Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 1.8e-145 519.2 259 100.0
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 1.8e-105 386.3 206 84.5
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 8.9e-105 384.0 207 82.1
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 5.8e-104 381.3 207 82.6
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 2.2e-103 379.4 207 82.1
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 9.2e-102 374.0 207 81.6
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 6.0e-101 371.3 207 81.2
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 1.0e-100 370.5 207 81.6
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 7.3e-99 364.4 206 80.1
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.2e-98 363.6 208 81.2
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 4.7e-98 361.7 207 78.3
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 6.2e-98 361.3 207 78.3
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 6.2e-98 361.3 208 78.8
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 8.9e-97 357.5 207 77.3
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.5e-96 356.7 208 79.3
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 5.8e-96 354.8 240 70.0
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.9e-94 349.7 207 75.8
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 1.6e-93 346.7 212 75.0
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 5.6e-91 338.2 212 73.6
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.6e-90 336.7 211 73.0
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 3.1e-89 332.4 211 70.1
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 5.3e-89 331.6 207 73.4
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 2.0e-88 329.7 206 72.3
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 2.2e-87 326.2 214 72.0
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 2.1e-85 319.7 211 69.7
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 1.0e-84 317.4 206 68.0
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 1.3e-84 317.0 207 69.6
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.3e-84 317.0 222 67.1
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.7e-84 316.6 208 66.8
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 3.0e-84 315.8 231 66.2
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 6.6e-84 314.7 205 70.2
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.3e-82 310.5 208 67.8
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 6.2e-82 308.1 218 67.0
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 3.1e-81 305.8 207 69.6
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 1.5e-80 303.5 206 64.1
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 2.6e-80 302.8 168 81.0
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 7.6e-80 301.2 201 65.2
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 2.2e-79 299.7 202 66.8
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 2.2e-79 299.7 207 65.2
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 2.1e-77 293.1 200 66.0
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 3.5e-77 292.4 249 58.2
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 5.1e-76 288.5 206 63.1
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 7.4e-75 284.6 214 61.2
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 6.2e-74 281.6 204 63.7
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 4.3e-67 258.8 205 60.0
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 1.3e-66 257.3 207 59.9
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 4.2e-62 242.3 176 59.7
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 4.2e-62 242.3 137 82.5
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 2.3e-60 236.5 122 79.5
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 1.3e-58 230.7 160 66.2
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 2.8e-58 229.6 145 73.1
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 4.1e-57 225.7 124 82.3
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 1.3e-55 220.7 126 73.8
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.1e-51 207.6 244 41.8
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.1e-51 207.6 125 68.8
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.1e-51 207.6 205 48.8
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 2.5e-51 206.5 207 50.2
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.3e-51 206.1 126 69.8
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 4.8e-50 202.2 226 45.1
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.4e-49 200.7 111 76.6
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 2.4e-49 199.9 171 55.0
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 1.5e-48 197.2 123 66.7
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 2.0e-48 196.8 109 77.1
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 4.2e-46 189.1 103 74.8
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 1.5e-43 180.6 107 72.0
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 8.2e-42 174.9 105 74.3
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 3.1e-41 172.9 163 50.9
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 2.0e-40 170.2 86 84.9
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 7.7e-40 168.3 102 77.5
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 2.1e-37 160.2 98 68.4
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 4.7e-37 159.1 122 59.0
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 6.7e-36 155.2 198 40.9
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 2.0e-35 153.7 98 66.3
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 3.3e-35 152.9 192 39.6
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 2.4e-33 146.7 201 39.3
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 4.5e-32 142.5 106 53.8
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 1.5e-27 127.5 78 79.5
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 2.6e-27 126.7 204 39.2
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 9.7e-27 124.8 184 37.5
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 9.1e-25 118.2 190 35.3
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 1.0e-23 114.8 73 64.4
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 5.5e-22 109.0 102 51.0
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 1.2e-21 107.8 208 31.2
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.1e-17 94.7 123 45.5
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 1.6e-16 90.9 63 71.4
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 3.0e-12 76.6 55 69.1
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 2.6e-11 73.6 214 27.6
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 4.4e-11 72.8 46 80.4
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.4e-09 67.8 47 68.1
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 2.4e-09 67.0 50 62.0
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 4.1e-09 66.2 97 44.3
FAN12G3210 Fragaria x ananassa HOM05D007543 ORTHO05D009555 5.4e-09 65.9 37 81.1
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.6e-08 64.3 47 68.1
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 3.5e-08 63.2 97 43.3
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.5e-06 57.8 47 63.8
HPP92_022683 Vanilla planifolia HOM05D007543 ORTHO05D009555 1.9e-06 57.4 131 31.3
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 9.5e-06 55.1 54 50.0
unitig_0.g2249 Utricularia gibba HOM05D007543 ORTHO05D009555 9.5e-06 55.1 54 57.4


User provided reference genes

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