Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 3.2e-75 285.0 145 100.0
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 8.9e-54 213.8 145 80.0
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 1.2e-53 213.4 149 75.2
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 2.0e-53 212.6 145 80.0
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 7.6e-53 210.7 149 75.2
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 9.9e-53 210.3 155 76.1
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 9.9e-53 210.3 149 76.5
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.9e-52 208.0 150 77.3
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 8.4e-52 207.2 149 71.1
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 8.4e-52 207.2 146 76.7
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 1.4e-51 206.5 149 71.8
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 1.9e-51 206.1 152 72.4
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 2.4e-51 205.7 139 77.7
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 3.2e-51 205.3 150 76.7
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.6e-50 203.0 150 76.0
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 2.1e-50 202.6 148 71.6
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 2.7e-50 202.2 152 71.1
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 6.0e-50 201.1 152 70.4
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 2.3e-49 199.1 146 69.9
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 3.9e-49 198.4 126 80.2
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 8.7e-49 197.2 153 68.6
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 1.5e-48 196.4 155 69.7
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 1.9e-48 196.1 147 72.1
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.9e-48 196.1 145 71.0
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 2.5e-48 195.7 146 73.3
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 4.3e-48 194.9 146 72.6
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 7.3e-48 194.1 150 73.3
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 7.3e-48 194.1 149 67.8
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 9.6e-48 193.7 153 68.0
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.2e-47 193.4 145 69.7
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 1.6e-47 193.0 146 72.6
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 1.6e-47 193.0 146 72.6
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 2.1e-47 192.6 146 72.6
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 2.1e-47 192.6 155 69.7
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 2.1e-47 192.6 147 74.1
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 2.8e-47 192.2 115 85.2
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 2.8e-47 192.2 142 73.9
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 2.8e-47 192.2 148 69.6
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 2.8e-47 192.2 160 70.0
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 3.6e-47 191.8 146 71.9
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.6e-47 191.8 149 71.8
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 4.7e-47 191.4 146 71.9
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 6.2e-47 191.0 149 71.1
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 1.1e-46 190.3 155 69.7
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.1e-46 190.3 149 70.5
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 1.1e-46 190.3 153 68.0
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 1.4e-46 189.9 141 74.5
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 1.8e-46 189.5 144 68.8
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 1.8e-46 189.5 146 69.9
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 1.8e-46 189.5 139 72.7
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 2.4e-46 189.1 128 76.6
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 2.4e-46 189.1 120 80.0
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 5.2e-46 188.0 154 66.9
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 5.2e-46 188.0 147 72.8
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 6.9e-46 187.6 139 71.9
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 9.0e-46 187.2 118 81.4
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.2e-45 186.8 123 80.5
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.5e-45 186.4 117 82.1
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 2.0e-45 186.0 137 74.5
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 2.0e-45 186.0 153 68.0
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 2.0e-45 186.0 147 67.3
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 3.4e-45 185.3 116 79.3
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 5.8e-45 184.5 149 65.8
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 5.8e-45 184.5 153 67.3
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 5.8e-45 184.5 148 65.5
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 5.8e-45 184.5 146 69.2
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 5.8e-45 184.5 118 79.7
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 1.3e-44 183.3 147 70.7
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 1.7e-44 183.0 146 70.5
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 1.7e-44 183.0 147 70.7
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 2.9e-44 182.2 121 76.0
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 6.4e-44 181.0 148 70.9
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 6.4e-44 181.0 115 81.7
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 1.1e-43 180.3 147 70.1
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.1e-43 180.3 153 66.7
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 1.4e-43 179.9 148 70.9
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 1.4e-43 179.9 117 78.6
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 2.4e-43 179.1 149 67.1
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 3.2e-43 178.7 138 69.6
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 4.2e-43 178.3 120 80.0
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 5.4e-43 177.9 120 82.5
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 7.1e-43 177.6 153 65.4
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 1.2e-42 176.8 117 77.8
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 1.2e-42 176.8 120 79.2
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 1.2e-42 176.8 138 68.1
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 1.2e-42 176.8 141 66.0
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 2.1e-42 176.0 148 70.3
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 2.1e-42 176.0 148 70.3
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 2.1e-42 176.0 144 67.4
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 2.7e-42 175.6 116 78.4
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 7.8e-42 174.1 127 72.4
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 2.3e-41 172.6 111 79.3
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 3.0e-41 172.2 117 74.4
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 8.7e-41 170.6 116 76.7
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 8.7e-41 170.6 118 72.9
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 8.7e-41 170.6 116 73.3
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.9e-40 169.5 123 70.7
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 4.3e-40 168.3 183 53.6
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 7.3e-40 167.5 154 61.0
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 7.3e-40 167.5 117 74.4
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 9.6e-40 167.2 149 68.5
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 9.6e-40 167.2 149 60.4
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 2.1e-39 166.0 143 65.0
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 2.8e-39 165.6 152 58.6
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 5.3e-38 161.4 154 59.1
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 1.5e-37 159.8 118 71.2
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 7.6e-37 157.5 141 61.7
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 1.7e-36 156.4 118 70.3
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 2.2e-36 156.0 143 61.5
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 4.2e-35 151.8 115 69.6
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 9.3e-35 150.6 78 92.3
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 2.1e-34 149.4 101 75.2
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 3.3e-32 142.1 111 68.5
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 5.3e-30 134.8 75 84.0
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 1.2e-29 133.7 82 80.5
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 1.2e-29 133.7 143 54.5
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 1.5e-29 133.3 79 83.5
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 2.4e-27 125.9 115 61.7
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 7.1e-27 124.4 115 53.9
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 7.9e-26 120.9 106 63.2
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 1.6e-23 113.2 105 60.0
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 2.4e-22 109.4 77 67.5
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 1.3e-20 103.6 75 62.7
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 6.5e-20 101.3 78 64.1
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 5.1e-17 91.7 100 48.0
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 4.3e-16 88.6 80 56.2
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 1.1e-08 63.9 36 88.9
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 9.1e-06 54.3 65 41.5


User provided reference genes

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