Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1402 Acer truncatum HOM05D005198 ORTHO05D006839 7.4e-155 550.4 267 100.0
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 1.5e-144 516.2 252 99.2
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 2.7e-128 462.2 262 82.8
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 6.1e-125 451.1 255 81.6
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 1.5e-123 446.4 262 80.5
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 4.4e-123 444.9 262 79.0
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 5.7e-123 444.5 262 78.6
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 9.8e-123 443.7 262 77.5
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 1.3e-122 443.4 262 79.0
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 1.7e-122 443.0 254 81.9
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 2.8e-122 442.2 255 78.4
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 3.7e-122 441.8 262 80.2
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 1.8e-121 439.5 262 76.7
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 4.1e-121 438.3 262 77.5
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 4.1e-121 438.3 258 78.3
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 1.6e-120 436.4 262 78.2
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 2.7e-120 435.6 256 81.2
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 3.5e-120 435.3 256 80.9
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 5.9e-120 434.5 262 78.2
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 5.9e-120 434.5 255 80.8
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 7.7e-120 434.1 262 76.3
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 7.7e-120 434.1 256 80.9
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 1.0e-119 433.7 262 76.7
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 1.1e-118 430.3 255 77.3
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 1.5e-118 429.9 255 79.2
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 1.9e-118 429.5 262 76.0
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 5.5e-118 427.9 256 80.5
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 2.1e-117 426.0 256 79.7
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 2.8e-117 425.6 262 77.1
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 6.1e-117 424.5 255 75.7
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 1.8e-116 422.9 255 75.7
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 4.0e-116 421.8 255 77.3
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 5.2e-116 421.4 255 77.3
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 2.0e-115 419.5 254 77.2
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 3.4e-115 418.7 254 78.7
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 5.7e-115 417.9 262 74.8
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 5.7e-115 417.9 255 74.1
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 7.5e-115 417.5 254 77.2
MBI11_g23940_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 2.2e-114 416.0 250 77.2
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 3.7e-114 415.2 262 71.8
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 4.9e-114 414.8 257 73.5
CSS0050366 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 1.1e-113 413.7 262 76.7
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 1.8e-113 412.9 264 75.0
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 7.0e-113 411.0 250 78.0
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 2.7e-112 409.1 255 77.6
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 1.3e-111 406.8 261 70.9
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 2.3e-111 406.0 263 72.6
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 2.3e-111 406.0 262 73.3
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 8.6e-111 404.1 262 72.5
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 1.5e-110 403.3 262 73.3
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 2.5e-110 402.5 261 72.4
Lalb_Chr16g0384461 Lupinus albus HOM05D005198 ORTHO05D006839 2.5e-110 402.5 262 72.5
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 3.3e-110 402.1 262 71.8
Sc25g0002780 Simmondsia chinensis HOM05D005198 ORTHO05D006839 5.6e-110 401.4 255 73.7
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 1.2e-109 400.2 262 72.1
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 1.6e-109 399.8 262 71.0
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 2.1e-109 399.4 263 73.4
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 2.1e-109 399.4 257 71.6
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 2.8e-109 399.1 257 70.4
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 2.8e-109 399.1 262 73.3
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 3.6e-109 398.7 258 72.1
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 3.6e-109 398.7 257 71.6
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 6.2e-109 397.9 261 71.3
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 8.0e-109 397.5 257 70.0
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.0e-108 397.1 256 73.4
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 1.8e-108 396.4 262 71.0
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 2.3e-108 396.0 257 71.2
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 5.2e-108 394.8 250 74.0
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 8.9e-108 394.0 262 71.0
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 1.5e-107 393.3 262 69.1
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.5e-107 393.3 256 72.3
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.5e-107 393.3 254 73.2
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 4.4e-107 391.7 254 72.4
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 5.8e-107 391.3 254 72.8
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 9.8e-107 390.6 257 69.3
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 1.7e-106 389.8 262 69.8
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 2.9e-106 389.0 262 68.7
unitig_92.g28215 Utricularia gibba HOM05D005198 ORTHO05D006839 1.1e-105 387.1 244 73.4
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 2.4e-105 386.0 262 70.6
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 4.1e-105 385.2 247 73.3
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 1.2e-104 383.6 263 69.2
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 4.6e-104 381.7 262 67.9
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 4.6e-104 381.7 255 70.2
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 6.0e-104 381.3 258 68.6
EL10Ac3g06083 Beta vulgaris HOM05D005198 ORTHO05D006839 7.8e-104 380.9 262 68.7
DCAR_027527 Daucus carota HOM05D005198 ORTHO05D006839 1.3e-103 380.2 255 69.8
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 1.7e-103 379.8 258 68.2
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 3.9e-103 378.6 258 68.2
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 3.6e-101 372.1 284 66.5
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 6.2e-101 371.3 258 67.1
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 3.7e-98 362.1 256 66.0
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 6.0e-96 354.8 208 81.2
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 3.1e-92 342.4 257 59.1
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 5.4e-89 331.6 259 62.5
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 1.7e-87 326.6 207 72.9
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 2.5e-86 322.8 253 63.2
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.2e-85 320.5 194 76.3
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 7.6e-83 311.2 247 61.1
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 3.6e-77 292.4 255 53.7
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 3.4e-75 285.8 256 53.9
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 1.6e-69 266.9 265 47.5
AagrBONN_evm.TU.Sc2ySwM_228.1363 Anthoceros agrestis HOM05D005198 ORTHO05D006839 4.5e-67 258.8 257 49.4
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 2.7e-64 249.6 254 46.1
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 3.0e-63 246.1 136 84.6
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 6.7e-63 245.0 134 88.1
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 3.2e-57 226.1 130 83.1
Ca_25383_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 1.1e-54 217.6 142 75.4
CAN.G256.23 Capsicum annuum HOM05D005198 ORTHO05D006839 5.9e-51 205.3 145 62.1
Ca_18641_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 2.3e-47 193.4 128 66.4
SHI30330 Sapria himalayana HOM05D000105 ORTHO05D000023 3.9e-47 192.6 196 49.5
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 5.1e-39 165.6 116 65.5
PRCOL_00000684 Prasinoderma coloniale HOM05D005198 ORTHO05D006839 1.1e-38 164.5 226 38.1
MCO01G167 Micromonas commoda HOM05D005198 ORTHO05D006839 1.6e-32 144.1 231 32.9
BolC3t18675H Brassica oleracea HOM05D005198 ORTHO05D006839 1.5e-30 137.5 101 63.4
SEGI_27162 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 2.6e-30 136.7 123 48.8
Cre08.g375900 Chlamydomonas reinhardtii HOM05D005198 ORTHO05D006839 4.1e-28 129.4 261 31.0
Nitab4.5_0009616g0020 Nicotiana tabacum HOM05D005198 ORTHO05D006839 2.0e-27 127.1 66 93.9
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 5.2e-23 112.5 68 76.5
MBI14_g40932_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 5.3e-20 102.4 59 79.7
Psat1g217120 Pisum sativum HOM05D005198 ORTHO05D006839 2.0e-19 100.5 66 66.7
COL.COLO4_29149 Corchorus olitorius HOM05D005198 ORTHO05D006839 7.2e-17 92.0 198 33.3
MBI11_g30564_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 3.6e-16 89.7 50 82.0
Dinv33202 Davidia involucrata HOM05D005198 ORTHO05D006839 3.0e-15 86.7 48 77.1
Glyma.03G132500 Glycine max HOM05D005198 ORTHO05D006839 6.8e-15 85.5 74 56.8
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 4.8e-13 79.3 39 92.3
BraA02t06891Z Brassica rapa HOM05D005198 ORTHO05D040308 4.0e-07 59.7 58 46.6
MBI07_g28641_MAGBIO Magnolia biondii HOM05D000992 ORTHO05D001928 8.8e-07 58.5 30 86.7
A02p18520 Brassica napus HOM05D005198 ORTHO05D040308 5.7e-06 55.8 37 59.5


User provided reference genes

Program Settings