Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 6.9e-41 170.2 88 100.0
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 1.0e-36 156.4 88 89.8
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 5.1e-36 154.1 88 89.8
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 5.1e-36 154.1 85 91.8
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.1e-35 152.9 88 87.5
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 5.6e-35 150.6 88 85.2
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 9.6e-35 149.8 88 85.2
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 1.6e-34 149.1 88 87.5
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 1.6e-34 149.1 88 87.5
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 2.8e-34 148.3 88 86.4
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 4.8e-34 147.5 88 86.4
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 4.8e-34 147.5 87 86.2
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 1.1e-33 146.4 85 84.7
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 1.4e-33 146.0 88 84.1
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 1.8e-33 145.6 85 84.7
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 1.8e-33 145.6 85 84.7
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 2.4e-33 145.2 88 83.0
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 2.4e-33 145.2 88 81.8
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 2.4e-33 145.2 85 83.5
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 3.1e-33 144.8 88 84.1
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 5.3e-33 144.1 81 90.1
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 5.3e-33 144.1 87 83.9
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 6.9e-33 143.7 80 91.2
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 6.9e-33 143.7 88 83.0
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 9.0e-33 143.3 88 85.2
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 9.0e-33 143.3 88 81.8
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 3.4e-32 141.4 80 90.0
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 3.4e-32 141.4 80 90.0
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 4.5e-32 141.0 79 88.6
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 5.8e-32 140.6 89 82.0
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 5.8e-32 140.6 84 82.1
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 9.9e-32 139.8 85 84.7
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 9.9e-32 139.8 83 84.3
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 1.3e-31 139.4 83 84.3
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 1.3e-31 139.4 88 77.3
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.7e-31 139.0 87 79.3
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 1.7e-31 139.0 88 77.3
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 2.2e-31 138.7 89 79.8
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 2.2e-31 138.7 89 79.8
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 2.2e-31 138.7 83 83.1
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 2.2e-31 138.7 88 76.1
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 2.9e-31 138.3 89 80.9
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 2.9e-31 138.3 84 83.3
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 2.9e-31 138.3 84 83.3
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 3.8e-31 137.9 89 79.8
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 3.8e-31 137.9 85 81.2
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 4.9e-31 137.5 91 80.2
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 6.4e-31 137.1 89 79.8
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 6.4e-31 137.1 89 78.7
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 6.4e-31 137.1 88 79.5
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 6.4e-31 137.1 88 79.5
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 6.4e-31 137.1 88 79.5
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 6.4e-31 137.1 89 78.7
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 6.4e-31 137.1 88 75.0
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 6.4e-31 137.1 86 77.9
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 6.4e-31 137.1 89 78.7
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 6.4e-31 137.1 85 82.4
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 6.4e-31 137.1 85 82.4
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 8.4e-31 136.7 89 78.7
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 8.4e-31 136.7 85 82.4
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 1.1e-30 136.3 88 76.1
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 1.9e-30 135.6 80 83.8
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 3.2e-30 134.8 89 78.7
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 7.1e-30 133.7 85 81.2
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 4.6e-29 131.0 88 76.1
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 6.0e-29 130.6 88 73.9
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 8.7e-28 126.7 85 78.8
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 8.7e-28 126.7 86 75.6
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 1.5e-27 125.9 82 78.0
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 5.6e-27 124.0 73 83.6
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 9.6e-27 123.2 75 80.0
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 1.3e-26 122.9 88 69.3
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 2.1e-26 122.1 69 87.0
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 3.7e-26 121.3 87 69.0
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 1.4e-25 119.4 88 68.2
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 1.4e-25 119.4 89 70.8
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 4.0e-25 117.9 89 69.7
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 4.0e-25 117.9 81 72.8
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 5.3e-25 117.5 89 69.7
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 2.6e-24 115.2 69 82.6
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 3.4e-24 114.8 72 77.8
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 2.2e-23 112.1 72 77.8
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 4.9e-23 110.9 83 71.1
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.9e-22 109.0 66 83.3
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 2.5e-22 108.6 81 66.7
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 4.2e-22 107.8 66 83.3
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 4.2e-22 107.8 81 70.4
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 7.1e-22 107.1 63 84.1
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 1.2e-21 106.3 81 71.6
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 2.1e-21 105.5 60 83.3
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 2.7e-21 105.1 74 78.4
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 7.9e-21 103.6 76 75.0
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 1.0e-20 103.2 82 69.5
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 3.0e-20 101.7 60 83.3
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 3.9e-20 101.3 55 90.9
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 5.7e-19 97.4 80 63.8
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 2.2e-18 95.5 74 66.2
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 3.7e-18 94.7 82 65.9
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 4.1e-17 91.3 82 58.5
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 4.5e-16 87.8 63 74.6
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 5.5e-14 80.9 85 51.8
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 2.1e-13 79.0 54 68.5
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 3.6e-13 78.2 52 73.1
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 3.0e-12 75.1 88 56.8
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 2.0e-11 72.4 78 51.3
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 1.3e-10 69.7 74 48.6
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 6.3e-10 67.4 55 65.5
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 5.9e-08 60.8 61 45.9
TAR369G0162 Trochodendron aralioides HOM05D002795 ORTHO05D000638 2.2e-07 58.9 38 73.7
Hma1.2p1_0735F.1_g210440 Hydrangea macrophylla HOM05D003704 ORTHO05D005892 5.5e-06 54.3 32 87.5


User provided reference genes

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