ORTHO05D000013 4.3e-24 116.7 480 26.0
CsaV3_6G041240 Cucumis sativus L. HOM05D000017 ORTHO05D000013 4.3e-24 116.7 477 25.8
Atru.chr1.3548 Acer truncatum HOM05D000017 ORTHO05D000013 1.2e-23 115.2 342 27.5
Atru.chr7.592 Acer truncatum HOM05D000017 ORTHO05D000013 5.4e-19 99.8 328 24.4
Atru.chr2.2336 Acer truncatum HOM05D000017 ORTHO05D000013 1.2e-18 98.6 336 26.5
CANSAT11G1332 Cannabis sativa HOM05D013832 ORTHO05D013913 5.6e-16 89.7 362 25.1
Atru.chr4.975 Acer truncatum HOM05D000017 ORTHO05D000013 2.1e-15 87.8 284 29.2
Atru.chr6.42 Acer truncatum HOM05D000017 ORTHO05D000013 2.8e-15 87.4 284 30.3
TWI77G0111 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.0e-14 83.6 309 24.9
Atru.chr1.1221 Acer truncatum HOM05D000017 ORTHO05D013913 5.2e-14 83.2 121 38.8
TWI74G0037 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-13 82.0 339 24.8
TWI74G0899 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-13 82.0 339 24.8
TWI53G1561 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.5e-13 81.6 339 24.8
Atru.chr13.2210 Acer truncatum HOM05D000017 ORTHO05D000013 2.6e-13 80.9 130 36.2
TWI77G0746 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.6e-13 80.9 314 25.2
TWI18G0436 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.4e-13 80.5 314 25.2
TWI74G1513 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.4e-13 80.5 314 25.2
Atru.chr3.3437 Acer truncatum HOM05D000017 ORTHO05D000013 5.8e-13 79.7 122 38.5
TWI38G1855 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.8e-13 79.7 314 25.2
Atru.chr3.2988 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-12 78.6 131 35.9
TWI32G1027 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.3e-12 78.6 334 23.4
MBI05_g12020_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.7e-12 78.2 347 25.9
TWI38G0900 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-12 78.2 309 25.9
TWI39G1138 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-12 78.2 314 24.8
Atru.chr7.529 Acer truncatum HOM05D000017 ORTHO05D000013 6.4e-12 76.3 139 32.4
Atru.chr8.255 Acer truncatum HOM05D000017 ORTHO05D000013 8.3e-12 75.9 113 32.7
Atru.chr9.236 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-11 75.5 81 38.3
TWI53G1455 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.9e-11 74.7 325 24.0
Atru.chr3.4260 Acer truncatum HOM05D000017 ORTHO05D000013 2.4e-11 74.3 95 38.9
Atru.chr5.1934 Acer truncatum HOM05D000017 ORTHO05D000013 2.4e-11 74.3 191 30.4
Oeu035486.1 Olea europaea HOM05D000017 ORTHO05D000013 4.6e-10 70.1 91 39.6
Oeu010167.1 Olea europaea HOM05D000017 ORTHO05D000013 6.0e-10 69.7 91 39.6
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 6.0e-10 69.7 298 27.9
Oeu009060.1 Olea europaea HOM05D000017 ORTHO05D000013 1.0e-09 68.9 91 39.6
Oeu020631.1 Olea europaea HOM05D000017 ORTHO05D000013 1.0e-09 68.9 91 37.4
Oeu042395.1 Olea europaea HOM05D000017 ORTHO05D000013 1.3e-09 68.6 91 38.5
Oeu029602.1 Olea europaea HOM05D000017 ORTHO05D000013 2.3e-09 67.8 103 36.9
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-09 67.4 88 37.5
Atru.chr6.1860 Acer truncatum HOM05D000017 ORTHO05D000013 3.9e-09 67.0 125 35.2
CANSAT21G1475 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-09 67.0 87 35.6
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-09 67.0 87 35.6
CANSAT80G2780 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-09 67.0 87 35.6
Oeu024293.1 Olea europaea HOM05D000017 ORTHO05D000013 3.9e-09 67.0 132 28.8
Atru.chr2.2315 Acer truncatum HOM05D000017 ORTHO05D000013 6.6e-09 66.2 129 29.5
CANSAT64G0409 Cannabis sativa HOM05D000017 ORTHO05D000013 6.6e-09 66.2 88 36.4
TAR279G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 6.6e-09 66.2 366 26.5
Atru.chr13.2247 Acer truncatum HOM05D000017 ORTHO05D000013 8.6e-09 65.9 83 36.1
Oeu055217.1 Olea europaea HOM05D000017 ORTHO05D000013 8.6e-09 65.9 103 34.0
Atru.chr2.1868 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-08 65.5 83 34.9
CANSAT11G1061 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-08 65.5 92 38.0
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-08 65.5 346 25.1
PSO761G0585 Papaver somniferum HOM05D000017 ORTHO05D000013 1.1e-08 65.5 342 23.1
Atru.chr2.685 Acer truncatum HOM05D000017 ORTHO05D013913 1.5e-08 65.1 100 36.0
Oeu041491.1 Olea europaea HOM05D000017 ORTHO05D000013 1.9e-08 64.7 80 36.2
Oeu043048.1 Olea europaea HOM05D000017 ORTHO05D000013 1.9e-08 64.7 80 36.2
CANSAT78G0589 Cannabis sativa HOM05D000017 ORTHO05D000013 2.5e-08 64.3 85 37.6
Thhalv10012336m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 2.5e-08 64.3 74 40.5
Oeu044754.1 Olea europaea HOM05D000017 ORTHO05D000013 2.5e-08 64.3 131 29.8
Oeu056308.1 Olea europaea HOM05D000017 ORTHO05D000013 2.5e-08 64.3 132 29.5
PSO210G1360 Papaver somniferum HOM05D000017 ORTHO05D000013 2.5e-08 64.3 335 23.0
TWI18G0050 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.5e-08 64.3 84 34.5
ATR0727G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 3.3e-08 63.9 96 35.4
CANSAT21G1876 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-08 63.9 96 35.4
CANSAT21G2374 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-08 63.9 88 37.5
Atru.chr3.3652 Acer truncatum HOM05D000017 ORTHO05D000013 4.3e-08 63.5 163 29.4
ATR0648G001 Amborella trichopoda HOM05D000017 ORTHO05D021215 5.6e-08 63.2 92 35.9
Oeu031108.1 Olea europaea HOM05D000017 ORTHO05D000013 5.6e-08 63.2 92 34.8
TWI63G0423 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.6e-08 63.2 84 34.5
Atru.chr10.302 Acer truncatum HOM05D000017 ORTHO05D000013 7.3e-08 62.8 324 24.4
Atru.chr5.3198 Acer truncatum HOM05D000017 ORTHO05D000013 7.3e-08 62.8 145 30.3
RcHm_v2.0_Chr5g0035231 Rosa chinensis HOM05D000005 ORTHO05D013913 7.3e-08 62.8 90 32.2
RcHm_v2.0_Chr5g0035701 Rosa chinensis HOM05D025402 ORTHO05D013913 7.3e-08 62.8 88 31.8
Atru.chr5.1912 Acer truncatum HOM05D000017 ORTHO05D000013 9.5e-08 62.4 75 38.7
FvH4_2g26890 Fragaria vesca HOM05D000005 ORTHO05D013913 9.5e-08 62.4 85 35.3
Oeu058107.2 Olea europaea HOM05D000017 ORTHO05D000013 9.5e-08 62.4 77 36.4
Atru.chr10.1013 Acer truncatum HOM05D000004 ORTHO05D000002 1.2e-07 62.0 145 29.7
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 62.0 106 31.1
CANSAT80G0369 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 62.0 85 37.6
RcHm_v2.0_Chr5g0034591 Rosa chinensis HOM05D025402 ORTHO05D013913 1.2e-07 62.0 88 30.7
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-07 61.6 80 32.5
CANSAT64G3012 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-07 61.6 80 32.5
ATR0915G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 2.1e-07 61.2 85 35.3
CANSAT11G0295 Cannabis sativa HOM05D000017 ORTHO05D000013 2.1e-07 61.2 124 30.6
MD10G1261100 Malus domestica HOM05D000017 ORTHO05D000013 2.1e-07 61.2 329 24.9
Nitab4.5_0000229g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.1e-07 61.2 82 34.1
Oeu020193.1 Olea europaea HOM05D000017 ORTHO05D000013 2.1e-07 61.2 91 34.1
Oeu061112.1 Olea europaea HOM05D000017 ORTHO05D000013 2.1e-07 61.2 94 30.9
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-07 60.5 85 34.1
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-07 60.5 85 34.1
Oeu002324.1 Olea europaea HOM05D000017 ORTHO05D000013 3.6e-07 60.5 72 38.9
BolC6t36480H Brassica oleracea HOM05D000017 ORTHO05D000013 4.7e-07 60.1 74 37.8
Nitab4.5_0000709g0030 Nicotiana tabacum HOM05D000017 ORTHO05D002765 4.7e-07 60.1 79 36.7
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.7e-07 60.1 94 31.9
CANSAT01G0081 Cannabis sativa HOM05D000017 ORTHO05D000013 6.2e-07 59.7 75 36.0
CANSAT01G2587 Cannabis sativa HOM05D000017 ORTHO05D000013 6.2e-07 59.7 85 36.5
CANSAT35G0454 Cannabis sativa HOM05D000017 ORTHO05D000013 6.2e-07 59.7 85 34.1
Oeu015457.1 Olea europaea HOM05D000017 ORTHO05D000013 6.2e-07 59.7 148 28.4
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 8.1e-07 59.3 85 34.1
Oeu047411.1 Olea europaea HOM05D000017 ORTHO05D000013 8.1e-07 59.3 79 36.7
Atru.chr7.247 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-06 58.9 67 40.3
CANSAT01G1220 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 58.9 75 36.0
CANSAT11G1223 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 58.9 75 36.0
CANSAT25G2383 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 58.9 92 34.8
CANSAT35G0979 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 58.9 75 36.0
CANSAT35G1006 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 58.9 75 36.0
CANSAT54G2057 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 58.9 75 36.0
CANSAT56G3361 Cannabis sativa HOM05D008401 ORTHO05D002765 1.1e-06 58.9 75 36.0
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-06 58.9 187 26.2
Nitab4.5_0008036g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-06 58.9 89 31.5
Oeu051010.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-06 58.9 87 40.2
BolC8t49765H Brassica oleracea HOM05D006289 ORTHO05D027570 1.4e-06 58.5 79 30.4
CANSAT25G1251 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-06 58.5 85 32.9
Oeu064469.1 Olea europaea HOM05D000017 ORTHO05D000013 1.8e-06 58.2 161 26.7
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 1.8e-06 58.2 350 24.9
Atru.chr1.2128 Acer truncatum HOM05D000017 ORTHO05D000013 2.4e-06 57.8 73 32.9
FvH4_3g20951 Fragaria vesca HOM05D025402 ORTHO05D013913 2.4e-06 57.8 88 28.4
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-06 57.8 105 32.4
Nitab4.5_0010319g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-06 57.8 90 33.3
Oeu027493.1 Olea europaea HOM05D000017 ORTHO05D000013 2.4e-06 57.8 79 35.4
Oeu063098.1 Olea europaea HOM05D000017 ORTHO05D000013 2.4e-06 57.8 67 41.8
Atru.chr4.1135 Acer truncatum HOM05D000017 ORTHO05D000013 3.1e-06 57.4 141 31.2
CANSAT35G1021 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-06 57.4 75 36.0
CANSAT78G1212 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-06 57.4 88 31.8
Atru.chr9.574 Acer truncatum HOM05D000017 ORTHO05D000013 4.0e-06 57.0 67 40.3
MBI16_g06792_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 4.0e-06 57.0 83 30.1
Nitab4.5_0010885g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.0e-06 57.0 79 34.2
Oeu009213.1 Olea europaea HOM05D000017 ORTHO05D000013 4.0e-06 57.0 67 40.3
Aa31sc52G160 Aethionema arabicum HOM05D002189 ORTHO05D002233 5.2e-06 56.6 75 38.7
CANSAT01G0559 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-06 56.6 76 35.5
AUR62002284 Chenopodium quinoa HOM05D000017 ORTHO05D000013 6.8e-06 56.2 79 32.9
Nitab4.5_0000692g0140 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.8e-06 56.2 94 29.8
Nitab4.5_0003730g0050 Nicotiana tabacum HOM05D000017 ORTHO05D002765 6.8e-06 56.2 79 34.2
Nitab4.5_0008559g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 6.8e-06 56.2 90 31.1
Nitab4.5_0009017g0010 Nicotiana tabacum HOM05D000017 ORTHO05D002765 6.8e-06 56.2 90 32.2
Nitab4.5_0009030g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 6.8e-06 56.2 79 35.4
PSO104G0231 Papaver somniferum HOM05D000017 ORTHO05D000013 6.8e-06 56.2 82 35.4
MELO3C030271.2 Cucumis melo HOM05D000017 ORTHO05D000013 8.9e-06 55.8 94 33.0
Nitab4.5_0008756g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.9e-06 55.8 79 34.2
Oeu025849.1 Olea europaea HOM05D000017 ORTHO05D000013 8.9e-06 55.8 72 37.5
Oeu054336.1 Olea europaea HOM05D000017 ORTHO05D000013 8.9e-06 55.8 66 39.4


User provided reference genes

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