Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.473 Acer truncatum HOM05D007587 ORTHO05D009657 1.9e-34 148.7 78 100.0
Dinv39924 Davidia involucrata HOM05D007587 ORTHO05D009657 6.3e-22 107.1 57 77.2
Prupe.7G145500 Prunus persica HOM05D007587 ORTHO05D009657 1.2e-20 102.8 55 72.7
TAR381G1104 Trochodendron aralioides HOM05D007587 ORTHO05D009657 1.2e-20 102.8 58 70.7
Potri.007G034000 Populus trichocarpa HOM05D007587 ORTHO05D009657 1.6e-20 102.4 56 71.4
Gohir.A11G188150 Gossypium hirsutum HOM05D007587 ORTHO05D009657 4.5e-20 100.9 52 75.0
Gohir.D11G194650 Gossypium hirsutum HOM05D007587 ORTHO05D009657 4.5e-20 100.9 52 75.0
Gorai.007G208100 Gossypium raimondii HOM05D007587 ORTHO05D009657 4.5e-20 100.9 52 75.0
Potri.005G130750 Populus trichocarpa HOM05D007587 ORTHO05D009657 7.7e-20 100.1 57 64.9
Ciclev10027038m.g Citrus clementina HOM05D007587 ORTHO05D009657 1.3e-19 99.4 60 68.3
Cpa.g.sc15.59 Carica papaya HOM05D007587 ORTHO05D009657 3.8e-19 97.8 55 70.9
Lj7C15T6 Lonicera japonica HOM05D007587 ORTHO05D009657 5.0e-19 97.4 57 66.7
Thecc.01G045600 Theobroma cacao HOM05D007587 ORTHO05D009657 5.0e-19 97.4 58 67.2
QL06p044263 Quercus lobata HOM05D007587 ORTHO05D009657 1.1e-18 96.3 57 66.7
FAN23G2556 Fragaria x ananassa HOM05D007587 ORTHO05D009657 1.9e-18 95.5 52 67.3
Glyma.11G061100 Glycine max HOM05D007587 ORTHO05D009657 1.9e-18 95.5 57 66.7
Manes.13G132300 Manihot esculenta HOM05D007587 ORTHO05D009657 2.5e-18 95.1 55 63.6
Nitab4.5_0005594g0030 Nicotiana tabacum HOM05D007587 ORTHO05D009657 2.5e-18 95.1 55 65.5
Manes.12G097400 Manihot esculenta HOM05D007587 ORTHO05D009657 3.3e-18 94.7 52 67.3
Psat2g163680 Pisum sativum HOM05D007587 ORTHO05D009657 3.3e-18 94.7 59 64.4
Migut.H00502 Erythranthe guttata HOM05D007587 ORTHO05D009657 5.5e-18 94.0 45 75.6
FAN26G0670 Fragaria x ananassa HOM05D007587 ORTHO05D009657 5.5e-18 94.0 52 65.4
FAN28G1310 Fragaria x ananassa HOM05D007587 ORTHO05D009657 7.2e-18 93.6 52 65.4
CSS0038445 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 9.5e-18 93.2 45 75.6
COL.COLO4_22178 Corchorus olitorius HOM05D007587 ORTHO05D009657 9.5e-18 93.2 45 75.6
Solyc02g090080.1 Solanum lycopersicum HOM05D007587 ORTHO05D009657 9.5e-18 93.2 55 61.8
SalBow1G8004 Salvia bowleyana HOM05D007587 ORTHO05D009657 1.2e-17 92.8 45 75.6
ECA238G1538 Erigeron canadensis HOM05D003002 ORTHO05D002276 2.1e-17 92.0 52 63.5
TPR.G29850 Trifolium pratense HOM05D007587 ORTHO05D009657 2.1e-17 92.0 47 72.3
Medtr5g018610 Medicago truncatula HOM05D007587 ORTHO05D009657 2.8e-17 91.7 59 62.7
Cc07_g05380 Coffea canephora HOM05D007587 ORTHO05D009657 4.7e-17 90.9 51 62.7
Psat0s261g0120 Pisum sativum HOM05D007587 ORTHO05D009657 6.1e-17 90.5 51 64.7
Glyma.16G143900 Glycine max HOM05D007587 ORTHO05D009657 1.0e-16 89.7 45 75.6
Phvul.002G023800 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 1.4e-16 89.4 59 62.7
Zm00001eb135300 Zea mays HOM05D007587 ORTHO05D009657 2.3e-16 88.6 44 75.0
Lsat_1_v5_gn_2_87241 Lactuca sativa HOM05D007587 ORTHO05D009657 6.8e-16 87.0 45 71.1
Phvul.003G249500 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 6.8e-16 87.0 57 63.2
Glyma.02G061500 Glycine max HOM05D007587 ORTHO05D009657 1.2e-15 86.3 45 73.3
Os12g0596101 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 1.2e-15 86.3 52 59.6
Lsat_1_v5_gn_3_93981 Lactuca sativa HOM05D007587 ORTHO05D009657 2.0e-15 85.5 45 71.1
Glyma.19G074100 Glycine max HOM05D007587 ORTHO05D009657 2.6e-15 85.1 45 71.1
Atru.chr13.897 Acer truncatum HOM05D007587 ORTHO05D009657 7.5e-15 83.6 56 57.1
Lj2g0021293 Lotus japonicus HOM05D007587 ORTHO05D009657 1.7e-14 82.4 45 66.7
QL02p001961 Quercus lobata HOM05D007587 ORTHO05D009657 2.2e-14 82.0 59 59.3
ClCG02G013040 Citrullus lanatus HOM05D007587 ORTHO05D009657 3.7e-14 81.3 58 55.2
CDE06G1347 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 6.3e-14 80.5 57 54.4
AagrBONN_evm.TU.Sc2ySwM_117.169 Anthoceros agrestis HOM05D007587 ORTHO05D009657 1.1e-13 79.7 52 57.7
arahy.Tifrunner.gnm1.ann1.986LRW Arachis hypogaea HOM05D007587 ORTHO05D009657 1.1e-13 79.7 45 64.4
arahy.Tifrunner.gnm1.ann1.JQT6QK Arachis hypogaea HOM05D007587 ORTHO05D009657 1.1e-13 79.7 45 64.4
TAR381G0827 Trochodendron aralioides HOM05D007587 ORTHO05D009657 2.4e-13 78.6 57 54.4
MBI16_g05021_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 3.2e-13 78.2 61 52.5
GSVIVG01034787001 Vitis vinifera HOM05D007587 ORTHO05D009657 3.2e-13 78.2 52 51.9
CDE04G0885 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 4.1e-13 77.8 47 57.4
Potri.005G150300 Populus trichocarpa HOM05D007587 ORTHO05D009657 4.1e-13 77.8 43 65.1
CAN.G416.39 Capsicum annuum HOM05D007587 ORTHO05D009657 5.4e-13 77.4 52 55.8
MBI16_g05020_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 5.4e-13 77.4 61 52.5
Nn5g27360 Nelumbo nucifera HOM05D007587 ORTHO05D009657 7.0e-13 77.0 57 54.4
Nitab4.5_0015343g0010 Nicotiana tabacum HOM05D007587 ORTHO05D009657 7.0e-13 77.0 43 65.1
Os03g0673700 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 7.0e-13 77.0 52 55.8
Actinidia29637 Actinidia chinensis HOM05D007587 ORTHO05D009657 9.2e-13 76.6 51 54.9
vmacro04608 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 9.2e-13 76.6 52 55.8
Zm00001eb052110 Zea mays HOM05D007587 ORTHO05D009657 9.2e-13 76.6 72 45.8
CSS0045179 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 1.6e-12 75.9 43 62.8
Nn5g27361 Nelumbo nucifera HOM05D007587 ORTHO05D009657 2.0e-12 75.5 43 62.8
PGSC0003DMG400004952 Solanum tuberosum HOM05D007587 ORTHO05D009657 2.0e-12 75.5 52 53.8
CiPaw.15G043500 Carya illinoinensis HOM05D007587 ORTHO05D009657 2.7e-12 75.1 59 52.5
Manes.18G051550 Manihot esculenta HOM05D007587 ORTHO05D009657 2.7e-12 75.1 57 50.9
vmacro04609 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 2.7e-12 75.1 43 65.1
Cc10_g07830 Coffea canephora HOM05D007587 ORTHO05D009657 3.5e-12 74.7 43 65.1
Rhsim07G0216200 Rhododendron simsii HOM05D007587 ORTHO05D009657 4.6e-12 74.3 52 53.8
vmacro04607 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 4.6e-12 74.3 43 62.8
CsaV3_2G017120 Cucumis sativus L. HOM05D007587 ORTHO05D009657 5.9e-12 73.9 57 47.4
Nn5g27362 Nelumbo nucifera HOM05D007587 ORTHO05D009657 7.8e-12 73.6 43 58.1
Rhsim07G0216100 Rhododendron simsii HOM05D007587 ORTHO05D009657 7.8e-12 73.6 43 62.8
Migut.O00867 Erythranthe guttata HOM05D007587 ORTHO05D009657 1.0e-11 73.2 51 54.9
CiPaw.15G043600 Carya illinoinensis HOM05D007587 ORTHO05D009657 1.3e-11 72.8 43 62.8
COL.COLO4_35374 Corchorus olitorius HOM05D007587 ORTHO05D009657 2.3e-11 72.0 43 60.5
Migut.C00432 Erythranthe guttata HOM05D007587 ORTHO05D009657 2.3e-11 72.0 51 52.9
Hma1.2p1_2651F.1_g326150 Hydrangea macrophylla HOM05D007587 ORTHO05D009657 2.3e-11 72.0 43 58.1
SalBow7G1850 Salvia bowleyana HOM05D007587 ORTHO05D009657 2.9e-11 71.6 43 58.1
Sed0017528 Sechium edule HOM05D007587 ORTHO05D009657 2.9e-11 71.6 50 52.0
Cfa017911 Carpinus fangiana HOM05D007587 ORTHO05D009657 5.0e-11 70.9 43 58.1
Thecc.08G082100 Theobroma cacao HOM05D007587 ORTHO05D009657 5.0e-11 70.9 57 50.9
Os03g0673400 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 6.6e-11 70.5 43 58.1
Nn4g24320 Nelumbo nucifera HOM05D007587 ORTHO05D009657 1.1e-10 69.7 43 60.5
Gohir.A01G124700 Gossypium hirsutum HOM05D007587 ORTHO05D009657 7.3e-10 67.0 43 55.8
Gohir.D01G112300 Gossypium hirsutum HOM05D007587 ORTHO05D009657 7.3e-10 67.0 43 55.8
Gorai.002G137200 Gossypium raimondii HOM05D007587 ORTHO05D009657 7.3e-10 67.0 43 55.8
Pp3c20_19960 Physcomitrium patens HOM05D007587 ORTHO05D009657 1.2e-09 66.2 45 60.0
Mapoly0026s0006 Marchantia polymorpha HOM05D007587 ORTHO05D009657 2.1e-09 65.5 43 55.8
CBR_g28808 Chara braunii HOM05D007587 ORTHO05D009657 2.8e-09 65.1 46 50.0
CiPaw.01G029300 Carya illinoinensis HOM05D007587 ORTHO05D009657 1.5e-07 59.3 37 64.9
Pp3c19_1061 Physcomitrium patens HOM05D007587 ORTHO05D009657 2.0e-07 58.9 45 53.3
Pp3c24_89 Physcomitrium patens HOM05D007587 ORTHO05D009657 2.0e-07 58.9 45 51.1
Pp3c19_1062 Physcomitrium patens HOM05D007587 ORTHO05D009657 5.8e-07 57.4 44 52.3


User provided reference genes

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