Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 8.7e-75 283.5 137 100.0
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 5.5e-29 131.3 134 53.0
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 1.2e-28 130.2 133 54.9
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 4.1e-24 115.2 133 44.4
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 5.3e-24 114.8 133 46.6
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 3.8e-22 108.6 115 53.9
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 1.1e-21 107.1 98 54.1
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 1.6e-20 103.2 85 58.8
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 1.0e-19 100.5 137 43.1
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 1.0e-19 100.5 135 43.7
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 1.4e-19 100.1 138 46.4
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 2.3e-19 99.4 137 46.7
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 6.8e-19 97.8 133 42.1
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 8.8e-19 97.4 95 53.7
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 2.0e-18 96.3 138 44.2
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 2.0e-18 96.3 134 41.8
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 4.4e-18 95.1 139 42.4
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 9.7e-18 94.0 92 51.1
TAR365G1039 Trochodendron aralioides HOM05D009134 ORTHO05D011284 1.3e-17 93.6 136 42.6
TAR365G0166 Trochodendron aralioides HOM05D009134 ORTHO05D011284 1.7e-17 93.2 136 42.6
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 4.8e-17 91.7 137 43.8
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 1.1e-16 90.5 135 42.2
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 1.1e-16 90.5 132 40.9
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 4.1e-16 88.6 129 41.1
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 8.5e-14 80.9 93 47.3
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 1.5e-13 80.1 90 46.7
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 3.2e-13 79.0 134 37.3
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 5.5e-13 78.2 91 49.5
Lj3g0025332 Lotus japonicus HOM05D000452 ORTHO05D000647 9.4e-13 77.4 138 38.4
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 1.6e-12 76.6 103 46.6
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 2.7e-12 75.9 85 47.1
arahy.Tifrunner.gnm1.ann1.9K6AGR Arachis hypogaea HOM05D009134 ORTHO05D011284 8.8e-11 70.9 145 36.6
Sabra07G0105900 Salix brachista HOM05D000578 ORTHO05D000422 1.3e-09 67.0 84 44.0
Nn7g37605 Nelumbo nucifera HOM05D009134 ORTHO05D011284 8.3e-09 64.3 93 44.1


User provided reference genes

Program Settings