Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 6.8e-259 896.7 433 100.0
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 9.1e-179 630.6 433 72.3
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 1.9e-176 622.9 433 70.2
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 6.8e-174 614.4 432 70.6
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 1.7e-169 599.7 426 70.2
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 8.6e-169 597.4 435 66.7
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 1.2e-167 593.6 436 65.6
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 1.6e-167 593.2 434 68.0
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 3.6e-167 592.0 434 66.4
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 8.0e-167 590.9 436 67.0
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 1.8e-166 589.7 422 67.8
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 2.3e-166 589.3 435 68.3
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 2.3e-166 589.3 433 67.0
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 7.5e-165 584.3 437 65.0
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 2.2e-164 582.8 428 66.1
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 8.3e-164 580.9 428 65.9
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 1.4e-163 580.1 433 66.3
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 9.2e-163 577.4 433 67.2
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 3.0e-161 572.4 433 66.5
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 9.5e-160 567.4 435 64.1
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 2.1e-159 566.2 434 66.4
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 6.2e-159 564.7 402 68.7
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 4.0e-158 562.0 429 65.3
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 1.3e-156 557.0 435 66.4
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 2.2e-156 556.2 434 62.9
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 2.9e-156 555.8 423 65.7
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 3.7e-156 555.4 391 70.8
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 3.7e-156 555.4 441 63.7
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 3.7e-156 555.4 441 64.2
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 8.3e-156 554.3 434 62.2
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 1.2e-154 550.4 435 65.1
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 1.2e-154 550.4 435 65.1
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 2.1e-154 549.7 414 64.3
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 4.6e-154 548.5 433 65.8
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 1.0e-153 547.4 435 62.1
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 5.1e-153 545.0 435 62.1
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 5.6e-152 541.6 436 65.4
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 2.1e-151 539.7 439 62.4
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 2.1e-151 539.7 431 62.6
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 6.2e-151 538.1 437 63.8
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 1.5e-149 533.5 434 61.3
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 1.5e-149 533.5 433 61.7
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.0e-149 533.1 437 63.2
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 3.4e-149 532.3 434 61.3
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.3e-148 530.4 437 63.2
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 1.3e-148 530.4 428 62.9
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 6.4e-148 528.1 427 63.0
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 2.4e-147 526.2 435 62.1
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.4e-147 526.2 428 61.7
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 3.2e-147 525.8 459 60.3
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 7.1e-147 524.6 442 62.0
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 1.2e-146 523.9 438 61.0
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 2.1e-146 523.1 435 63.2
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 8.6e-145 517.7 434 61.8
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 1.1e-144 517.3 435 59.8
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.1e-144 517.3 389 66.1
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 1.1e-144 517.3 434 61.8
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.1e-144 517.3 434 61.5
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.8e-143 512.7 434 57.6
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 4.7e-143 511.9 419 61.6
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 8.1e-143 511.1 393 67.2
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 5.8e-141 505.0 430 60.2
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 6.4e-140 501.5 521 52.0
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 1.0e-137 494.2 431 56.6
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 6.6e-137 491.5 422 57.6
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 1.5e-136 490.3 422 58.8
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.5e-136 490.3 414 58.0
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 1.5e-136 490.3 424 59.7
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.1e-134 484.2 418 60.0
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 9.9e-133 477.6 421 57.0
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 1.7e-132 476.9 432 55.8
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 3.8e-132 475.7 434 55.5
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 4.2e-131 472.2 417 57.6
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 1.7e-129 466.8 428 56.1
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 3.9e-129 465.7 420 56.4
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 6.6e-129 464.9 427 54.3
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 1.5e-128 463.8 362 66.0
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 4.3e-128 462.2 406 57.1
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 7.3e-128 461.5 426 55.4
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 1.4e-126 457.2 420 56.0
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 1.4e-126 457.2 420 56.0
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 5.3e-126 455.3 407 57.2
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.2e-125 454.1 420 55.7
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 4.5e-125 452.2 435 54.7
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 5.8e-125 451.8 381 58.8
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 1.3e-124 450.7 358 61.7
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 2.9e-124 449.5 362 60.8
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 9.3e-123 444.5 420 53.8
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 2.2e-116 423.3 422 52.8
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 1.9e-115 420.2 414 53.4
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 3.2e-115 419.5 662 39.6
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 6.7e-113 411.8 376 55.6
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 3.2e-107 392.9 304 65.5
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 5.5e-107 392.1 306 61.8
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 5.3e-102 375.6 421 47.3
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.0e-85 320.5 296 57.4
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 6.3e-79 298.9 476 39.9
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 2.5e-75 287.0 274 54.7
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 1.5e-72 277.7 447 40.5
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.9e-68 263.5 239 58.6
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 2.7e-61 240.4 195 60.5
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 2.8e-58 230.3 216 51.4
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 6.6e-52 209.1 215 50.7
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 3.7e-47 193.4 186 51.6
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 9.2e-46 188.7 150 62.7
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.3e-39 168.3 123 66.7
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 1.7e-39 167.9 113 69.9
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 3.7e-39 166.8 176 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 8.3e-39 165.6 252 42.5
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 2.0e-24 117.9 103 56.3
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 6.9e-17 92.8 98 46.9
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 7.6e-16 89.4 105 46.7
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 9.9e-16 89.0 70 62.9
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 4.6e-13 80.1 125 43.2
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 3.9e-12 77.0 220 28.6
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 1.8e-09 68.2 219 30.1
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 4.5e-08 63.5 50 62.0
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 3.2e-06 57.4 42 64.3


User provided reference genes

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