Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 5.6e-248 860.5 447 100.0
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 1.3e-204 716.5 434 84.3
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 1.4e-203 713.0 436 83.5
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 3.2e-203 711.8 447 81.9
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 7.2e-203 710.7 454 81.1
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 1.2e-202 709.9 434 84.1
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 3.6e-202 708.4 432 83.3
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 4.7e-202 708.0 429 83.0
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 3.0e-201 705.3 450 81.3
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 3.0e-201 705.3 448 81.9
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 5.1e-201 704.5 431 83.5
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 2.6e-200 702.2 436 82.1
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 3.3e-200 701.8 451 79.6
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 7.4e-200 700.7 426 82.2
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 6.3e-199 697.6 431 82.8
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 8.2e-199 697.2 449 79.7
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 4.1e-198 694.9 432 82.9
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 7.0e-198 694.1 389 88.4
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 1.5e-197 693.0 452 78.1
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 3.4e-197 691.8 395 86.6
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 3.4e-197 691.8 426 82.6
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 5.9e-197 691.0 395 86.8
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 5.9e-197 691.0 425 83.1
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 1.0e-196 690.3 428 81.8
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 1.3e-196 689.9 431 81.2
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 8.5e-196 687.2 449 79.3
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.1e-195 686.8 378 89.9
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 1.1e-195 686.8 428 81.8
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 1.9e-195 686.0 391 87.5
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 1.9e-195 686.0 388 87.1
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 2.5e-195 685.6 423 81.1
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 7.2e-195 684.1 425 81.6
FAN28G0876 Fragaria x ananassa HOM05D005052 ORTHO05D006226 3.6e-194 681.8 393 84.7
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 4.7e-194 681.4 388 86.9
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 1.8e-193 679.5 388 86.9
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 1.8e-193 679.5 431 79.8
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 2.3e-193 679.1 430 79.3
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 2.3e-193 679.1 386 87.3
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 3.0e-193 678.7 390 87.2
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 3.0e-193 678.7 390 87.2
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 3.0e-193 678.7 384 86.5
FvH4_1g11430 Fragaria vesca HOM05D005052 ORTHO05D006226 5.2e-193 677.9 393 84.2
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 6.7e-193 677.6 390 86.2
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 1.1e-192 676.8 406 84.0
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 1.5e-192 676.4 451 77.8
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 2.6e-192 675.6 414 82.4
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 2.6e-192 675.6 432 80.1
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 3.3e-192 675.2 406 83.3
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 3.3e-192 675.2 391 86.2
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 3.3e-192 675.2 455 76.5
FAN19G0738 Fragaria x ananassa HOM05D005052 ORTHO05D006226 4.4e-192 674.9 393 84.5
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 9.7e-192 673.7 425 79.5
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 9.7e-192 673.7 395 83.8
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 1.3e-191 673.3 388 86.1
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 1.3e-191 673.3 388 85.6
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 1.3e-191 673.3 417 81.3
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 2.2e-191 672.5 420 81.0
Sopen02g028370 Solanum pennellii HOM05D005052 ORTHO05D006226 2.2e-191 672.5 420 80.7
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 3.7e-191 671.8 456 77.2
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 8.2e-191 670.6 451 77.2
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 8.2e-191 670.6 443 77.9
FAN23G2381 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.1e-190 670.2 393 84.2
FAN26G3360 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.4e-190 669.8 406 81.8
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 1.8e-190 669.5 409 81.4
PGSC0003DMG400003582 Solanum tuberosum HOM05D005052 ORTHO05D006226 1.8e-190 669.5 399 83.7
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 2.4e-190 669.1 387 85.3
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 4.1e-190 668.3 391 84.4
Peaxi162Scf00328g00523 Petunia axillaris HOM05D005052 ORTHO05D006226 5.3e-190 667.9 384 85.4
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 3.5e-189 665.2 431 78.0
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 3.5e-189 665.2 493 70.4
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 5.9e-189 664.5 403 81.9
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 7.7e-189 664.1 418 80.4
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 7.7e-189 664.1 384 85.9
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 1.0e-188 663.7 394 83.8
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 3.8e-188 661.8 430 78.4
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 6.5e-188 661.0 428 79.4
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 6.5e-188 661.0 453 76.4
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 6.5e-188 661.0 390 84.1
AL8G45470 Arabidopsis lyrata HOM05D005052 ORTHO05D006226 1.1e-187 660.2 391 83.1
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.5e-187 659.8 378 87.0
AT5G66120 Arabidopsis thaliana HOM05D005052 ORTHO05D006226 1.9e-187 659.4 389 83.5
MBI05_g23388_MAGBIO Magnolia biondii HOM05D005052 ORTHO05D006226 1.9e-187 659.4 453 74.8
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 1.9e-187 659.4 385 85.2
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 5.5e-187 657.9 385 84.4
Sp2g30570 Schrenkiella parvula HOM05D005052 ORTHO05D006226 2.1e-186 656.0 389 83.3
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 2.7e-186 655.6 403 81.9
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 3.6e-186 655.2 404 81.2
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 4.7e-186 654.8 383 84.3
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 6.1e-186 654.4 381 84.0
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 8.0e-186 654.1 389 83.0
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 1.8e-185 652.9 404 80.7
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 3.0e-185 652.1 404 80.7
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 3.0e-185 652.1 404 80.7
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 3.0e-185 652.1 404 80.7
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 4.0e-185 651.7 404 80.4
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 1.2e-184 650.2 381 83.5
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 2.6e-184 649.0 374 86.6
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 2.2e-183 646.0 391 82.9
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 1.8e-182 642.9 452 74.3
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 7.0e-182 641.0 366 84.7
HPP92_025914 Vanilla planifolia HOM05D005052 ORTHO05D006226 2.2e-180 636.0 389 79.2
HPP92_025909 Vanilla planifolia HOM05D005052 ORTHO05D006226 3.8e-180 635.2 388 79.4
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 3.5e-173 612.1 386 75.6
CSS0012363 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 3.6e-170 602.1 328 90.9
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 2.6e-168 595.9 364 78.0
Mapoly0031s0094 Marchantia polymorpha HOM05D005052 ORTHO05D006226 3.7e-167 592.0 389 72.5
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 1.6e-165 586.6 385 73.2
Zm00001eb331970 Zea mays HOM05D005052 ORTHO05D006226 3.8e-164 582.0 378 78.8
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.6e-162 576.6 384 77.9
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 1.6e-157 560.1 393 71.2
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 4.0e-153 545.4 372 73.4
Lsat_1_v5_gn_3_125660 Lactuca sativa HOM05D005052 ORTHO05D006226 1.7e-151 540.0 375 75.5
Actinidia17421 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.2e-149 533.9 287 91.6
Cre08.g368950 Chlamydomonas reinhardtii HOM05D005052 ORTHO05D006226 5.6e-147 525.0 388 67.0
EL10Ac6g15523 Beta vulgaris HOM05D005052 ORTHO05D006226 9.5e-147 524.2 475 61.3
CDE04G1415 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 6.2e-146 521.5 287 88.2
Manes.02G107200 Manihot esculenta HOM05D005052 ORTHO05D006226 9.9e-144 514.2 316 83.5
MCO01G625 Micromonas commoda HOM05D005052 ORTHO05D006226 2.5e-139 499.6 389 62.2
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 4.2e-134 482.3 376 68.4
Ah.03g149130 Amaranthus hybridus HOM05D005052 ORTHO05D006226 7.8e-133 478.0 279 86.0
PRCOL_00000314 Prasinoderma coloniale HOM05D005052 ORTHO05D006226 1.6e-130 470.3 363 63.4
SEGI_14262 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.8e-121 440.3 286 75.9
Dinv33661 Davidia involucrata HOM05D005052 ORTHO05D006226 3.5e-117 426.0 233 90.1
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 4.3e-115 419.1 450 55.3
CDE02G2775 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 8.1e-114 414.8 314 67.8
SEGI_08539 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 3.3e-99 366.3 224 78.6
CDE02G1558 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 9.7e-91 338.2 256 70.3
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 9.4e-78 295.0 248 60.1
TPR.G6592 Trifolium pratense HOM05D005052 ORTHO05D006226 2.7e-77 293.5 273 60.4
Lsat_1_v5_gn_0_46241 Lactuca sativa HOM05D005052 ORTHO05D006226 4.7e-77 292.7 318 45.9
RcHm_v2.0_Chr2g0099011 Rosa chinensis HOM05D005052 ORTHO05D006226 1.7e-74 284.3 246 61.8
Haze_27270 Corylus avellana HOM05D005052 ORTHO05D006226 1.5e-70 271.2 355 44.8
unitig_699.g19702 Utricularia gibba HOM05D005052 ORTHO05D006226 7.2e-70 268.9 161 82.0
Dinv33662 Davidia involucrata HOM05D005052 ORTHO05D006226 8.0e-61 238.8 183 69.4
Cfa024476 Carpinus fangiana HOM05D003566 ORTHO05D126353 5.7e-51 206.1 336 40.5
unitig_699.g19703 Utricularia gibba HOM05D005052 ORTHO05D006226 1.3e-50 204.9 175 64.0
Rhsim07G0143100 Rhododendron simsii HOM05D005052 ORTHO05D006226 9.5e-46 188.7 184 59.2
SEGI_40904 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 6.8e-44 182.6 113 75.2
SEGI_17140 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.5e-27 128.3 83 71.1
SEGI_34573 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.5e-27 128.3 83 71.1
Ah.03g149140 Amaranthus hybridus HOM05D000441 ORTHO05D000340 2.6e-27 127.5 77 77.9
MD02G1126200 Malus domestica HOM05D005052 ORTHO05D006226 7.6e-27 125.9 129 57.4
MD14G1099300 Malus domestica HOM05D005052 ORTHO05D006226 7.6e-27 125.9 129 57.4
Rhsim07G0135500 Rhododendron simsii HOM05D005052 ORTHO05D006226 7.3e-22 109.4 73 72.6
DCAR_004721 Daucus carota HOM05D005052 ORTHO05D006226 4.7e-21 106.7 113 51.3
CDE04G1456 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 4.0e-20 103.6 94 55.3
SEGI_22853 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.2e-19 102.1 69 68.1
Rhsim07G0135600 Rhododendron simsii HOM05D005052 ORTHO05D339393 7.1e-09 66.2 56 60.7
CSS0040013 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 1.7e-07 61.6 94 41.5


User provided reference genes

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