Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 4.6e-64 247.7 119 100.0
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.7e-47 192.6 99 91.9
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 6.2e-45 184.1 103 83.5
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.4e-44 182.2 99 85.9
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 3.1e-44 181.8 102 83.3
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 9.0e-44 180.3 106 80.2
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.5e-43 179.5 106 80.2
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 2.0e-43 179.1 99 85.9
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 2.6e-43 178.7 99 85.9
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.6e-43 178.7 106 79.2
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.6e-43 178.7 106 79.2
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 5.8e-43 177.6 106 80.2
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 7.6e-43 177.2 106 79.2
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 7.6e-43 177.2 106 79.2
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 1.3e-42 176.4 106 79.2
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.3e-42 176.4 100 82.0
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.3e-42 176.4 102 81.4
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 2.2e-42 175.6 98 83.7
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 2.2e-42 175.6 99 84.8
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 2.9e-42 175.3 106 78.3
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 2.9e-42 175.3 100 83.0
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.9e-42 175.3 106 78.3
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.8e-42 174.9 104 79.8
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.8e-42 174.9 98 84.7
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 3.8e-42 174.9 98 84.7
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 3.8e-42 174.9 106 77.4
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 3.8e-42 174.9 98 83.7
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 4.9e-42 174.5 99 82.8
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 4.9e-42 174.5 99 83.8
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.4e-42 174.1 99 84.8
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.4e-42 174.1 99 84.8
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 8.4e-42 173.7 106 77.4
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 1.4e-41 172.9 100 81.0
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 1.9e-41 172.6 106 75.5
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 1.9e-41 172.6 99 82.8
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.9e-41 172.6 99 82.8
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.9e-41 172.6 99 82.8
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.9e-41 172.6 99 82.8
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.9e-41 172.6 99 82.8
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 2.4e-41 172.2 98 82.7
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.4e-41 172.2 98 83.7
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.4e-41 172.2 98 83.7
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 2.4e-41 172.2 99 83.8
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.4e-41 172.2 106 76.4
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 5.4e-41 171.0 101 81.2
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.6e-40 169.5 106 75.5
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.6e-40 169.5 106 75.5
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.6e-40 169.5 99 81.8
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.6e-40 169.5 99 81.8
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 2.7e-40 168.7 106 77.4
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 3.5e-40 168.3 103 76.7
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 3.5e-40 168.3 103 75.7
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.6e-40 167.9 98 82.7
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 4.6e-40 167.9 99 80.8
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 4.6e-40 167.9 99 80.8
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 6.0e-40 167.5 106 75.5
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 6.0e-40 167.5 99 78.8
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 7.9e-40 167.2 95 82.1
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 7.9e-40 167.2 96 83.3
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 7.9e-40 167.2 99 80.8
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.0e-39 166.8 100 80.0
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 1.0e-39 166.8 99 79.8
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.0e-39 166.8 99 78.8
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.3e-39 166.4 99 79.8
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.3e-39 166.4 98 79.6
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.8e-39 166.0 98 78.6
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.8e-39 166.0 98 79.6
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.8e-39 166.0 98 79.6
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 2.3e-39 165.6 98 81.6
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.3e-39 165.6 98 77.6
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.3e-39 165.6 99 78.8
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 3.0e-39 165.2 100 77.0
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 3.0e-39 165.2 98 78.6
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 3.9e-39 164.9 100 79.0
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 3.9e-39 164.9 98 77.6
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 5.1e-39 164.5 98 77.6
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 5.1e-39 164.5 98 77.6
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 5.1e-39 164.5 98 77.6
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 5.1e-39 164.5 99 77.8
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 8.7e-39 163.7 99 76.8
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.1e-38 163.3 99 78.8
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.1e-38 163.3 99 78.8
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.9e-38 162.5 99 76.8
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.9e-38 162.5 99 76.8
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 4.3e-38 161.4 98 75.5
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 7.4e-38 160.6 95 80.0
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 2.1e-37 159.1 99 78.8
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 3.7e-37 158.3 99 78.8
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 4.8e-37 157.9 99 78.8
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 4.8e-37 157.9 99 77.8
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 4.8e-37 157.9 99 77.8
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.8e-36 156.0 100 75.0
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 5.3e-36 154.5 95 77.9
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 5.3e-36 154.5 99 76.8
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 1.0e-34 150.2 102 70.6
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.1e-33 146.7 104 67.3
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.9e-33 146.0 100 70.0
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 5.5e-33 144.4 93 73.1
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.2e-32 143.3 101 71.3
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.7e-32 142.1 98 69.4
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 6.7e-31 137.5 96 68.8
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.5e-30 136.3 98 67.3
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.3e-29 133.3 95 66.3
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 3.1e-28 128.6 105 61.0
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 3.8e-26 121.7 103 56.3
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 4.2e-25 118.2 75 70.7
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 3.5e-24 115.2 93 54.8
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 6.1e-24 114.4 88 59.1
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 1.3e-23 113.2 91 58.2
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.8e-23 112.8 88 60.2
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.9e-23 111.7 103 53.4
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 7.4e-22 107.5 66 77.3
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 7.9e-16 87.4 88 47.7
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.0e-15 87.0 83 56.6


User provided reference genes

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