Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1475 Acer truncatum HOM05D004461 ORTHO05D005543 3.3e-46 188.0 90 100.0
Atru.chr4.1505 Acer truncatum HOM05D004461 ORTHO05D005543 3.3e-46 188.0 90 100.0
Dinv13732 Davidia involucrata HOM05D004461 ORTHO05D005543 1.9e-38 162.2 90 80.0
Dinv33221 Davidia involucrata HOM05D004461 ORTHO05D005543 4.3e-38 161.0 90 81.1
Duzib212G0381 Durio zibethinus HOM05D004461 ORTHO05D005543 4.3e-38 161.0 90 82.2
Prupe.7G266700 Prunus persica HOM05D004461 ORTHO05D005543 9.5e-38 159.8 90 81.1
QL10p057561 Quercus lobata HOM05D004461 ORTHO05D005543 1.2e-37 159.5 89 80.9
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 1.6e-37 159.1 90 81.1
arahy.Tifrunner.gnm1.ann1.XYX0FU Arachis hypogaea HOM05D004461 ORTHO05D005543 1.6e-37 159.1 90 81.1
CSS0001430 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 1.6e-37 159.1 90 83.3
Rhsim09G0007800 Rhododendron simsii HOM05D004461 ORTHO05D005543 1.6e-37 159.1 90 82.2
COL.COLO4_08073 Corchorus olitorius HOM05D004461 ORTHO05D005543 4.7e-37 157.5 90 78.9
Duzib268G0878 Durio zibethinus HOM05D004461 ORTHO05D005543 4.7e-37 157.5 91 82.4
Manes.05G186753 Manihot esculenta HOM05D004461 ORTHO05D005543 4.7e-37 157.5 90 78.9
FAN23G0135 Fragaria x ananassa HOM05D004461 ORTHO05D005543 1.4e-36 156.0 90 80.0
RcHm_v2.0_Chr2g0085161 Rosa chinensis HOM05D004461 ORTHO05D005543 1.4e-36 156.0 90 80.0
Lj4g0007039 Lotus japonicus HOM05D004461 ORTHO05D005543 1.8e-36 155.6 90 75.6
Migut.A00584 Erythranthe guttata HOM05D004461 ORTHO05D005543 5.2e-36 154.1 90 77.8
Lalb_Chr16g0384381 Lupinus albus HOM05D004461 ORTHO05D005543 5.2e-36 154.1 90 76.7
EL10Ac3g06109 Beta vulgaris HOM05D004461 ORTHO05D005543 8.9e-36 153.3 90 76.7
Sc25g0002880 Simmondsia chinensis HOM05D004461 ORTHO05D005543 8.9e-36 153.3 90 75.6
FvH4_1g00530 Fragaria vesca HOM05D004461 ORTHO05D005543 1.2e-35 152.9 90 78.9
Phvul.003G059900 Phaseolus vulgaris HOM05D004461 ORTHO05D005543 1.2e-35 152.9 90 76.7
Thecc.04G163000 Theobroma cacao HOM05D004461 ORTHO05D005543 1.2e-35 152.9 90 77.8
TWI75G0299 Tripterygium wilfordii HOM05D004461 ORTHO05D005543 1.2e-35 152.9 90 77.8
Actinidia18410 Actinidia chinensis HOM05D004461 ORTHO05D005543 1.5e-35 152.5 90 78.9
Cpa.g.sc343.6 Carica papaya HOM05D004461 ORTHO05D005543 1.5e-35 152.5 89 77.5
MD15G1148100 Malus domestica HOM05D004461 ORTHO05D005543 1.5e-35 152.5 90 76.7
SalBow1G4521 Salvia bowleyana HOM05D004461 ORTHO05D005543 1.5e-35 152.5 90 78.9
SalBow1G6497 Salvia bowleyana HOM05D004461 ORTHO05D005543 1.5e-35 152.5 90 78.9
CiPaw.01G169500 Carya illinoinensis HOM05D004461 ORTHO05D005543 2.0e-35 152.1 90 75.6
ECA233G2329 Erigeron canadensis HOM05D004461 ORTHO05D005543 2.6e-35 151.8 90 73.3
MD02G1004400 Malus domestica HOM05D004461 ORTHO05D005543 2.6e-35 151.8 89 77.5
SGA_v2.0_scaffold90G27634 Striga asiatica HOM05D004461 ORTHO05D005543 2.6e-35 151.8 90 78.9
unitig_736.g22475 Utricularia gibba HOM05D004461 ORTHO05D005543 2.6e-35 151.8 90 76.7
Cc03_g14480 Coffea canephora HOM05D004461 ORTHO05D005543 3.4e-35 151.4 90 77.8
FAN28G0648 Fragaria x ananassa HOM05D004461 ORTHO05D005543 3.4e-35 151.4 90 77.8
Nitab4.5_0002660g0040 Nicotiana tabacum HOM05D004461 ORTHO05D005543 4.4e-35 151.0 90 76.7
Gorai.006G232600 Gossypium raimondii HOM05D004461 ORTHO05D005543 5.8e-35 150.6 90 77.8
PSO541G3578 Papaver somniferum HOM05D004461 ORTHO05D005543 5.8e-35 150.6 90 72.2
Glyma.02G138500 Glycine max HOM05D004461 ORTHO05D005543 7.5e-35 150.2 90 74.4
Gohir.A09G213618 Gossypium hirsutum HOM05D004461 ORTHO05D005543 7.5e-35 150.2 90 77.8
VMungo0251G2958 Vigna mungo HOM05D004461 ORTHO05D005543 7.5e-35 150.2 90 74.4
Gohir.D09G212800 Gossypium hirsutum HOM05D004461 ORTHO05D005543 9.8e-35 149.8 90 77.8
PSO675G1807 Papaver somniferum HOM05D004461 ORTHO05D005543 9.8e-35 149.8 90 72.2
CSS0004381 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 1.3e-34 149.4 90 77.8
Ca_18625_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 1.3e-34 149.4 90 74.4
Sopen08g013610 Solanum pennellii HOM05D004461 ORTHO05D005543 1.3e-34 149.4 90 77.8
PGR042G2498 Punica granatum HOM05D004461 ORTHO05D005543 1.7e-34 149.1 85 76.5
BraA09t40637Z Brassica rapa HOM05D004461 ORTHO05D005543 2.2e-34 148.7 90 75.6
AUR62023774 Chenopodium quinoa HOM05D004461 ORTHO05D005543 2.9e-34 148.3 90 73.3
ClCG11G016890 Citrullus lanatus HOM05D004461 ORTHO05D005543 2.9e-34 148.3 90 78.9
Carub.0005s2648 Capsella rubella HOM05D004461 ORTHO05D005543 3.7e-34 147.9 90 75.6
Solyc08g044410.1 Solanum lycopersicum HOM05D004461 ORTHO05D005543 3.7e-34 147.9 90 76.7
A09p52040 Brassica napus HOM05D004461 ORTHO05D005543 4.9e-34 147.5 90 74.4
Glyma.07G206500 Glycine max HOM05D004461 ORTHO05D005543 4.9e-34 147.5 90 72.2
SGA_v2.0_scaffold96G29048 Striga asiatica HOM05D004461 ORTHO05D005543 6.4e-34 147.1 90 76.7
Aa31LG10G14020 Aethionema arabicum HOM05D004461 ORTHO05D005543 1.1e-33 146.4 90 75.6
CsaV3_4G032510 Cucumis sativus L. HOM05D004461 ORTHO05D005543 1.1e-33 146.4 90 77.8
CAN.G1190.30 Capsicum annuum HOM05D004461 ORTHO05D005543 1.4e-33 146.0 90 74.4
Psat7g119400 Pisum sativum HOM05D004461 ORTHO05D005543 1.4e-33 146.0 90 72.2
BcaB02g07448 Brassica carinata HOM05D004461 ORTHO05D005543 1.9e-33 145.6 90 73.3
MSTRG.9726 Avicennia marina HOM05D004461 ORTHO05D005543 2.4e-33 145.2 90 73.3
AUR62002415 Chenopodium quinoa HOM05D004461 ORTHO05D005543 3.2e-33 144.8 90 72.2
MELO3C026365.2 Cucumis melo HOM05D004461 ORTHO05D005543 3.2e-33 144.8 90 76.7
Medtr4g087530 Medicago truncatula HOM05D004461 ORTHO05D005543 3.2e-33 144.8 90 73.3
BcaC07g40502 Brassica carinata HOM05D004461 ORTHO05D005543 4.1e-33 144.4 90 73.3
C08p34720 Brassica napus HOM05D004461 ORTHO05D005543 4.1e-33 144.4 90 73.3
BolC8t51074H Brassica oleracea HOM05D004461 ORTHO05D005543 4.1e-33 144.4 90 73.3
Lju470C15G3 Lonicera japonica HOM05D004461 ORTHO05D005543 4.1e-33 144.4 90 73.3
CANSAT56G3181 Cannabis sativa HOM05D004461 ORTHO05D005543 5.4e-33 144.1 90 72.2
Sp5g03430 Schrenkiella parvula HOM05D004461 ORTHO05D005543 5.4e-33 144.1 90 72.2
BcaC08g45004 Brassica carinata HOM05D004461 ORTHO05D005543 7.0e-33 143.7 90 71.1
A07p24810 Brassica napus HOM05D004461 ORTHO05D005543 7.0e-33 143.7 90 71.1
BolC6t37801H Brassica oleracea HOM05D004461 ORTHO05D005543 7.0e-33 143.7 90 71.1
BraA07t30125Z Brassica rapa HOM05D004461 ORTHO05D005543 9.2e-33 143.3 90 71.1
BcaC07g40444 Brassica carinata HOM05D004461 ORTHO05D005543 1.2e-32 142.9 91 73.6
Hund22530 Selenicereus undatus HOM05D004461 ORTHO05D005543 1.6e-32 142.5 90 73.3
C06p26390 Brassica napus HOM05D004461 ORTHO05D005543 2.7e-32 141.7 90 70.0
Nitab4.5_0000474g0020 Nicotiana tabacum HOM05D004461 ORTHO05D005543 4.6e-32 141.0 84 75.0
Potri.013G128500 Populus trichocarpa HOM05D004461 ORTHO05D005543 6.0e-32 140.6 90 73.3
Eucgr.G01607 Eucalyptus grandis HOM05D004461 ORTHO05D005543 1.0e-31 139.8 90 67.8
Eucgr.L00012 Eucalyptus grandis HOM05D004461 ORTHO05D005543 1.0e-31 139.8 90 67.8
Thhalv10005739m.g Eutrema salsugineum HOM05D004461 ORTHO05D005543 1.0e-31 139.8 87 72.4
ATR0796G101 Amborella trichopoda HOM05D004461 ORTHO05D005543 1.3e-31 139.4 89 68.5
AT3G59770 Arabidopsis thaliana HOM05D004461 ORTHO05D005543 1.3e-31 139.4 90 71.1
Nn1g03496 Nelumbo nucifera HOM05D004461 ORTHO05D005543 1.3e-31 139.4 90 71.1
Lsat_1_v5_gn_7_77561 Lactuca sativa HOM05D004461 ORTHO05D005543 2.3e-31 138.7 91 67.0
AL5G41810 Arabidopsis lyrata HOM05D004461 ORTHO05D005543 3.9e-31 137.9 89 71.9
Sabra13G0107300 Salix brachista HOM05D004461 ORTHO05D005543 6.6e-31 137.1 90 71.1
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 1.5e-30 136.0 86 70.9
TAR623G0001 Trochodendron aralioides HOM05D004461 ORTHO05D005543 1.5e-30 136.0 90 71.1
DCAR_005452 Daucus carota HOM05D004461 ORTHO05D005543 1.9e-30 135.6 90 66.7
HanXRQChr04g0109651 Helianthus annuus HOM05D004461 ORTHO05D005543 4.3e-30 134.4 91 68.1
Haze_00857 Corylus avellana HOM05D004461 ORTHO05D005543 7.3e-30 133.7 91 70.3
GSVIVG01038186001 Vitis vinifera HOM05D004461 ORTHO05D005543 2.8e-29 131.7 90 65.6
Aqoxy1G02097 Aquilegia oxysepala HOM05D004461 ORTHO05D005543 4.0e-28 127.9 88 67.0
CARHR170110 Cardamine hirsuta HOM05D004461 ORTHO05D005543 4.0e-28 127.9 83 68.7
SEGI_23669 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 1.5e-27 125.9 90 61.1
Nn1g07161 Nelumbo nucifera HOM05D004461 ORTHO05D005543 9.9e-27 123.2 90 66.7
HPP92_017806 Vanilla planifolia HOM05D004461 ORTHO05D005543 3.2e-25 118.2 89 61.8
Lsat_1_v5_gn_1_74200 Lactuca sativa HOM05D004461 ORTHO05D005543 7.1e-25 117.1 89 56.2
HanXRQChr01g0023421 Helianthus annuus HOM05D004461 ORTHO05D005543 9.2e-25 116.7 90 56.7
Gohir.D02G008532 Gossypium hirsutum HOM05D004461 ORTHO05D005543 1.3e-23 112.8 84 63.1
Zm00001eb208570 Zea mays HOM05D004461 ORTHO05D005543 1.3e-23 112.8 90 61.1
CDE04G2300 Ceratophyllum demersum HOM05D004461 ORTHO05D005543 6.6e-23 110.5 90 52.2
Gorai.005G010100 Gossypium raimondii HOM05D004461 ORTHO05D005543 6.6e-23 110.5 74 68.9
Os01g0355600 Oryza sativa ssp. japonica HOM05D004461 ORTHO05D005543 6.6e-23 110.5 91 61.5
ECA248G0881 Erigeron canadensis HOM05D004461 ORTHO05D005543 1.9e-22 109.0 89 59.6
Gohir.A02G008301 Gossypium hirsutum HOM05D004461 ORTHO05D005543 4.3e-22 107.8 84 61.9
FAN26G3123 Fragaria x ananassa HOM05D004461 ORTHO05D005543 1.9e-17 92.4 51 80.4
Pp3c2_24100 Physcomitrium patens HOM05D004461 ORTHO05D005543 2.1e-16 89.0 87 47.1
SMO165G0142 Selaginella moellendorffii HOM05D004461 ORTHO05D005543 1.0e-15 86.7 89 44.9
Mapoly0056s0107 Marchantia polymorpha HOM05D004461 ORTHO05D005543 2.3e-15 85.5 89 43.8
Ciclev10020582m.g Citrus clementina HOM05D002050 ORTHO05D001949 3.8e-10 68.2 44 72.7
BcaB02g08211 Brassica carinata HOM05D021787 ORTHO05D005543 9.3e-09 63.5 79 43.0
AagrBONN_evm.TU.Sc2ySwM_362.1413 Anthoceros agrestis HOM05D004461 ORTHO05D005543 1.2e-08 63.2 74 39.2
CBR_g55037 Chara braunii HOM05D004461 ORTHO05D005543 2.1e-08 62.4 87 33.3


User provided reference genes

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