Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1481 Acer truncatum HOM05D007607 ORTHO05D009603 3.4e-52 208.4 133 100.0
Atru.chr4.1510 Acer truncatum HOM05D007607 ORTHO05D009603 1.4e-50 203.0 133 98.5
Ciclev10022842m.g Citrus clementina HOM05D007607 ORTHO05D009603 9.1e-21 104.0 134 60.4
PGR142G0203 Punica granatum HOM05D007607 ORTHO05D009603 4.7e-17 91.7 86 69.8
Actinidia28975 Actinidia chinensis HOM05D007607 ORTHO05D009603 1.4e-16 90.1 127 48.8
GSVIVG01038189001 Vitis vinifera HOM05D007607 ORTHO05D009603 2.3e-16 89.4 136 54.4
Potri.013G128700 Populus trichocarpa HOM05D007607 ORTHO05D009603 4.0e-16 88.6 134 55.2
Cfa015274 Carpinus fangiana HOM05D007607 ORTHO05D009603 5.2e-16 88.2 136 47.8
Haze_01353 Corylus avellana HOM05D007607 ORTHO05D009603 6.8e-16 87.8 137 54.0
Manes.05G131900 Manihot esculenta HOM05D007607 ORTHO05D009603 1.2e-15 87.0 137 53.3
Lsat_1_v5_gn_8_9141 Lactuca sativa HOM05D007607 ORTHO05D009603 2.0e-15 86.3 129 53.5
Dinv18311 Davidia involucrata HOM05D007607 ORTHO05D009603 3.4e-15 85.5 88 71.6
QL10p057428 Quercus lobata HOM05D007607 ORTHO05D009603 4.4e-15 85.1 109 59.6
EL10Ac3g06110 Beta vulgaris HOM05D007607 ORTHO05D009603 7.5e-15 84.3 91 64.8
Thecc.04G162800 Theobroma cacao HOM05D007607 ORTHO05D009603 9.8e-15 84.0 137 53.3
CiPaw.01G169900 Carya illinoinensis HOM05D007607 ORTHO05D009603 2.2e-14 82.8 130 52.3
Sed0020904 Sechium edule HOM05D007607 ORTHO05D009603 6.3e-14 81.3 87 58.6
QL10p057723 Quercus lobata HOM05D007607 ORTHO05D009603 8.3e-14 80.9 109 58.7
CANSAT56G1551 Cannabis sativa HOM05D007607 ORTHO05D009603 1.4e-13 80.1 136 45.6
HanXRQChr02g0059081 Helianthus annuus HOM05D007607 ORTHO05D009603 1.4e-13 80.1 104 62.5
Duzib212G0637 Durio zibethinus HOM05D007607 ORTHO05D009603 3.2e-13 79.0 82 64.6
Cc03_g14540 Coffea canephora HOM05D007607 ORTHO05D009603 4.1e-13 78.6 110 52.7
MD15G1147800 Malus domestica HOM05D007607 ORTHO05D009603 4.1e-13 78.6 144 57.6
MD02G1004100 Malus domestica HOM05D007607 ORTHO05D009603 5.4e-13 78.2 109 55.0
RhsimUnG0015300 Rhododendron simsii HOM05D007607 ORTHO05D009603 5.4e-13 78.2 104 57.7
ClCG11G013470 Citrullus lanatus HOM05D007607 ORTHO05D009603 9.2e-13 77.4 138 47.1
Prupe.7G267000 Prunus persica HOM05D007607 ORTHO05D009603 9.2e-13 77.4 150 56.0
CiPaw.02G100000 Carya illinoinensis HOM05D007607 ORTHO05D009603 1.2e-12 77.0 139 49.6
A07p15130 Brassica napus HOM05D007607 ORTHO05D009603 1.6e-12 76.6 84 63.1
FvH4_1g00500 Fragaria vesca HOM05D007607 ORTHO05D009603 2.0e-12 76.3 134 50.7
BcaC06g34863 Brassica carinata HOM05D007607 ORTHO05D009603 2.7e-12 75.9 84 61.9
BolC7t42778H Brassica oleracea HOM05D007607 ORTHO05D009603 2.7e-12 75.9 84 61.9
ECA233G0487 Erigeron canadensis HOM05D007607 ORTHO05D009603 2.7e-12 75.9 85 54.1
arahy.Tifrunner.gnm1.ann1.RJI6AK Arachis hypogaea HOM05D007607 ORTHO05D009603 3.5e-12 75.5 86 62.8
Rhsim02G0085800 Rhododendron simsii HOM05D007607 ORTHO05D009603 3.5e-12 75.5 104 58.7
MSTRG.24562 Avicennia marina HOM05D007607 ORTHO05D009603 5.9e-12 74.7 75 73.3
CARHR021860 Cardamine hirsuta HOM05D007607 ORTHO05D009603 1.0e-11 73.9 85 63.5
CsaV3_5G030090 Cucumis sativus L. HOM05D007607 ORTHO05D009603 1.3e-11 73.6 113 51.3
Gohir.D10G121500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 1.3e-11 73.6 129 48.1
Gorai.011G133600 Gossypium raimondii HOM05D007607 ORTHO05D009603 1.3e-11 73.6 129 48.1
BcaB03g14267 Brassica carinata HOM05D007607 ORTHO05D009603 1.7e-11 73.2 84 61.9
Gohir.A10G145500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 2.3e-11 72.8 129 48.1
Lj4g0023803 Lotus japonicus HOM05D007607 ORTHO05D009603 2.3e-11 72.8 81 60.5
Cpa.g.sc343.4 Carica papaya HOM05D007607 ORTHO05D009603 2.9e-11 72.4 134 47.8
MELO3C011848.2 Cucumis melo HOM05D007607 ORTHO05D009603 2.9e-11 72.4 88 60.2
Hund12359 Selenicereus undatus HOM05D007607 ORTHO05D009603 2.9e-11 72.4 78 65.4
THA.LOC104813690 Tarenaya hassleriana HOM05D007607 ORTHO05D009603 2.9e-11 72.4 82 67.1
C07p22190 Brassica napus HOM05D007607 ORTHO05D009603 3.9e-11 72.0 84 60.7
BraA06t24849Z Brassica rapa HOM05D007607 ORTHO05D009603 3.9e-11 72.0 86 61.6
CAN.G1237.5 Capsicum annuum HOM05D007607 ORTHO05D009603 5.0e-11 71.6 78 61.5
C05p20400 Brassica napus HOM05D007607 ORTHO05D009603 6.6e-11 71.2 87 59.8
Eucgr.H00285 Eucalyptus grandis HOM05D007607 ORTHO05D009603 6.6e-11 71.2 83 65.1
PSO017G0391 Papaver somniferum HOM05D007607 ORTHO05D009603 6.6e-11 71.2 106 47.2
A06p17530 Brassica napus HOM05D007607 ORTHO05D009603 8.6e-11 70.9 86 60.5
DCAR_005451 Daucus carota HOM05D007607 ORTHO05D009603 8.6e-11 70.9 82 57.3
Peaxi162Scf00883g00099 Petunia axillaris HOM05D007607 ORTHO05D009603 8.6e-11 70.9 78 64.1
TWI15G0968 Tripterygium wilfordii HOM05D007607 ORTHO05D009603 8.6e-11 70.9 132 44.7
Glyma.07G206400 Glycine max HOM05D007607 ORTHO05D009603 1.1e-10 70.5 83 63.9
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 1.5e-10 70.1 94 45.7
RcHm_v2.0_Chr2g0085131 Rosa chinensis HOM05D007607 ORTHO05D009603 1.5e-10 70.1 134 50.7
Thhalv10009074m.g Eutrema salsugineum HOM05D007607 ORTHO05D009603 1.9e-10 69.7 78 61.5
SalBow6G6796 Salvia bowleyana HOM05D007607 ORTHO05D009603 1.9e-10 69.7 77 63.6
Sc13g0006620 Simmondsia chinensis HOM05D007607 ORTHO05D009603 1.9e-10 69.7 89 49.4
BcaB07g32146 Brassica carinata HOM05D007607 ORTHO05D009603 3.3e-10 68.9 85 62.4
PSO675G5570 Papaver somniferum HOM05D007607 ORTHO05D009603 3.3e-10 68.9 77 55.8
MSTRG.22043 Avicennia marina HOM05D007607 ORTHO05D009603 4.3e-10 68.6 95 60.0
AUR62002416 Chenopodium quinoa HOM05D007607 ORTHO05D009603 4.3e-10 68.6 80 56.2
Glyma.02G138600 Glycine max HOM05D007607 ORTHO05D009603 4.3e-10 68.6 80 63.8
Lalb_Chr16g0384371 Lupinus albus HOM05D007607 ORTHO05D009603 4.3e-10 68.6 105 53.3
Aa31LG7G5390 Aethionema arabicum HOM05D007607 ORTHO05D009603 5.6e-10 68.2 77 66.2
Sp1g19030 Schrenkiella parvula HOM05D007607 ORTHO05D009603 5.6e-10 68.2 80 62.5
Sopen12g009810 Solanum pennellii HOM05D007607 ORTHO05D009603 5.6e-10 68.2 84 58.3
BcaC05g26059 Brassica carinata HOM05D007607 ORTHO05D009603 7.3e-10 67.8 87 58.6
BolC5t30734H Brassica oleracea HOM05D007607 ORTHO05D009603 7.3e-10 67.8 87 58.6
Solyc12g019550.2 Solanum lycopersicum HOM05D007607 ORTHO05D009603 9.5e-10 67.4 84 57.1
Ah.13g073390 Amaranthus hybridus HOM05D007607 ORTHO05D009603 1.6e-09 66.6 45 77.8
CSS0042213 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 1.6e-09 66.6 77 61.0
Migut.N03053 Erythranthe guttata HOM05D007607 ORTHO05D009603 2.1e-09 66.2 95 55.8
TAR362G0213 Trochodendron aralioides HOM05D007607 ORTHO05D009603 2.1e-09 66.2 80 65.0
CSS0037895 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 3.6e-09 65.5 77 61.0
PGSC0003DMG400029159 Solanum tuberosum HOM05D007607 ORTHO05D009603 3.6e-09 65.5 84 57.1
Carub.0001s2092 Capsella rubella HOM05D007607 ORTHO05D009603 4.7e-09 65.1 78 60.3
AUR62023773 Chenopodium quinoa HOM05D007607 ORTHO05D009603 1.0e-08 63.9 81 60.5
AL1G34640 Arabidopsis lyrata HOM05D007607 ORTHO05D009603 1.4e-08 63.5 85 57.6
Zm00001eb318610 Zea mays HOM05D007607 ORTHO05D009603 1.4e-08 63.5 37 91.9
Psat7g119360 Pisum sativum HOM05D007607 ORTHO05D009603 4.0e-08 62.0 77 63.6
Nn7g37525 Nelumbo nucifera HOM05D007607 ORTHO05D009603 5.2e-08 61.6 43 76.7
unitig_22.g5705 Utricularia gibba HOM05D007607 ORTHO05D009603 5.2e-08 61.6 98 53.1
Aqoxy2G03795 Aquilegia oxysepala HOM05D007607 ORTHO05D009603 6.8e-08 61.2 132 40.9
AT1G21500 Arabidopsis thaliana HOM05D007607 ORTHO05D009603 6.8e-08 61.2 85 55.3
MBI10_g16327_MAGBIO Magnolia biondii HOM05D007607 ORTHO05D009603 6.8e-08 61.2 38 81.6
Os09g0517000 Oryza sativa ssp. japonica HOM05D007607 ORTHO05D009603 1.2e-07 60.5 38 84.2
Nitab4.5_0000575g0080 Nicotiana tabacum HOM05D007607 ORTHO05D009603 1.5e-07 60.1 88 56.8
Nitab4.5_0008331g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.0e-07 59.7 102 49.0
VMungo0251G2348 Vigna mungo HOM05D007607 ORTHO05D009603 2.0e-07 59.7 80 58.8
TPR.G23536 Trifolium pratense HOM05D007607 ORTHO05D009603 4.4e-07 58.5 77 61.0
Medtr4g087540 Medicago truncatula HOM05D007607 ORTHO05D009603 1.7e-06 56.6 85 56.5


User provided reference genes

Program Settings