Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 2.6e-269 931.4 450 100.0
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 1.3e-215 753.1 446 80.0
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 1.3e-215 753.1 450 80.4
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 3.1e-214 748.4 453 80.8
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 3.5e-213 745.0 448 78.3
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 7.7e-213 743.8 446 79.6
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 1.7e-212 742.7 446 80.0
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 2.9e-212 741.9 447 79.4
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 2.5e-211 738.8 453 78.8
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 3.2e-211 738.4 454 79.3
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 1.5e-208 729.6 442 78.3
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 2.6e-208 728.8 454 76.0
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 3.3e-208 728.4 447 78.7
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 3.3e-208 728.4 452 78.5
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 5.7e-208 727.6 446 78.0
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 9.7e-208 726.9 419 82.3
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 8.2e-207 723.8 446 78.5
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 1.8e-206 722.6 433 79.0
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 2.4e-206 722.2 438 77.6
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 3.1e-206 721.8 430 79.1
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 5.3e-206 721.1 430 79.1
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 9.1e-206 720.3 439 78.4
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 2.0e-205 719.2 453 76.2
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 3.5e-205 718.4 440 78.4
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 2.2e-204 715.7 421 79.3
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 3.8e-204 714.9 450 76.0
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 5.5e-203 711.1 408 82.6
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 9.4e-203 710.3 421 79.3
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.2e-202 709.9 441 78.5
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 4.7e-202 708.0 419 81.1
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 1.0e-201 706.8 420 80.5
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 1.0e-201 706.8 447 75.4
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 6.8e-201 704.1 450 75.6
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 6.8e-201 704.1 510 68.8
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 2.2e-199 699.1 451 75.4
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 3.7e-199 698.4 441 75.1
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 6.3e-199 697.6 423 79.0
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 8.3e-199 697.2 441 74.6
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 5.4e-198 694.5 418 79.2
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 1.2e-197 693.3 420 79.0
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 1.2e-197 693.3 418 79.2
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 1.2e-197 693.3 418 79.2
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 1.0e-196 690.3 420 78.8
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 3.8e-196 688.3 419 78.3
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 6.5e-196 687.6 449 72.8
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 8.6e-196 687.2 418 78.9
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 1.9e-195 686.0 475 71.8
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 5.5e-195 684.5 458 72.9
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 1.6e-194 682.9 450 74.4
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 1.0e-193 680.2 423 76.4
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 2.3e-193 679.1 448 73.0
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 6.8e-193 677.6 420 76.4
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 6.8e-193 677.6 361 88.4
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.5e-192 676.4 467 71.1
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 9.8e-192 673.7 429 76.0
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 1.7e-191 672.9 441 73.5
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 3.7e-191 671.8 444 74.3
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 4.9e-191 671.4 446 73.1
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 4.9e-191 671.4 438 74.0
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 2.3e-185 652.5 593 59.2
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 4.0e-185 651.7 388 79.9
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 9.2e-182 640.6 422 73.5
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 2.0e-181 639.4 552 61.4
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 1.7e-180 636.3 420 73.8
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.1e-179 633.6 446 71.7
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 1.9e-179 632.9 368 81.8
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 2.5e-179 632.5 357 83.2
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 8.9e-177 624.0 422 70.1
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 2.9e-175 619.0 405 74.3
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.6e-173 613.2 449 69.5
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 1.0e-172 610.5 417 72.4
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 1.5e-171 606.7 415 69.4
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 6.8e-169 597.8 378 75.9
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 8.9e-169 597.4 405 69.6
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 1.5e-163 580.1 377 73.5
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 6.2e-162 574.7 343 79.9
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 1.2e-160 570.5 342 78.4
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 2.2e-159 566.2 376 73.7
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 3.2e-158 562.4 317 83.6
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 7.8e-157 557.8 360 75.8
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 5.6e-155 551.6 372 71.0
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 5.6e-155 551.6 385 70.9
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 1.7e-143 513.5 424 62.5
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 1.1e-137 494.2 338 71.0
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 4.2e-134 482.3 284 81.3
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 2.0e-128 463.4 370 62.4
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 4.6e-117 425.6 402 51.5
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 3.3e-115 419.5 403 49.9
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 1.7e-114 417.2 401 49.1
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 2.0e-112 410.2 314 64.0
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 6.1e-109 398.7 405 49.1
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 6.3e-106 388.7 233 78.1
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 2.0e-91 340.5 223 70.9
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 1.1e-86 324.7 200 78.5
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.0e-83 313.9 230 66.1
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 1.2e-69 268.1 427 37.5
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 3.7e-66 256.5 167 73.7
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 2.0e-64 250.8 200 66.0
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 5.2e-60 236.1 404 35.1
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 8.3e-58 228.8 126 86.5
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 8.6e-47 192.2 229 47.6
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 1.1e-41 175.3 432 30.6
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 7.1e-41 172.6 180 45.6
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 6.0e-40 169.5 408 29.9
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 3.6e-37 160.2 126 63.5
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 6.2e-37 159.5 88 84.1
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 3.8e-34 150.2 89 76.4
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 5.4e-33 146.4 116 62.1
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 5.8e-27 126.3 124 49.2
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.3e-23 115.2 72 72.2
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 4.3e-22 110.2 83 67.5
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 3.1e-20 104.0 65 75.4
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 4.6e-16 90.1 56 66.1
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 3.9e-15 87.0 72 54.2
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.1e-14 85.5 45 84.4
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 4.1e-12 77.0 51 68.6
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 5.5e-09 66.6 62 48.4
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 5.1e-07 60.1 37 75.7
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 5.1e-07 60.1 37 75.7
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 3.3e-06 57.4 35 74.3
arahy.Tifrunner.gnm1.ann1.JG4R8Z Arachis hypogaea HOM05D034686 ORTHO05D082558 4.3e-06 57.0 43 60.5


User provided reference genes

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