Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2110 Acer truncatum HOM05D005324 ORTHO05D001185 2.3e-111 405.6 208 100.0
Atru.chr4.1769 Acer truncatum HOM05D005324 ORTHO05D001185 1.1e-44 184.1 150 59.3
Atru.chr7.181 Acer truncatum HOM05D005324 ORTHO05D001185 5.6e-41 171.8 153 58.2
Atru.chr4.959 Acer truncatum HOM05D005324 ORTHO05D001185 7.5e-38 161.4 151 56.3
Atru.chr9.596 Acer truncatum HOM05D005324 ORTHO05D001185 4.6e-35 152.1 146 54.8
Atru.chr3.3306 Acer truncatum HOM05D000477 ORTHO05D001185 1.9e-25 120.2 149 45.6
Atru.chr1.2076 Acer truncatum HOM05D005324 ORTHO05D001185 7.3e-25 118.2 101 59.4
Atru.chr10.1416 Acer truncatum HOM05D005324 ORTHO05D001185 2.4e-23 113.2 152 42.1
Atru.chr13.2474 Acer truncatum HOM05D005324 ORTHO05D001185 3.1e-23 112.8 108 51.9
Atru.chr1.2264 Acer truncatum HOM05D005324 ORTHO05D001185 8.4e-21 104.8 113 47.8
Ca_14742_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.4e-20 103.2 152 38.2
Ca_11659_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.2e-20 102.4 153 39.2
Ca_04090_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 5.4e-20 102.1 152 39.5
Lj2g0007658 Lotus japonicus HOM05D005324 ORTHO05D001185 1.2e-19 100.9 148 39.9
Ca_22549_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.3e-18 97.4 152 38.2
Ca_15184_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 6.6e-18 95.1 152 36.8
Ca_19239_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 6.6e-18 95.1 152 38.2
Ca_14332_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.5e-17 94.0 152 37.5
Lj6g0018849 Lotus japonicus HOM05D005324 ORTHO05D001185 1.5e-17 94.0 178 34.8
Ca_05672_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.9e-17 93.6 152 35.5
Atru.chr9.330 Acer truncatum HOM05D005324 ORTHO05D001185 2.5e-17 93.2 86 52.3
Thhalv10023188m.g Eutrema salsugineum HOM05D003376 ORTHO05D000002 9.6e-17 91.3 147 41.5
Thhalv10028344m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 9.6e-17 91.3 150 40.7
Thhalv10012231m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.4e-15 87.4 150 39.3
Ca_14763_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.0e-15 85.9 152 36.2
Ca_23844_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.0e-15 85.9 153 35.3
Ca_30746_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.0e-15 85.9 153 35.3
Glyma.19G076000 Glycine max HOM05D005324 ORTHO05D001185 3.4e-14 82.8 148 33.8
A09p27420 Brassica napus HOM05D003376 ORTHO05D001185 4.5e-14 82.4 142 34.5
Lj3g0022640 Lotus japonicus HOM05D005324 ORTHO05D001185 5.8e-14 82.0 155 36.8
A05p12450 Brassica napus HOM05D003376 ORTHO05D001185 7.6e-14 81.6 142 34.5
Thhalv10002230m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.3e-13 80.9 137 39.4
Thhalv10001103m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.7e-13 80.5 142 35.9
A06p25220 Brassica napus HOM05D003376 ORTHO05D001185 2.9e-13 79.7 142 34.5
Thhalv10002934m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.9e-13 79.7 142 35.2
Thhalv10003417m.g Eutrema salsugineum HOM05D003376 ORTHO05D000048 8.4e-13 78.2 146 34.9
Ca_19340_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.9e-12 77.0 152 33.6
Atru.chr13.2462 Acer truncatum HOM05D005324 ORTHO05D001185 3.2e-12 76.3 58 56.9
Atru.chr4.310 Acer truncatum HOM05D005324 ORTHO05D001185 4.2e-12 75.9 57 57.9
Atru.chr11.502 Acer truncatum HOM05D005324 ORTHO05D001185 1.2e-11 74.3 58 55.2
Thhalv10003477m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.2e-11 74.3 111 39.6
Lj6g0011364 Lotus japonicus HOM05D005324 ORTHO05D001185 1.2e-11 74.3 167 32.9
Glyma.06G234900 Glycine max HOM05D005324 ORTHO05D001185 1.6e-11 73.9 115 35.7
Thhalv10028343m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 3.5e-11 72.8 146 32.9
AL88U10010 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 6.0e-11 72.0 140 36.4
AL88U10020 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 6.0e-11 72.0 140 36.4
Ca_05166_v3 Cicer arietinum L. HOM05D005324 ORTHO05D000002 1.3e-10 70.9 102 36.3
COL.COLO4_29280 Corchorus olitorius HOM05D003376 ORTHO05D001185 3.9e-10 69.3 162 33.3
Ca_00995_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 5.1e-10 68.9 98 37.8
HanXRQChr09g0262521 Helianthus annuus HOM05D003376 ORTHO05D001185 8.7e-10 68.2 143 35.0
HanXRQChr09g0262541 Helianthus annuus HOM05D003326 ORTHO05D001185 8.7e-10 68.2 143 35.0
ECA246G2607 Erigeron canadensis HOM05D003326 ORTHO05D001185 1.1e-09 67.8 146 34.2
HanXRQChr09g0262491 Helianthus annuus HOM05D003376 ORTHO05D001185 1.1e-09 67.8 143 35.0
ECA236G2931 Erigeron canadensis HOM05D003376 ORTHO05D001185 1.5e-09 67.4 141 34.0
HanXRQChr09g0267851 Helianthus annuus HOM05D003376 ORTHO05D001185 1.5e-09 67.4 142 35.9
AL8G17320 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.9e-09 67.0 137 35.0
AL1G57140 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 2.5e-09 66.6 142 33.8
Ca_14697_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.5e-09 66.6 97 40.2
ECA234G2242 Erigeron canadensis HOM05D000088 ORTHO05D001030 2.5e-09 66.6 144 33.3
ECA248G1318 Erigeron canadensis HOM05D003376 ORTHO05D001185 2.5e-09 66.6 143 32.9
HanXRQChr10g0281981 Helianthus annuus HOM05D003376 ORTHO05D001185 3.3e-09 66.2 142 35.2
Lj6g0006708 Lotus japonicus HOM05D005324 ORTHO05D001185 5.6e-09 65.5 155 32.9
AL6G42760 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.3e-08 64.3 142 32.4
AL8G17310 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.6e-08 63.9 138 34.1
HanXRQChr09g0262531 Helianthus annuus HOM05D003376 ORTHO05D001185 1.6e-08 63.9 116 34.5
Thhalv10028029m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.1e-08 63.5 134 35.8
Ca_20262_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.8e-08 63.2 83 36.1
Carub.0002s1007 Capsella rubella HOM05D003376 ORTHO05D001185 4.8e-08 62.4 155 36.1
Ca_14156_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.8e-07 60.5 147 29.3
Ca_19341_v3 Cicer arietinum L. HOM05D005324 ORTHO05D000048 2.4e-07 60.1 62 41.9
Cc00_g28290 Coffea canephora HOM05D003326 ORTHO05D001185 2.4e-07 60.1 153 32.0
Atru.chr1.2372 Acer truncatum HOM05D005324 ORTHO05D001185 3.1e-07 59.7 42 66.7
Ca_25846_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.5e-06 57.4 146 30.1
C04p09000 Brassica napus HOM05D003376 ORTHO05D001185 2.0e-06 57.0 141 27.7


User provided reference genes

Program Settings