Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1626 Acer truncatum HOM05D000003 ORTHO05D000006 7.8e-180 633.6 312 100.0
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-33 147.5 125 55.2
Atru.chr6.308 Acer truncatum HOM05D000003 ORTHO05D000006 1.7e-33 147.5 124 54.8
Atru.chr5.2394 Acer truncatum HOM05D000024 ORTHO05D000006 8.4e-33 145.2 125 54.4
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-32 144.8 126 57.1
Atru.chr10.907 Acer truncatum HOM05D000003 ORTHO05D000004 7.1e-32 142.1 316 29.4
Atru.chr3.3701 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-30 137.5 120 56.7
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-30 136.7 124 54.0
Atru.chr2.2596 Acer truncatum HOM05D000003 ORTHO05D000006 3.0e-30 136.7 127 52.8
Atru.chr10.1002 Acer truncatum HOM05D000003 ORTHO05D000006 6.7e-30 135.6 127 49.6
Atru.chr1.2519 Acer truncatum HOM05D000003 ORTHO05D002259 1.5e-29 134.4 126 50.0
Atru.chr3.2964 Acer truncatum HOM05D000003 ORTHO05D000006 9.6e-29 131.7 124 50.8
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 9.0e-27 125.2 153 41.8
Atru.chr7.1397 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-26 122.9 132 47.7
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-25 120.9 110 50.9
Atru.chr2.2565 Acer truncatum HOM05D000003 ORTHO05D000004 4.9e-25 119.4 124 42.7
Atru.chr6.417 Acer truncatum HOM05D000003 ORTHO05D000006 8.4e-25 118.6 127 46.5
Atru.chr1.3579 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-24 116.3 106 52.8
Atru.chr8.961 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-24 116.3 167 44.9
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-22 110.5 127 41.7
Atru.chr2.864 Acer truncatum HOM05D000003 ORTHO05D000006 6.2e-20 102.4 126 38.9
Atru.chr6.601 Acer truncatum HOM05D000003 ORTHO05D000006 1.3e-17 94.7 92 46.7
Atru.chr8.612 Acer truncatum HOM05D000003 ORTHO05D000004 9.3e-16 88.6 279 28.7
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-14 83.2 235 27.2
Hma1.2p1_0057F.1_g032280 Hydrangea macrophylla HOM05D000003 ORTHO05D000006 5.7e-13 79.3 151 27.8
Atru.chr3.2348 Acer truncatum HOM05D000003 ORTHO05D000006 1.6e-12 77.8 72 52.8
Atru.chr2.1981 Acer truncatum HOM05D000003 ORTHO05D000004 4.8e-12 76.3 275 26.2
Atru.chr10.1687 Acer truncatum HOM05D000003 ORTHO05D000004 6.3e-12 75.9 83 43.4
ECA247G0882 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-11 75.1 112 34.8
Atru.chr3.2342 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-11 74.7 127 39.4
ECA233G3171 Erigeron canadensis HOM05D000002 ORTHO05D000004 1.4e-11 74.7 144 33.3
Atru.chr6.307 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-11 73.9 66 51.5
Duzib147G1219 Durio zibethinus HOM05D000003 ORTHO05D000006 4.1e-11 73.2 118 38.1
ECA238G0304 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.1e-11 73.2 177 31.1
Thecc.09G168100 Theobroma cacao HOM05D000003 ORTHO05D000006 4.1e-11 73.2 110 34.5
CSS0019901 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.9e-11 72.4 135 34.8
CSS0038659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.9e-11 72.4 328 22.3
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.0e-11 72.0 112 35.7
Atru.chr6.509 Acer truncatum HOM05D000003 ORTHO05D000004 3.4e-10 70.1 66 53.0
CSS0017637 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.4e-10 70.1 132 31.1
CSS0042274 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.4e-10 70.1 132 31.1
Duzib147G1313 Durio zibethinus HOM05D000003 ORTHO05D000006 3.4e-10 70.1 118 36.4
CSS0041570 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.5e-10 69.7 112 34.8
Thecc.09G223500 Theobroma cacao HOM05D009258 ORTHO05D000006 4.5e-10 69.7 111 33.3
Atru.chr2.3564 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-10 69.3 70 42.9
Atru.chr3.1893 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-10 69.3 66 45.5
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 5.9e-10 69.3 108 31.5
Atru.chr6.713 Acer truncatum HOM05D000003 ORTHO05D000004 7.6e-10 68.9 74 44.6
CSS0015394 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.6e-10 68.9 138 31.9
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.2e-09 67.4 126 34.1
PSO135G0136 Papaver somniferum HOM05D000003 ORTHO05D000006 2.2e-09 67.4 104 32.7
CSS0036010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.9e-09 67.0 108 32.4
Atru.chr2.3068 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-09 66.2 64 48.4
CSS0007116 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.0e-09 66.2 113 36.3
CSS0040117 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.0e-09 66.2 114 31.6
ECA233G5627 Erigeron canadensis HOM05D000003 ORTHO05D000006 5.0e-09 66.2 112 32.1
CSS0004372 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-08 65.1 108 32.4
CSS0010571 Camellia sinensis var. sinensis HOM05D015897 ORTHO05D000004 1.4e-08 64.7 156 29.5
Atru.chr6.162 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-08 64.3 124 35.5
COL.COLO4_08755 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.9e-08 64.3 143 30.8
Aqoxy1G01793 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.5e-08 63.9 121 32.2
CSS0015314 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.5e-08 63.9 129 29.5
ECA246G3232 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.5e-08 63.9 204 25.0
Actinidia24025 Actinidia chinensis HOM05D000003 ORTHO05D000004 3.2e-08 63.5 139 29.5
Atru.chr1.3207 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-08 62.8 66 40.9
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-08 62.8 68 44.1
Atru.chr1.2846 Acer truncatum HOM05D000003 ORTHO05D000004 7.2e-08 62.4 78 39.7
Atru.chr2.3565 Acer truncatum HOM05D000003 ORTHO05D000006 7.2e-08 62.4 94 38.3
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 9.3e-08 62.0 100 33.0
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 9.3e-08 62.0 264 24.2
COL.COLO4_28775 Corchorus olitorius HOM05D008263 ORTHO05D009583 9.3e-08 62.0 153 27.5
HanXRQChr11g0345661 Helianthus annuus HOM05D000003 ORTHO05D000004 9.3e-08 62.0 109 30.3
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 61.6 122 32.0
HanXRQChr08g0227851 Helianthus annuus HOM05D000003 ORTHO05D000004 1.2e-07 61.6 111 31.5
Atru.chr2.258 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-07 61.2 66 42.4
CSS0011923 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.6e-07 61.2 344 21.5
CSS0028753 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.6e-07 61.2 114 33.3
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-07 60.5 97 34.0
Atru.chr6.1051 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-07 60.5 295 23.7
Atru.chr1.2603 Acer truncatum HOM05D000003 ORTHO05D000004 3.6e-07 60.1 64 45.3
Atru.chr10.726 Acer truncatum HOM05D000003 ORTHO05D000004 3.6e-07 60.1 70 42.9
arahy.Tifrunner.gnm1.ann1.A5SCG1 Arachis hypogaea HOM05D000003 ORTHO05D000006 3.6e-07 60.1 112 29.5
CiPaw.02G060000 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.6e-07 60.1 108 31.5
TPR.G36294 Trifolium pratense HOM05D000003 ORTHO05D000004 3.6e-07 60.1 147 29.3
Atru.chr10.1301 Acer truncatum HOM05D000003 ORTHO05D000006 4.6e-07 59.7 100 33.0
Aqoxy3G01491 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.6e-07 59.7 106 31.1
Cpa.g.sc17.126 Carica papaya HOM05D000003 ORTHO05D000006 4.6e-07 59.7 63 44.4
CiPaw.12G097200 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.6e-07 59.7 108 32.4
Atru.chr6.365 Acer truncatum HOM05D000003 ORTHO05D000004 6.1e-07 59.3 66 40.9
CiPaw.05G173100 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.1e-07 59.3 113 28.3
ECA233G1491 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.1e-07 59.3 106 31.1
ECA238G3311 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.9e-07 58.9 156 26.9
QL01p048324 Quercus lobata HOM05D002615 ORTHO05D002913 7.9e-07 58.9 183 27.3
TPR.G18505 Trifolium pratense HOM05D000003 ORTHO05D000004 7.9e-07 58.9 57 43.9
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 58.5 56 50.0
ECA246G1196 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.0e-06 58.5 96 32.3
PSO063G4661 Papaver somniferum HOM05D000003 ORTHO05D000006 1.0e-06 58.5 146 30.1
Potri.003G010697 Populus trichocarpa HOM05D000003 ORTHO05D000006 1.0e-06 58.5 121 29.8
CiPaw.01G225900 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.3e-06 58.2 113 29.2
PSO104G0017 Papaver somniferum HOM05D000003 ORTHO05D000006 1.3e-06 58.2 104 30.8
Atru.chr4.1521 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 57.8 66 40.9
ECA247G3751 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.8e-06 57.8 123 30.9
Atru.chr4.1941 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 57.4 66 40.9
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-06 57.4 76 35.5
PSO541G1122 Papaver somniferum HOM05D000003 ORTHO05D000006 2.3e-06 57.4 166 24.7
Psat5g229160 Pisum sativum HOM05D000003 ORTHO05D000004 2.3e-06 57.4 73 32.9
CiPaw.05G158600 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.0e-06 57.0 109 29.4
AUR62032187 Chenopodium quinoa HOM05D000003 ORTHO05D000006 3.0e-06 57.0 186 21.5
Manes.14G108432 Manihot esculenta HOM05D000003 ORTHO05D000006 3.0e-06 57.0 132 30.3
SGA_v2.0_scaffold18G08392 Striga asiatica HOM05D000003 ORTHO05D000006 3.0e-06 57.0 112 33.9
CSS0005709 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.9e-06 56.6 67 40.3
CSS0013840 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.9e-06 56.6 95 31.6
CiPaw.13G122400 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.9e-06 56.6 113 28.3
Dinv42653 Davidia involucrata HOM05D000003 ORTHO05D000006 3.9e-06 56.6 83 36.1
Manes.07G103102 Manihot esculenta HOM05D000003 ORTHO05D000004 3.9e-06 56.6 133 30.1
TAR532G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000006 3.9e-06 56.6 106 34.0
Atru.chr1.825 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-06 56.2 66 40.9
HanXRQChr07g0206811 Helianthus annuus HOM05D000003 ORTHO05D000004 5.1e-06 56.2 108 27.8
Gohir.A04G039600 Gossypium hirsutum HOM05D000003 ORTHO05D000006 6.7e-06 55.8 99 32.3
HanXRQChr07g0188391 Helianthus annuus HOM05D000003 ORTHO05D000004 6.7e-06 55.8 157 25.5
Manes.05G206250 Manihot esculenta HOM05D000003 ORTHO05D000006 6.7e-06 55.8 133 28.6
SHI36905 Sapria himalayana HOM05D000024 ORTHO05D000006 6.7e-06 55.8 216 26.9
Atru.chr3.1819 Acer truncatum HOM05D000003 ORTHO05D000004 8.7e-06 55.5 66 42.4
CSS0045260 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.7e-06 55.5 173 24.9


User provided reference genes

Program Settings