Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1926 Acer truncatum HOM05D000932 ORTHO05D000729 2.1e-40 169.1 120 100.0
RcHm_v2.0_Chr4g0395281 Rosa chinensis HOM05D000932 ORTHO05D000729 1.5e-09 66.6 36 91.7
MD16G1225800 Malus domestica HOM05D000932 ORTHO05D000729 2.5e-09 65.9 34 94.1
FvH4_4g04500 Fragaria vesca HOM05D000932 ORTHO05D000729 3.3e-09 65.5 34 94.1
FAN12G1711 Fragaria x ananassa HOM05D000932 ORTHO05D000729 3.3e-09 65.5 34 94.1
FAN17G1575 Fragaria x ananassa HOM05D000932 ORTHO05D000729 3.3e-09 65.5 34 94.1
FAN22G1526 Fragaria x ananassa HOM05D000932 ORTHO05D000729 3.3e-09 65.5 34 94.1
Haze_11453 Corylus avellana HOM05D000932 ORTHO05D000729 7.2e-09 64.3 35 85.7
MD13G1220700 Malus domestica HOM05D000932 ORTHO05D000729 1.6e-08 63.2 36 88.9
Prupe.1G047400 Prunus persica HOM05D000932 ORTHO05D000729 2.8e-08 62.4 34 91.2
CiPaw.01G178700 Carya illinoinensis HOM05D000932 ORTHO05D000729 3.6e-08 62.0 35 85.7
TWI09G1141 Tripterygium wilfordii HOM05D000932 ORTHO05D000729 3.6e-08 62.0 47 72.3
TWI73G0954 Tripterygium wilfordii HOM05D000932 ORTHO05D000729 3.6e-08 62.0 45 75.6
QL06p020888 Quercus lobata HOM05D000932 ORTHO05D000729 4.7e-08 61.6 35 85.7
GSVIVG01027910001 Vitis vinifera HOM05D000932 ORTHO05D000729 4.7e-08 61.6 35 85.7
Lalb_Chr21g0312501 Lupinus albus HOM05D000932 ORTHO05D000729 1.4e-07 60.1 52 65.4
Potri.008G171500 Populus trichocarpa HOM05D000932 ORTHO05D000729 1.4e-07 60.1 36 80.6
Manes.03G159600 Manihot esculenta HOM05D000932 ORTHO05D000729 1.8e-07 59.7 36 80.6
Dinv29807 Davidia involucrata HOM05D000932 ORTHO05D000729 2.3e-07 59.3 34 82.4
Duzib151G0926 Durio zibethinus HOM05D000932 ORTHO05D000729 2.3e-07 59.3 46 69.6
Sabra10G0041100 Salix brachista HOM05D000932 ORTHO05D000729 5.2e-07 58.2 35 80.0
Glyma.10G190300 Glycine max HOM05D000932 ORTHO05D000729 8.9e-07 57.4 34 85.3
Phvul.L001944 Phaseolus vulgaris HOM05D000932 ORTHO05D000729 8.9e-07 57.4 34 85.3
TPR.G28845 Trifolium pratense HOM05D000932 ORTHO05D000729 8.9e-07 57.4 34 82.4
Duzib212G0703 Durio zibethinus HOM05D000932 ORTHO05D000729 1.2e-06 57.0 46 67.4
Gohir.A09G059500 Gossypium hirsutum HOM05D000932 ORTHO05D000729 1.2e-06 57.0 35 77.1
Gorai.006G073000 Gossypium raimondii HOM05D000932 ORTHO05D000729 1.2e-06 57.0 35 77.1
Phvul.007G270600 Phaseolus vulgaris HOM05D000932 ORTHO05D000729 1.2e-06 57.0 38 76.3
Thecc.04G263300 Theobroma cacao HOM05D000932 ORTHO05D000729 1.2e-06 57.0 45 68.9
Cpa.g.sc44.6 Carica papaya HOM05D000932 ORTHO05D000729 1.5e-06 56.6 35 80.0
ClCG06G007250 Citrullus lanatus HOM05D000932 ORTHO05D000729 1.5e-06 56.6 35 74.3
CsaV3_2G012450 Cucumis sativus L. HOM05D000932 ORTHO05D000729 1.5e-06 56.6 35 74.3
Gohir.D10G158700 Gossypium hirsutum HOM05D000932 ORTHO05D000729 2.0e-06 56.2 46 65.2
Glyma.20G200400 Glycine max HOM05D000932 ORTHO05D000729 2.6e-06 55.8 34 82.4
Oeu011225.1 Olea europaea HOM05D000932 ORTHO05D000729 2.6e-06 55.8 35 74.3
CiPaw.02G107500 Carya illinoinensis HOM05D000932 ORTHO05D000729 3.4e-06 55.5 34 79.4
Ca_09803_v3 Cicer arietinum L. HOM05D002111 ORTHO05D002160 3.4e-06 55.5 50 62.0
Ca_30484_v3 Cicer arietinum L. HOM05D002111 ORTHO05D002160 3.4e-06 55.5 50 62.0
DCAR_030760 Daucus carota HOM05D000932 ORTHO05D000729 3.4e-06 55.5 35 77.1
Lalb_Chr06g0169501 Lupinus albus HOM05D000932 ORTHO05D000729 3.4e-06 55.5 52 59.6
MELO3C023041.2 Cucumis melo HOM05D000932 ORTHO05D000729 4.4e-06 55.1 35 74.3
Gohir.A10G109100 Gossypium hirsutum HOM05D000932 ORTHO05D000729 4.4e-06 55.1 45 66.7
Gohir.A10G109116 Gossypium hirsutum HOM05D000932 ORTHO05D000729 4.4e-06 55.1 45 66.7
Lalb_Chr02g0150671 Lupinus albus HOM05D000932 ORTHO05D000729 4.4e-06 55.1 36 77.8
Medtr1g073350 Medicago truncatula HOM05D000932 ORTHO05D000729 4.4e-06 55.1 33 81.8
Psat6g131680 Pisum sativum HOM05D000932 ORTHO05D000729 5.7e-06 54.7 49 57.1
CANSAT78G0790 Cannabis sativa HOM05D000932 ORTHO05D000729 7.5e-06 54.3 32 84.4
Gorai.011G178300 Gossypium raimondii HOM05D000932 ORTHO05D000729 9.8e-06 53.9 45 64.4
Sed0023179 Sechium edule HOM05D000932 ORTHO05D000729 9.8e-06 53.9 34 73.5
Sc19g0003340 Simmondsia chinensis HOM05D000932 ORTHO05D000729 9.8e-06 53.9 44 68.2


User provided reference genes

Program Settings