Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 3.4e-92 341.7 172 100.0
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 1.3e-59 233.4 167 70.1
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.7e-59 233.0 166 71.1
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.6e-57 226.5 166 68.7
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 4.6e-57 224.9 166 66.9
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.0e-56 223.8 165 66.1
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 2.3e-56 222.6 167 65.9
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 2.3e-56 222.6 166 68.1
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 6.6e-56 221.1 167 67.7
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 6.6e-56 221.1 165 69.1
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.5e-55 219.9 166 66.3
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 2.5e-55 219.2 167 65.3
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 2.5e-55 219.2 167 67.1
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 4.3e-55 218.4 167 66.5
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 5.6e-55 218.0 166 66.3
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 9.6e-55 217.2 167 67.1
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 1.6e-54 216.5 166 64.5
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 4.0e-53 211.8 166 65.1
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 5.3e-53 211.5 166 63.3
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 6.9e-53 211.1 166 63.9
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 6.9e-53 211.1 165 64.8
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 9.0e-53 210.7 190 58.4
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.0e-52 209.5 166 65.1
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.6e-52 209.1 172 63.4
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 1.3e-51 206.8 159 67.3
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 2.2e-51 206.1 166 63.9
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 2.2e-51 206.1 165 64.2
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 8.4e-51 204.1 174 63.8
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.4e-50 203.4 166 66.3
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.9e-50 203.0 166 62.7
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 1.2e-49 200.3 165 64.8
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.6e-49 199.9 165 61.2
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 3.5e-49 198.7 161 61.5
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 4.6e-49 198.4 165 61.2
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 6.0e-49 198.0 166 59.6
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 7.9e-49 197.6 177 58.8
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.3e-48 196.8 169 59.8
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.8e-48 196.4 166 59.0
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 1.8e-48 196.4 165 58.2
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.3e-48 196.1 166 59.0
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 5.1e-48 194.9 166 62.7
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 6.7e-48 194.5 165 61.2
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.5e-47 193.4 166 59.6
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 1.5e-47 193.4 166 63.3
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 2.5e-47 192.6 165 56.4
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 3.3e-47 192.2 169 59.8
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 3.3e-47 192.2 168 57.7
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 7.4e-47 191.0 166 56.0
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 9.6e-47 190.7 167 58.7
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.3e-46 190.3 167 61.1
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 1.6e-46 189.9 166 59.0
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.6e-46 189.9 168 60.1
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 1.6e-46 189.9 165 63.0
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 2.1e-46 189.5 159 64.2
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 8.1e-46 187.6 165 60.6
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.8e-45 186.4 166 61.4
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 3.1e-45 185.7 166 57.2
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 3.1e-45 185.7 166 59.0
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 3.1e-45 185.7 166 60.8
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 5.3e-45 184.9 168 58.9
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 6.9e-45 184.5 170 60.0
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 1.2e-44 183.7 166 58.4
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 1.5e-44 183.3 187 55.1
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 2.6e-44 182.6 166 59.0
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 2.6e-44 182.6 164 60.4
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 2.6e-44 182.6 166 56.6
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 5.8e-44 181.4 166 57.8
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 9.9e-44 180.6 166 59.0
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.3e-43 180.3 168 60.7
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 1.7e-43 179.9 170 58.8
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 2.2e-43 179.5 165 58.2
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 3.8e-43 178.7 170 58.2
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 3.8e-43 178.7 170 58.2
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 8.4e-43 177.6 177 57.6
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.1e-42 177.2 166 54.8
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 1.1e-42 177.2 159 58.5
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 2.4e-42 176.0 166 56.0
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 3.2e-42 175.6 178 52.8
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 5.5e-42 174.9 166 56.0
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 7.1e-42 174.5 166 53.6
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 7.1e-42 174.5 166 56.6
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 7.1e-42 174.5 166 56.6
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.6e-41 173.3 165 56.4
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 2.1e-41 172.9 166 57.8
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 2.7e-41 172.6 166 54.2
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 7.9e-41 171.0 174 52.9
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 1.0e-40 170.6 166 56.0
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.3e-40 170.2 166 55.4
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 2.3e-40 169.5 167 56.9
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 3.3e-39 165.6 167 55.1
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 3.3e-39 165.6 165 56.4
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 3.3e-39 165.6 170 55.3
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 1.1e-37 160.6 165 56.4
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 1.8e-37 159.8 166 54.2
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 1.8e-37 159.8 167 53.3
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 3.1e-37 159.1 166 53.6
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 9.0e-37 157.5 167 49.7
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 9.0e-37 157.5 169 52.1
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 1.2e-36 157.1 165 52.7
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.9e-35 152.5 169 53.8
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 4.9e-35 151.8 167 47.9
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 6.5e-35 151.4 165 47.9
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 3.2e-34 149.1 174 50.6
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 2.5e-31 139.4 167 46.7
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 2.6e-28 129.4 176 44.3
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 6.5e-27 124.8 181 40.9
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 3.6e-25 119.0 165 43.0
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 1.0e-24 117.5 167 40.7
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 2.3e-24 116.3 165 41.2
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 8.7e-24 114.4 173 39.9
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 2.8e-22 109.4 127 50.4
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 7.2e-18 94.7 59 74.6
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 2.8e-14 82.8 59 71.2
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 6.9e-13 78.2 84 51.2
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.7e-09 66.2 147 35.4


User provided reference genes

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