Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 3.7e-86 321.6 176 100.0
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 1.0e-59 233.8 158 86.1
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 1.7e-27 126.7 173 50.3
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 3.3e-26 122.5 170 47.6
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.4e-21 106.3 170 44.1
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 2.0e-15 86.7 144 45.8
Thecc.09G294000 Theobroma cacao HOM05D010298 ORTHO05D012539 7.6e-15 84.7 111 44.1
Thecc.09G294100 Theobroma cacao HOM05D010298 ORTHO05D012539 9.9e-15 84.3 111 42.3
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.9e-14 82.8 94 53.2
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 3.8e-14 82.4 153 39.9
Gorai.006G107900 Gossypium raimondii HOM05D010298 ORTHO05D012539 2.4e-13 79.7 182 35.2
Gohir.A09G091466 Gossypium hirsutum HOM05D010298 ORTHO05D012539 1.2e-12 77.4 180 33.3
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 1.2e-12 77.4 132 43.2
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 2.7e-12 76.3 113 41.6
Gohir.D09G091480 Gossypium hirsutum HOM05D010298 ORTHO05D012539 3.5e-12 75.9 170 35.3
COL.COLO4_28375 Corchorus olitorius HOM05D010298 ORTHO05D012539 1.0e-11 74.3 141 38.3
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.3e-11 73.9 159 37.7
Gohir.A09G086300 Gossypium hirsutum HOM05D010298 ORTHO05D012539 1.8e-11 73.6 145 37.2
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 3.9e-11 72.4 105 42.9
Atru.chr4.1329 Acer truncatum HOM05D010635 ORTHO05D006336 6.7e-11 71.6 85 55.3
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 6.7e-11 71.6 153 36.6
Gohir.D03G141000 Gossypium hirsutum HOM05D010298 ORTHO05D012539 8.7e-11 71.2 176 32.4
Gorai.003G147800 Gossypium raimondii HOM05D010298 ORTHO05D012539 8.7e-11 71.2 176 32.4
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.1e-10 70.9 100 45.0
Gohir.A03G027600 Gossypium hirsutum HOM05D010298 ORTHO05D012539 1.1e-10 70.9 159 34.6
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.5e-10 70.5 113 44.2
Gohir.D09G086380 Gossypium hirsutum HOM05D010298 ORTHO05D012539 1.9e-10 70.1 145 37.9
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 3.3e-10 69.3 129 37.2
Gorai.006G102700 Gossypium raimondii HOM05D010298 ORTHO05D012539 4.3e-10 68.9 145 37.2
Potri.017G021796 Populus trichocarpa HOM05D010635 ORTHO05D006336 4.3e-10 68.9 125 43.2
Gohir.A03G027800 Gossypium hirsutum HOM05D010298 ORTHO05D012539 7.4e-10 68.2 176 32.4
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 7.4e-10 68.2 168 33.3
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 9.6e-10 67.8 127 34.6
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 9.6e-10 67.8 105 42.9
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 1.3e-09 67.4 154 35.1
Gohir.D09G091460 Gossypium hirsutum HOM05D010298 ORTHO05D012539 1.6e-09 67.0 145 36.6
Gorai.006G107800 Gossypium raimondii HOM05D010298 ORTHO05D012539 1.6e-09 67.0 145 36.6
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.6e-09 67.0 131 38.9
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 1.6e-09 67.0 122 39.3
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.1e-09 66.6 100 43.0
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.8e-09 66.2 159 37.1
Gohir.D09G086340 Gossypium hirsutum HOM05D010298 ORTHO05D012539 4.8e-09 65.5 141 34.0
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 4.8e-09 65.5 164 32.9
Potri.017G018901 Populus trichocarpa HOM05D010635 ORTHO05D006336 6.2e-09 65.1 114 41.2
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-08 64.3 103 44.7
Sabra07G0120000 Salix brachista HOM05D010635 ORTHO05D006336 1.8e-08 63.5 140 34.3
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 3.1e-08 62.8 132 34.1
Gorai.006G102600 Gossypium raimondii HOM05D010298 ORTHO05D012539 3.1e-08 62.8 138 35.5
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 3.1e-08 62.8 110 40.0
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 5.3e-08 62.0 134 38.1
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 5.3e-08 62.0 134 38.1
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 6.9e-08 61.6 164 34.8
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 6.9e-08 61.6 146 32.2
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 1.2e-07 60.8 171 35.1
COL.COLO4_19264 Corchorus olitorius HOM05D010298 ORTHO05D012539 1.2e-07 60.8 126 33.3
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 1.5e-07 60.5 114 36.0
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 2.0e-07 60.1 105 41.0
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.6e-07 59.7 138 31.9
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 2.6e-07 59.7 146 33.6
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 3.4e-07 59.3 105 41.0
Sabra07G0119900 Salix brachista HOM05D010635 ORTHO05D006336 3.4e-07 59.3 165 34.5
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 5.8e-07 58.5 119 37.0
Gohir.D09G091420 Gossypium hirsutum HOM05D010298 ORTHO05D012539 5.8e-07 58.5 141 35.5
Sabra07G0108100 Salix brachista HOM05D010635 ORTHO05D006336 5.8e-07 58.5 148 33.8
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 7.6e-07 58.2 104 34.6
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 9.9e-07 57.8 157 33.8
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 9.9e-07 57.8 144 31.2
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 1.3e-06 57.4 136 33.8
COL.COLO4_28373 Corchorus olitorius HOM05D010298 ORTHO05D012539 1.7e-06 57.0 110 39.1
Sabra07G0108200 Salix brachista HOM05D010635 ORTHO05D006336 1.7e-06 57.0 144 38.2
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 2.2e-06 56.6 105 35.2
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 2.9e-06 56.2 112 36.6
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 3.8e-06 55.8 96 39.6
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.9e-06 55.5 121 31.4
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 4.9e-06 55.5 124 33.1
Sabra03G0023900 Salix brachista HOM05D010635 ORTHO05D006336 6.4e-06 55.1 169 29.6
Sabra07G0120400 Salix brachista HOM05D010635 ORTHO05D006336 6.4e-06 55.1 138 32.6


User provided reference genes

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