Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 4.9e-67 258.1 172 100.0
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 1.8e-40 169.9 172 73.8
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 3.9e-40 168.7 172 75.0
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.9e-39 166.4 172 74.4
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 2.5e-39 166.0 172 73.8
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 4.3e-39 165.2 166 77.1
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 7.4e-39 164.5 174 74.7
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 1.6e-38 163.3 172 72.7
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 4.8e-38 161.8 173 74.6
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 8.2e-38 161.0 169 74.0
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 5.3e-37 158.3 166 72.9
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 9.0e-37 157.5 168 75.6
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 3.4e-36 155.6 168 73.2
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 4.5e-36 155.2 175 72.0
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 1.0e-35 154.1 172 69.8
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 1.3e-35 153.7 170 71.2
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 2.2e-35 152.9 173 70.5
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 2.2e-35 152.9 174 72.4
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 2.9e-35 152.5 168 70.8
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 2.9e-35 152.5 168 70.8
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 3.8e-35 152.1 181 70.2
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 3.8e-35 152.1 175 70.9
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 4.9e-35 151.8 172 68.6
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 4.9e-35 151.8 167 73.7
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 8.4e-35 151.0 176 71.6
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.9e-34 149.8 168 69.6
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 2.5e-34 149.4 168 70.2
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 2.5e-34 149.4 168 71.4
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 2.5e-34 149.4 172 70.9
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 3.2e-34 149.1 159 73.6
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 5.5e-34 148.3 174 73.0
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 7.1e-34 147.9 163 72.4
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 1.2e-33 147.1 166 70.5
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.6e-33 146.7 171 69.0
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 2.1e-33 146.4 172 69.8
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 2.1e-33 146.4 166 71.1
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 4.6e-33 145.2 167 71.9
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 4.6e-33 145.2 172 69.2
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 4.6e-33 145.2 135 82.2
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 6.0e-33 144.8 166 72.3
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 7.9e-33 144.4 166 71.1
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 1.0e-32 144.1 175 68.0
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 1.0e-32 144.1 175 68.0
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.3e-32 143.7 167 71.3
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 1.8e-32 143.3 148 74.3
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 1.8e-32 143.3 176 67.6
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 3.9e-32 142.1 114 93.9
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 3.9e-32 142.1 114 93.9
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 5.1e-32 141.7 173 69.9
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 6.7e-32 141.4 167 68.9
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 8.7e-32 141.0 137 78.1
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 8.7e-32 141.0 130 86.2
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.5e-31 140.2 166 69.9
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 1.9e-31 139.8 173 66.5
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 3.3e-31 139.0 168 71.4
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 5.7e-31 138.3 136 77.9
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 7.4e-31 137.9 166 68.7
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.2e-30 136.3 134 80.6
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 2.8e-30 136.0 167 68.9
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 3.7e-30 135.6 167 68.3
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 3.7e-30 135.6 168 67.9
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 4.8e-30 135.2 166 68.1
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 4.8e-30 135.2 166 68.1
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 4.8e-30 135.2 167 69.5
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 6.3e-30 134.8 166 66.3
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 8.2e-30 134.4 167 68.3
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.8e-29 133.3 167 69.5
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 2.4e-29 132.9 168 66.1
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 4.1e-29 132.1 167 68.3
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 6.9e-29 131.3 169 67.5
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 6.9e-29 131.3 160 69.4
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 6.9e-29 131.3 130 69.2
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.0e-28 129.8 130 82.3
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 3.4e-28 129.0 107 65.4
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 5.9e-28 128.3 167 67.1
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 7.6e-28 127.9 130 63.1
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 1.0e-27 127.5 172 65.7
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 2.2e-27 126.3 132 76.5
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 8.5e-27 124.4 162 69.8
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 4.2e-26 122.1 166 65.7
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 7.2e-26 121.3 128 74.2
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.2e-25 120.6 165 56.4
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 2.7e-25 119.4 126 79.4
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 4.6e-25 118.6 108 63.0
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 7.9e-25 117.9 122 81.1
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.3e-24 117.1 116 81.9
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 2.8e-22 109.4 131 70.2
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 2.8e-22 109.4 135 68.9
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 5.3e-21 105.1 113 75.2
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 1.2e-20 104.0 126 46.8
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 3.4e-20 102.4 111 77.5
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 1.3e-19 100.5 102 58.8
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 1.1e-18 97.4 123 70.7
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.2e-17 94.0 123 70.7
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 8.8e-16 87.8 125 68.0
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.1e-15 87.4 131 45.8
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 1.3e-14 84.0 89 73.0
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 1.4e-13 80.5 121 64.5
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 5.0e-11 72.0 100 40.0
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 8.5e-11 71.2 123 63.4
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 1.2e-09 67.4 67 50.7
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 2.1e-09 66.6 67 50.7
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 1.7e-06 57.0 32 87.5


User provided reference genes

Program Settings