Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 1.0e-106 390.2 210 100.0
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 7.6e-54 214.5 165 67.9
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 6.4e-53 211.5 160 70.6
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 9.3e-52 207.6 170 64.7
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 1.2e-51 207.2 165 66.1
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 2.1e-51 206.5 151 73.5
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 6.6e-50 201.4 164 67.1
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 1.9e-49 199.9 162 63.6
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 5.3e-47 191.8 145 67.6
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 3.4e-46 189.1 158 62.7
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 3.4e-46 189.1 139 69.1
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 4.5e-46 188.7 137 68.6
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 1.2e-43 180.6 164 59.1
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 2.1e-43 179.9 168 60.1
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 2.7e-43 179.5 164 61.0
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 2.7e-43 179.5 164 61.0
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 3.5e-43 179.1 166 63.3
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 4.6e-43 178.7 148 65.5
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 1.3e-42 177.2 143 65.0
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 2.3e-42 176.4 159 61.0
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 3.0e-42 176.0 139 64.0
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 8.7e-42 174.5 173 60.7
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 1.9e-41 173.3 138 64.5
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 2.5e-41 172.9 138 63.0
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 2.5e-41 172.9 143 64.3
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 4.3e-41 172.2 138 63.0
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 9.6e-41 171.0 140 65.7
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 4.8e-40 168.7 163 62.0
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 6.2e-40 168.3 138 61.6
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 8.1e-40 167.9 142 64.8
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 1.4e-39 167.2 136 66.9
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 6.9e-39 164.9 153 58.8
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 1.5e-38 163.7 166 58.4
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 1.5e-38 163.7 139 61.9
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 2.0e-38 163.3 190 55.3
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.7e-37 160.2 151 58.3
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 1.4e-36 157.1 163 59.5
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 1.9e-36 156.8 166 56.0
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 4.2e-36 155.6 151 56.3
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 9.3e-36 154.5 140 60.7
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 1.6e-35 153.7 131 61.8
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 3.0e-34 149.4 166 56.6
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 3.0e-34 149.4 166 56.6
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 5.1e-34 148.7 153 58.2
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 6.7e-34 148.3 138 60.9
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 6.7e-34 148.3 164 60.4
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 1.1e-33 147.5 155 55.5
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 1.5e-33 147.1 138 60.1
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 1.9e-33 146.7 141 57.4
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 4.3e-33 145.6 141 58.2
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 4.3e-33 145.6 172 50.6
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 2.1e-32 143.3 113 65.5
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 3.7e-32 142.5 156 55.1
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 3.7e-32 142.5 155 49.0
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 4.8e-32 142.1 141 56.7
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 4.8e-32 142.1 155 54.2
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 6.2e-32 141.7 155 53.5
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 1.4e-31 140.6 141 56.7
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 2.4e-31 139.8 155 54.2
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 2.4e-31 139.8 155 53.5
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 3.1e-31 139.4 144 53.5
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 4.1e-31 139.0 153 51.6
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 6.9e-31 138.3 155 52.3
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 6.9e-31 138.3 155 52.3
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 6.9e-31 138.3 155 52.3
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 1.5e-30 137.1 157 53.5
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 2.6e-30 136.3 155 52.3
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 2.6e-30 136.3 155 52.3
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 5.8e-30 135.2 137 56.9
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 1.7e-29 133.7 171 53.2
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 2.2e-29 133.3 134 56.0
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 2.9e-29 132.9 137 55.5
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 6.5e-29 131.7 172 51.7
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 2.5e-28 129.8 156 50.0
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 3.2e-28 129.4 120 55.8
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 3.2e-28 129.4 122 54.1
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 2.1e-27 126.7 148 50.7
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 4.6e-27 125.6 111 58.6
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 8.7e-26 121.3 134 49.3
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 1.9e-25 120.2 140 50.0
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 1.9e-25 120.2 134 53.0
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 2.5e-25 119.8 129 50.4
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 7.4e-25 118.2 146 55.5
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 9.7e-25 117.9 118 53.4
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 4.8e-24 115.5 111 55.0
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 8.2e-24 114.8 118 52.5
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 1.4e-23 114.0 130 51.5
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 4.1e-23 112.5 121 52.1
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 1.7e-21 107.1 91 63.7
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 1.6e-19 100.5 82 62.2
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 2.5e-17 93.2 103 58.3
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 2.5e-17 93.2 88 54.5
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 7.4e-17 91.7 97 53.6
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 7.4e-17 91.7 97 53.6
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 1.3e-16 90.9 122 44.3
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 3.1e-15 86.3 127 46.5
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 9.1e-15 84.7 104 46.2
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 8.5e-13 78.2 84 51.2
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 1.9e-12 77.0 90 50.0
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 6.1e-11 72.0 88 48.9
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 8.8e-10 68.2 58 58.6
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 1.3e-08 64.3 68 52.9
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 5.3e-07 58.9 83 43.4


User provided reference genes

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