Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1892 Acer truncatum HOM05D006826 ORTHO05D008404 6.4e-73 277.3 141 100.0
Atru.chr3.138 Acer truncatum HOM05D006826 ORTHO05D008404 2.7e-63 245.4 139 91.4
CiPaw.01G004900 Carya illinoinensis HOM05D006826 ORTHO05D008404 5.5e-16 88.2 124 49.2
Nn1g04562 Nelumbo nucifera HOM05D006826 ORTHO05D008404 2.1e-15 86.3 146 43.8
Thecc.01G072200 Theobroma cacao HOM05D006826 ORTHO05D008404 8.8e-14 80.9 93 53.8
TAR381G0105 Trochodendron aralioides HOM05D006826 ORTHO05D008404 1.1e-13 80.5 140 42.1
Duzib264G1056 Durio zibethinus HOM05D006826 ORTHO05D008404 1.5e-13 80.1 82 54.9
Duzib147G0604 Durio zibethinus HOM05D006826 ORTHO05D008404 2.2e-12 76.3 82 50.0
QL03p006766 Quercus lobata HOM05D006826 ORTHO05D008404 8.2e-12 74.3 134 45.5
Ciclev10025483m.g Citrus clementina HOM05D006826 ORTHO05D008404 1.1e-11 73.9 115 52.2
Cpa.g.sc6.22 Carica papaya HOM05D006826 ORTHO05D008404 4.1e-11 72.0 142 38.0
Aqoxy5G00873 Aquilegia oxysepala HOM05D006826 ORTHO05D008404 9.1e-11 70.9 143 38.5
Cc07_g07060 Coffea canephora HOM05D006826 ORTHO05D008404 1.6e-10 70.1 100 42.0
Migut.L00215 Erythranthe guttata HOM05D006826 ORTHO05D008404 2.0e-10 69.7 144 38.2
CSS0017641 Camellia sinensis var. sinensis HOM05D006826 ORTHO05D008404 3.5e-10 68.9 144 38.9
TWI73G0815 Tripterygium wilfordii HOM05D006826 ORTHO05D008404 3.5e-10 68.9 104 46.2
COL.COLO4_11571 Corchorus olitorius HOM05D006826 ORTHO05D008404 1.3e-09 67.0 118 39.8
GSVIVG01000112001 Vitis vinifera HOM05D006826 ORTHO05D008404 1.3e-09 67.0 144 38.2
PGSC0003DMG400021447 Solanum tuberosum HOM05D006826 ORTHO05D008404 3.8e-09 65.5 118 36.4
CAN.G1075.32 Capsicum annuum HOM05D006826 ORTHO05D008404 6.5e-09 64.7 120 38.3
Gorai.008G083000 Gossypium raimondii HOM05D006826 ORTHO05D008404 8.5e-09 64.3 76 52.6
Gohir.D12G074900 Gossypium hirsutum HOM05D006826 ORTHO05D008404 1.1e-08 63.9 76 52.6
Nitab4.5_0000651g0250 Nicotiana tabacum HOM05D006826 ORTHO05D008404 1.1e-08 63.9 119 38.7
BcaB01g00654 Brassica carinata HOM05D006826 ORTHO05D008404 4.2e-08 62.0 119 37.0
THA.LOC104821220 Tarenaya hassleriana HOM05D006826 ORTHO05D008404 4.2e-08 62.0 91 47.3
Solyc02g092420.4 Solanum lycopersicum HOM05D006826 ORTHO05D008404 5.5e-08 61.6 120 36.7
Gohir.A12G076600 Gossypium hirsutum HOM05D006826 ORTHO05D008404 7.2e-08 61.2 76 51.3
Nitab4.5_0008034g0010 Nicotiana tabacum HOM05D006826 ORTHO05D008404 7.2e-08 61.2 119 37.8
Aa31LG4G18350 Aethionema arabicum HOM05D006826 ORTHO05D008404 9.4e-08 60.8 94 41.5
Lalb_Chr16g0378851 Lupinus albus HOM05D006826 ORTHO05D008404 9.4e-08 60.8 89 47.2
Sopen02g036970 Solanum pennellii HOM05D006826 ORTHO05D008404 9.4e-08 60.8 121 37.2
PGR004G0197 Punica granatum HOM05D006826 ORTHO05D008404 1.2e-07 60.5 88 47.7
Actinidia32839 Actinidia chinensis HOM05D006826 ORTHO05D008404 1.6e-07 60.1 91 41.8
Cfa004128 Carpinus fangiana HOM05D001721 ORTHO05D008404 2.1e-07 59.7 101 48.5
Eucgr.I00707 Eucalyptus grandis HOM05D006826 ORTHO05D008404 2.1e-07 59.7 88 50.0
DCAR_025798 Daucus carota HOM05D006826 ORTHO05D008404 2.7e-07 59.3 99 42.4
Prupe.6G221500 Prunus persica HOM05D006826 ORTHO05D008404 8.0e-07 57.8 110 40.9
Haze_15287 Corylus avellana HOM05D006826 ORTHO05D008404 1.0e-06 57.4 125 41.6
BcaB05g23173 Brassica carinata HOM05D006826 ORTHO05D008404 1.8e-06 56.6 114 39.5
PSO017G0034 Papaver somniferum HOM05D006826 ORTHO05D008404 3.0e-06 55.8 137 36.5
Peaxi162Scf00548g00661 Petunia axillaris HOM05D006826 ORTHO05D008404 5.2e-06 55.1 121 37.2
Sp5g12210 Schrenkiella parvula HOM05D006826 ORTHO05D008404 5.2e-06 55.1 91 41.8


User provided reference genes

Program Settings