Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1792 Acer truncatum HOM05D000131 ORTHO05D030807 9.7e-34 146.4 80 100.0
Hma1.2p1_0903F.1_g235150 Hydrangea macrophylla HOM05D000131 ORTHO05D000086 1.0e-14 83.2 76 59.2
Dinv29556 Davidia involucrata HOM05D000131 ORTHO05D000086 3.2e-13 78.2 76 57.9
Ciclev10004783m.g Citrus clementina HOM05D000131 ORTHO05D000086 5.5e-13 77.4 78 61.5
TAR636G3395 Trochodendron aralioides HOM05D000131 ORTHO05D000086 2.1e-12 75.5 77 59.7
TWI73G0957 Tripterygium wilfordii HOM05D000131 ORTHO05D000086 4.7e-12 74.3 76 57.9
TAR633G1159 Trochodendron aralioides HOM05D000131 ORTHO05D000086 4.0e-11 71.2 76 56.6
TAR362G0384 Trochodendron aralioides HOM05D000131 ORTHO05D000086 5.2e-11 70.9 76 59.2
Manes.15G048700 Manihot esculenta HOM05D000131 ORTHO05D000086 3.3e-10 68.2 79 54.4
Rhsim09G0049600 Rhododendron simsii HOM05D000131 ORTHO05D000086 4.4e-10 67.8 77 55.8
Sabra03G0128800 Salix brachista HOM05D000131 ORTHO05D000086 9.7e-10 66.6 80 58.8
CSS0013776 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 1.3e-09 66.2 78 55.1
CSS0015200 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 1.3e-09 66.2 78 55.1
Hma1.2p1_1076F.1_g254640 Hydrangea macrophylla HOM05D000131 ORTHO05D000086 1.3e-09 66.2 76 53.9
Potri.003G175900 Populus trichocarpa HOM05D000131 ORTHO05D000086 1.3e-09 66.2 81 59.3
QL06p023258 Quercus lobata HOM05D000131 ORTHO05D000086 1.3e-09 66.2 78 51.3
Potri.001G052300 Populus trichocarpa HOM05D000131 ORTHO05D000086 3.7e-09 64.7 81 56.8
Actinidia39951 Actinidia chinensis HOM05D000131 ORTHO05D000086 6.3e-09 63.9 79 55.7
Manes.03G152600 Manihot esculenta HOM05D000131 ORTHO05D000086 6.3e-09 63.9 79 54.4
Thecc.04G211500 Theobroma cacao HOM05D000131 ORTHO05D000086 1.8e-08 62.4 76 52.6
Actinidia35948 Actinidia chinensis HOM05D000131 ORTHO05D000086 2.4e-08 62.0 78 55.1
TWI09G0887 Tripterygium wilfordii HOM05D000131 ORTHO05D000086 2.4e-08 62.0 77 53.2
Aqoxy2G03808 Aquilegia oxysepala HOM05D000131 ORTHO05D000086 5.3e-08 60.8 78 51.3
Actinidia11391 Actinidia chinensis HOM05D000131 ORTHO05D000086 9.1e-08 60.1 79 53.2
Duzib151G0061 Durio zibethinus HOM05D000131 ORTHO05D000086 9.1e-08 60.1 76 51.3
Oeu006716.3 Olea europaea HOM05D000131 ORTHO05D000086 3.5e-07 58.2 78 48.7
CiPaw.01G126500 Carya illinoinensis HOM05D000131 ORTHO05D000086 4.5e-07 57.8 79 50.6
Duzib212G0632 Durio zibethinus HOM05D000131 ORTHO05D000086 5.9e-07 57.4 77 51.9
Gohir.A09G202300 Gossypium hirsutum HOM05D000131 ORTHO05D000086 7.7e-07 57.0 76 50.0
Gohir.D09G196300 Gossypium hirsutum HOM05D000131 ORTHO05D000086 7.7e-07 57.0 76 50.0
Gorai.006G219800 Gossypium raimondii HOM05D000131 ORTHO05D000086 7.7e-07 57.0 76 50.0
Hund19252 Selenicereus undatus HOM05D000131 ORTHO05D000086 1.0e-06 56.6 62 53.2
Gohir.A10G121300 Gossypium hirsutum HOM05D000131 ORTHO05D000086 1.3e-06 56.2 76 50.0
Oeu022331.1 Olea europaea HOM05D000131 ORTHO05D000086 1.3e-06 56.2 78 47.4
Actinidia37395 Actinidia chinensis HOM05D000131 ORTHO05D030807 1.7e-06 55.8 78 52.6
Nn1g03134 Nelumbo nucifera HOM05D000131 ORTHO05D000086 2.2e-06 55.5 54 59.3
Rhsim02G0053200 Rhododendron simsii HOM05D000131 ORTHO05D000086 2.2e-06 55.5 79 49.4
Haze_11555 Corylus avellana HOM05D000131 ORTHO05D000086 3.8e-06 54.7 77 48.1
Gohir.D10G145000 Gossypium hirsutum HOM05D000131 ORTHO05D000086 3.8e-06 54.7 76 48.7
COL.COLO4_34081 Corchorus olitorius HOM05D000131 ORTHO05D000086 5.0e-06 54.3 53 62.3
Dinv19225 Davidia involucrata HOM05D000131 ORTHO05D000086 5.0e-06 54.3 77 51.9
Haze_24768 Corylus avellana HOM05D000131 ORTHO05D000086 6.5e-06 53.9 77 46.8


User provided reference genes

Program Settings