Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.624 Acer truncatum HOM05D003805 ORTHO05D004300 7.2e-69 263.8 138 100.0
Cpa.g.sc6.148 Carica papaya HOM05D003805 ORTHO05D004300 7.5e-18 94.4 99 55.6
Thecc.01G031800 Theobroma cacao HOM05D003805 ORTHO05D004300 3.6e-12 75.5 98 49.0
Dinv40009 Davidia involucrata HOM05D002962 ORTHO05D004300 8.1e-12 74.3 93 50.5
Potri.007G022300 Populus trichocarpa HOM05D003805 ORTHO05D004300 4.0e-11 72.0 93 51.6
Duzib264G0487 Durio zibethinus HOM05D003805 ORTHO05D004300 8.9e-11 70.9 96 51.0
Gorai.007G201700 Gossypium raimondii HOM05D003805 ORTHO05D004300 1.2e-10 70.5 94 47.9
DCAR_016030 Daucus carota HOM05D003805 ORTHO05D004300 2.6e-10 69.3 92 45.7
Sabra07G0019500 Salix brachista HOM05D003805 ORTHO05D004300 2.6e-10 69.3 93 50.5
QL06p047086 Quercus lobata HOM05D003805 ORTHO05D004300 7.5e-10 67.8 90 51.1
PGSC0003DMG400003519 Solanum tuberosum HOM05D003805 ORTHO05D004300 9.8e-10 67.4 98 43.9
TWI09G1369 Tripterygium wilfordii HOM05D003805 ORTHO05D004300 1.3e-09 67.0 100 46.0
Nitab4.5_0012261g0010 Nicotiana tabacum HOM05D003805 ORTHO05D004300 2.2e-09 66.2 97 40.2
Hma1.2p1_1297F.1_g274110 Hydrangea macrophylla HOM05D003805 ORTHO05D004300 2.9e-09 65.9 99 44.4
Gohir.D11G189500 Gossypium hirsutum HOM05D003805 ORTHO05D004300 3.7e-09 65.5 91 46.2
Actinidia19196 Actinidia chinensis HOM05D002962 ORTHO05D003280 6.4e-09 64.7 87 44.8
Gohir.A11G183100 Gossypium hirsutum HOM05D003805 ORTHO05D004300 6.4e-09 64.7 90 46.7
SGA_v2.0_scaffold12G06299 Striga asiatica HOM05D003805 ORTHO05D004300 6.4e-09 64.7 89 46.1
Gohir.D12G063500 Gossypium hirsutum HOM05D003805 ORTHO05D004300 1.1e-08 63.9 98 48.0
Gorai.008G066800 Gossypium raimondii HOM05D003805 ORTHO05D004300 1.1e-08 63.9 98 48.0
CsaV3_6G046430 Cucumis sativus L. HOM05D003805 ORTHO05D004300 1.9e-08 63.2 90 47.8
Gohir.A12G063700 Gossypium hirsutum HOM05D003805 ORTHO05D004300 3.2e-08 62.4 98 46.9
Sed0017680 Sechium edule HOM05D003805 ORTHO05D004300 3.2e-08 62.4 89 42.7
GSVIVG01018926001 Vitis vinifera HOM05D003805 ORTHO05D004300 3.2e-08 62.4 90 46.7
MELO3C007840.2 Cucumis melo HOM05D003805 ORTHO05D004300 4.1e-08 62.0 93 45.2
CSS0002171 Camellia sinensis var. sinensis HOM05D003805 ORTHO05D004300 7.1e-08 61.2 92 46.7
Sed0008243 Sechium edule HOM05D003805 ORTHO05D004300 2.1e-07 59.7 89 46.1
THA.LOC104807465 Tarenaya hassleriana HOM05D003805 ORTHO05D004300 2.7e-07 59.3 91 42.9
Nitab4.5_0007490g0050 Nicotiana tabacum HOM05D003805 ORTHO05D004300 3.5e-07 58.9 100 40.0
Nitab4.5_0000178g0350 Nicotiana tabacum HOM05D003805 ORTHO05D004300 4.6e-07 58.5 94 41.5
Peaxi162Scf00366g00711 Petunia axillaris HOM05D003805 ORTHO05D004300 1.0e-06 57.4 111 35.1
CAN.G358.54 Capsicum annuum HOM05D003805 ORTHO05D004300 1.7e-06 56.6 92 43.5
COL.COLO4_22043 Corchorus olitorius HOM05D003805 ORTHO05D004300 1.7e-06 56.6 96 41.7
Sopen02g029690 Solanum pennellii HOM05D003805 ORTHO05D004300 5.1e-06 55.1 98 39.8


User provided reference genes

Program Settings