Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1802 Acer truncatum HOM05D006492 ORTHO05D008432 0.0e+00 1280.8 659 100.0
Ciclev10004244m.g Citrus clementina HOM05D006492 ORTHO05D008432 1.8e-274 949.1 660 74.4
Thecc.04G212600 Theobroma cacao HOM05D006492 ORTHO05D008432 6.1e-243 844.3 658 65.7
Duzib212G0418 Durio zibethinus HOM05D006492 ORTHO05D008432 1.2e-235 820.1 659 64.3
Dinv38285 Davidia involucrata HOM05D006492 ORTHO05D008432 2.1e-235 819.3 658 63.5
Potri.003G175300 Populus trichocarpa HOM05D006492 ORTHO05D008432 7.5e-233 810.8 660 63.8
Haze_11549 Corylus avellana HOM05D006492 ORTHO05D008432 1.2e-230 803.5 660 62.0
Potri.001G053000 Populus trichocarpa HOM05D006492 ORTHO05D008432 4.6e-230 801.6 659 62.8
Gorai.006G055600 Gossypium raimondii HOM05D006492 ORTHO05D008432 1.1e-228 797.0 661 61.9
GSVIVG01029042001 Vitis vinifera HOM05D006492 ORTHO05D008432 5.6e-228 794.7 660 62.3
Cfa014875 Carpinus fangiana HOM05D006492 ORTHO05D008432 6.2e-227 791.2 663 60.9
Gohir.D09G053008 Gossypium hirsutum HOM05D006492 ORTHO05D008432 2.3e-226 789.3 661 61.7
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 4.4e-225 785.0 659 62.4
COL.COLO4_34090 Corchorus olitorius HOM05D006492 ORTHO05D008432 9.8e-225 783.9 659 61.2
QL05p063769 Quercus lobata HOM05D006492 ORTHO05D008432 1.3e-224 783.5 660 61.8
CSS0015325 Camellia sinensis var. sinensis HOM05D006492 ORTHO05D008432 2.9e-224 782.3 659 61.0
Prupe.1G060300 Prunus persica HOM05D006492 ORTHO05D008432 1.7e-221 773.1 668 59.9
Manes.15G049000 Manihot esculenta HOM05D006492 ORTHO05D008432 6.2e-219 764.6 655 60.9
CiPaw.01G204100 Carya illinoinensis HOM05D006492 ORTHO05D008432 8.1e-219 764.2 662 58.8
TAR365G0557 Trochodendron aralioides HOM05D006492 ORTHO05D008432 1.4e-218 763.5 666 59.2
TAR365G0379 Trochodendron aralioides HOM05D006492 ORTHO05D008432 5.2e-218 761.5 666 59.0
MD00G1101100 Malus domestica HOM05D006492 ORTHO05D008432 2.7e-214 749.2 668 58.7
TWI09G1643 Tripterygium wilfordii HOM05D006492 ORTHO05D008432 4.7e-211 738.4 660 59.5
Actinidia25080 Actinidia chinensis HOM05D006492 ORTHO05D008432 1.4e-210 736.9 658 59.1
RcHm_v2.0_Chr4g0396881 Rosa chinensis HOM05D006492 ORTHO05D008432 8.4e-208 727.6 665 58.2
Rhsim09G0049200 Rhododendron simsii HOM05D006492 ORTHO05D008432 9.2e-207 724.2 659 58.6
Lju414A5T31 Lonicera japonica HOM05D006492 ORTHO05D008432 2.1e-206 723.0 659 57.1
vmacro00516 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 3.5e-206 722.2 659 58.9
FAN12G2087 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.9e-204 716.5 667 56.4
FAN07G0933 Fragaria x ananassa HOM05D006492 ORTHO05D008432 8.1e-203 711.1 667 56.4
FAN22G2187 Fragaria x ananassa HOM05D006492 ORTHO05D008432 2.2e-200 703.0 667 55.8
Glyma.10G192800 Glycine max HOM05D006492 ORTHO05D008432 3.1e-194 682.6 661 55.4
Oeu051651.1 Olea europaea HOM05D006492 ORTHO05D008432 4.0e-194 682.2 660 53.6
Cpa.g.sc59.86 Carica papaya HOM05D006492 ORTHO05D008432 5.3e-194 681.8 608 57.9
MBI10_g16832_MAGBIO Magnolia biondii HOM05D006492 ORTHO05D008432 3.4e-193 679.1 671 55.4
VMungo0720G0701 Vigna mungo HOM05D006492 ORTHO05D008432 2.2e-192 676.4 660 54.1
Glyma.20G197700 Glycine max HOM05D006492 ORTHO05D008432 8.4e-192 674.5 661 54.2
Lalb_Chr21g0312661 Lupinus albus HOM05D006492 ORTHO05D008432 1.9e-191 673.3 661 53.9
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea HOM05D006492 ORTHO05D008432 9.3e-191 671.0 658 53.3
MSTRG.24638 Avicennia marina HOM05D006492 ORTHO05D008432 4.6e-190 668.7 658 52.7
EL10Ac3g06781 Beta vulgaris HOM05D006492 ORTHO05D008432 4.6e-190 668.7 662 52.3
Phvul.007G134600 Phaseolus vulgaris HOM05D006492 ORTHO05D008432 3.0e-189 666.0 660 53.0
FAN17G1964 Fragaria x ananassa HOM05D006492 ORTHO05D008432 7.4e-188 661.4 667 53.7
CANSAT78G0108 Cannabis sativa HOM05D006492 ORTHO05D008432 1.6e-187 660.2 673 52.5
SalBow3G2597 Salvia bowleyana HOM05D006492 ORTHO05D008432 1.1e-186 657.5 659 51.6
Aqoxy2G03837 Aquilegia oxysepala HOM05D006492 ORTHO05D008432 2.4e-186 656.4 666 53.3
Lj5g0018955 Lotus japonicus HOM05D006492 ORTHO05D008432 1.2e-185 654.1 662 52.4
DCAR_002278 Daucus carota HOM05D006492 ORTHO05D008432 2.5e-183 646.4 683 51.4
Peaxi162Scf00047g01324 Petunia axillaris HOM05D006492 ORTHO05D008432 3.2e-183 646.0 659 51.3
Migut.N00332 Erythranthe guttata HOM05D006492 ORTHO05D008432 4.2e-183 645.6 673 52.2
TPR.G13408 Trifolium pratense HOM05D006492 ORTHO05D008432 2.7e-182 642.9 675 51.1
Nitab4.5_0012325g0010 Nicotiana tabacum HOM05D006492 ORTHO05D008432 4.6e-182 642.1 658 51.1
Eucgr.H00098 Eucalyptus grandis HOM05D006492 ORTHO05D008432 3.9e-181 639.0 653 51.9
Nitab4.5_0000493g0030 Nicotiana tabacum HOM05D006492 ORTHO05D008432 3.9e-181 639.0 658 50.6
PGR142G2376 Punica granatum HOM05D006492 ORTHO05D008432 2.1e-179 633.3 660 51.4
CAN.G1552.5 Capsicum annuum HOM05D006492 ORTHO05D008432 5.3e-178 628.6 659 49.8
Sopen09g034300 Solanum pennellii HOM05D006492 ORTHO05D008432 1.2e-177 627.5 659 49.8
Ca_10406_v3 Cicer arietinum L. HOM05D006492 ORTHO05D008432 4.5e-177 625.5 677 50.8
Medtr1g090050 Medicago truncatula HOM05D006492 ORTHO05D008432 4.5e-177 625.5 675 49.3
Cc03_g07180 Coffea canephora HOM05D006492 ORTHO05D008432 5.8e-177 625.2 663 51.3
AUR62035934 Chenopodium quinoa HOM05D006492 ORTHO05D008432 3.8e-176 622.5 659 49.6
Psat6g170280 Pisum sativum HOM05D006492 ORTHO05D008432 1.9e-175 620.2 677 49.2
Nn1g03104 Nelumbo nucifera HOM05D006492 ORTHO05D008432 4.2e-175 619.0 663 49.6
ECA233G5226 Erigeron canadensis HOM05D006492 ORTHO05D008432 3.0e-173 612.8 651 49.6
Ah.04g153340 Amaranthus hybridus HOM05D006492 ORTHO05D008432 5.1e-173 612.1 664 47.4
Hund24849 Selenicereus undatus HOM05D006492 ORTHO05D008432 3.3e-172 609.4 662 48.3
ClCG05G003620 Citrullus lanatus HOM05D006492 ORTHO05D008432 4.3e-172 609.0 655 49.8
SGA_v2.0_scaffold2G00843 Striga asiatica HOM05D006492 ORTHO05D008432 4.1e-170 602.4 662 49.4
BolC8t46943H Brassica oleracea HOM05D006492 ORTHO05D008432 1.2e-169 600.9 661 48.4
HanXRQChr07g0185861 Helianthus annuus HOM05D006492 ORTHO05D008432 1.2e-169 600.9 651 49.2
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 2.0e-169 600.1 655 49.9
C08p01350 Brassica napus HOM05D006492 ORTHO05D008432 2.9e-168 596.3 661 48.1
Sc14g0004710 Simmondsia chinensis HOM05D006492 ORTHO05D008432 3.2e-167 592.8 660 46.1
CARHR004030 Cardamine hirsuta HOM05D006492 ORTHO05D008432 1.2e-166 590.9 655 48.2
Thhalv10006668m.g Eutrema salsugineum HOM05D006492 ORTHO05D008432 1.4e-165 587.4 661 47.0
THA.LOC104816017 Tarenaya hassleriana HOM05D006492 ORTHO05D008432 1.4e-165 587.4 662 49.8
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 1.5e-164 583.9 661 48.0
AL1G14360 Arabidopsis lyrata HOM05D006492 ORTHO05D008432 2.5e-164 583.2 659 47.3
unitig_899.g15531 Utricularia gibba HOM05D006492 ORTHO05D008432 2.5e-164 583.2 660 46.8
CsaV3_3G011330 Cucumis sativus L. HOM05D006492 ORTHO05D008432 4.3e-164 582.4 655 48.5
BraA08t35581Z Brassica rapa HOM05D006492 ORTHO05D008432 7.4e-164 581.6 661 47.8
AT1G04650 Arabidopsis thaliana HOM05D006492 ORTHO05D008432 3.7e-163 579.3 658 47.3
Carub.0001s0390 Capsella rubella HOM05D006492 ORTHO05D008432 1.3e-160 570.9 655 46.7
MELO3C006341.2 Cucumis melo HOM05D006492 ORTHO05D008432 1.3e-160 570.9 660 47.0
Sed0001454 Sechium edule HOM05D006492 ORTHO05D008432 6.1e-158 562.0 653 47.2
BcaC07g36892 Brassica carinata HOM05D006492 ORTHO05D008432 1.1e-156 557.8 661 46.4
A10p03080 Brassica napus HOM05D006492 ORTHO05D008432 4.5e-153 545.8 657 45.1
CDE04G0311 Ceratophyllum demersum HOM05D006492 ORTHO05D008432 1.4e-151 540.8 659 43.6
Lsat_1_v5_gn_6_62680 Lactuca sativa HOM05D006492 ORTHO05D008432 2.5e-151 540.0 654 45.6
PSO017G3024 Papaver somniferum HOM05D006492 ORTHO05D008432 1.7e-144 517.3 700 44.4
Aa31LG1G20220 Aethionema arabicum HOM05D006492 ORTHO05D008432 5.0e-144 515.8 669 42.0
PSO063G2396 Papaver somniferum HOM05D006492 ORTHO05D008432 8.0e-142 508.4 697 43.9
ATR0787G047 Amborella trichopoda HOM05D006492 ORTHO05D008432 3.0e-141 506.5 678 42.0
BraA10t42581Z Brassica rapa HOM05D006492 ORTHO05D008432 3.1e-138 496.5 584 46.1
vmacro22821 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 1.6e-129 467.6 659 45.7
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 1.5e-127 461.1 678 41.7
Zm00001eb003580 Zea mays HOM05D006492 ORTHO05D008432 3.6e-126 456.4 671 39.0
Os03g0144000 Oryza sativa ssp. japonica HOM05D006492 ORTHO05D008432 3.5e-113 413.3 696 38.1
FvH4_4g05680 Fragaria vesca HOM05D006492 ORTHO05D008432 4.0e-101 373.2 364 53.6
SEGI_21616 Sequoiadendron giganteum HOM05D006492 ORTHO05D008432 2.1e-94 350.9 678 34.1
Solyc09g091370.4 Solanum lycopersicum HOM05D006492 ORTHO05D008432 4.5e-76 290.0 332 47.9
HPP92_025560 Vanilla planifolia HOM05D006492 ORTHO05D008432 2.5e-58 231.1 331 41.7
Pp3c16_18660 Physcomitrium patens HOM05D006492 ORTHO05D008432 5.5e-42 176.8 667 24.1
HPP92_025559 Vanilla planifolia HOM05D006492 ORTHO05D008432 3.9e-40 170.6 269 39.0
SMO117G0361 Selaginella moellendorffii HOM05D006492 ORTHO05D008432 2.8e-38 164.5 614 26.5
C05p02840 Brassica napus HOM05D006492 ORTHO05D008432 4.7e-17 94.0 117 41.9
Mapoly0061s0085 Marchantia polymorpha HOM05D006492 ORTHO05D008432 6.8e-16 90.1 310 24.8
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis HOM05D006492 ORTHO05D008432 1.4e-13 82.4 298 26.5
CBR_g61877 Chara braunii HOM05D006492 ORTHO05D008432 1.2e-09 69.3 713 20.9
BcaC07g36900 Brassica carinata HOM05D006492 ORTHO05D008432 6.1e-09 67.0 77 42.9


User provided reference genes

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