Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.472 Acer truncatum HOM05D004401 ORTHO05D005169 1.2e-243 846.3 480 100.0
COL.COLO4_22179 Corchorus olitorius HOM05D004401 ORTHO05D005169 1.5e-153 547.0 479 66.2
Ciclev10025507m.g Citrus clementina HOM05D004401 ORTHO05D005169 1.3e-149 533.9 479 69.3
CSS0030032 Camellia sinensis var. sinensis HOM05D004401 ORTHO05D005169 1.6e-147 526.9 468 66.2
CSS0031085 Camellia sinensis var. sinensis HOM05D004401 ORTHO05D005169 1.6e-147 526.9 468 66.5
Dinv39923 Davidia involucrata HOM05D004401 ORTHO05D005169 2.1e-147 526.6 463 66.1
QL06p044258 Quercus lobata HOM05D004401 ORTHO05D005169 1.1e-145 520.8 423 70.2
Haze_15165 Corylus avellana HOM05D004401 ORTHO05D005169 4.0e-143 512.3 483 63.6
Manes.13G132200 Manihot esculenta HOM05D004401 ORTHO05D005169 1.2e-142 510.8 491 63.7
RhsimUnG0212100 Rhododendron simsii HOM05D004401 ORTHO05D005169 2.9e-141 506.1 452 65.5
Potri.007G034200 Populus trichocarpa HOM05D004401 ORTHO05D005169 1.9e-140 503.4 459 65.8
Hma1.2p1_0739F.1_g211280 Hydrangea macrophylla HOM05D004401 ORTHO05D005169 9.3e-140 501.1 455 65.5
Cfa004233 Carpinus fangiana HOM05D004401 ORTHO05D005169 1.9e-137 493.4 480 62.5
FvH4_1g14490 Fragaria vesca HOM05D004401 ORTHO05D005169 9.0e-135 484.6 483 61.3
FAN19G2756 Fragaria x ananassa HOM05D004401 ORTHO05D005169 1.2e-134 484.2 483 61.3
RcHm_v2.0_Chr2g0103241 Rosa chinensis HOM05D004401 ORTHO05D005169 1.5e-134 483.8 478 61.7
Gohir.D11G048500 Gossypium hirsutum HOM05D004401 ORTHO05D005169 3.4e-134 482.6 476 62.6
Potri.005G130800 Populus trichocarpa HOM05D004401 ORTHO05D005169 3.4e-134 482.6 476 63.2
Duzib147G0010 Durio zibethinus HOM05D004401 ORTHO05D005169 5.8e-134 481.9 498 60.2
Hma1.2p1_0261F.1_g104910 Hydrangea macrophylla HOM05D004401 ORTHO05D005169 2.9e-133 479.6 470 62.3
Prupe.7G145400 Prunus persica HOM05D004401 ORTHO05D005169 6.4e-133 478.4 470 62.6
Cpa.g.sc15.60 Carica papaya HOM05D004401 ORTHO05D005169 9.3e-132 474.6 479 60.8
Actinidia12088 Actinidia chinensis HOM05D004401 ORTHO05D005169 1.8e-130 470.3 470 59.8
Duzib264G0051 Durio zibethinus HOM05D004401 ORTHO05D005169 8.7e-130 468.0 481 59.9
Sabra07G0029800 Salix brachista HOM05D004401 ORTHO05D005169 3.3e-129 466.1 487 61.0
CiPaw.01G029200 Carya illinoinensis HOM05D004401 ORTHO05D005169 1.6e-128 463.8 485 59.8
Gorai.007G052100 Gossypium raimondii HOM05D004401 ORTHO05D005169 6.2e-128 461.8 476 60.3
MD15G1273200 Malus domestica HOM05D004401 ORTHO05D005169 1.8e-127 460.3 480 60.0
Nitab4.5_0000108g0170 Nicotiana tabacum HOM05D004401 ORTHO05D005169 2.6e-126 456.4 473 60.5
MD02G1158400 Malus domestica HOM05D004401 ORTHO05D005169 4.5e-126 455.7 481 59.5
Gohir.A11G045000 Gossypium hirsutum HOM05D004401 ORTHO05D005169 1.0e-125 454.5 476 59.7
Gohir.A02G161600 Gossypium hirsutum HOM05D004401 ORTHO05D005169 1.3e-125 454.1 479 59.9
Gohir.D03G018900 Gossypium hirsutum HOM05D004401 ORTHO05D005169 3.8e-125 452.6 478 60.0
Gorai.003G019300 Gossypium raimondii HOM05D004401 ORTHO05D005169 6.5e-125 451.8 478 60.0
Migut.K00842 Erythranthe guttata HOM05D004401 ORTHO05D005169 3.2e-124 449.5 437 61.8
Nitab4.5_0005594g0020 Nicotiana tabacum HOM05D004401 ORTHO05D005169 3.2e-124 449.5 473 60.3
PGSC0003DMG400010033 Solanum tuberosum HOM05D004401 ORTHO05D005169 3.2e-124 449.5 465 60.0
CAN.G836.19 Capsicum annuum HOM05D004401 ORTHO05D005169 7.1e-124 448.4 477 58.9
Hund14120 Selenicereus undatus HOM05D004401 ORTHO05D005169 1.2e-123 447.6 472 58.9
Sopen02g034780 Solanum pennellii HOM05D004401 ORTHO05D005169 1.6e-123 447.2 465 59.6
Eucgr.H01940 Eucalyptus grandis HOM05D004401 ORTHO05D005169 3.5e-123 446.0 414 65.2
Ca_24810_v3 Cicer arietinum L. HOM05D004401 ORTHO05D005169 4.6e-123 445.7 426 61.3
MSTRG.15405 Avicennia marina HOM05D004401 ORTHO05D005169 1.3e-122 444.1 474 58.6
THA.LOC104807569 Tarenaya hassleriana HOM05D004401 ORTHO05D005169 1.8e-122 443.7 491 59.5
FAN23G0479 Fragaria x ananassa HOM05D004401 ORTHO05D005169 3.9e-122 442.6 487 58.1
PGR102G2627 Punica granatum HOM05D004401 ORTHO05D005169 6.7e-122 441.8 445 62.0
TWI73G0228 Tripterygium wilfordii HOM05D004401 ORTHO05D005169 6.7e-122 441.8 481 56.1
Solyc02g090090.3 Solanum lycopersicum HOM05D004401 ORTHO05D005169 8.7e-122 441.4 465 59.1
FAN26G1141 Fragaria x ananassa HOM05D004401 ORTHO05D005169 9.6e-121 438.0 487 57.9
Carub.0007s0340 Capsella rubella HOM05D004401 ORTHO05D005169 1.3e-120 437.6 488 57.0
TPR.G29860 Trifolium pratense HOM05D004401 ORTHO05D005169 6.2e-120 435.3 422 61.4
Sed0006552 Sechium edule HOM05D004401 ORTHO05D005169 1.4e-119 434.1 483 56.3
Thhalv10025057m.g Eutrema salsugineum HOM05D004401 ORTHO05D005169 4.1e-119 432.6 484 56.8
FAN28G2641 Fragaria x ananassa HOM05D004401 ORTHO05D005169 1.5e-118 430.6 487 57.1
Peaxi162Scf00535g00620 Petunia axillaris HOM05D004401 ORTHO05D005169 3.4e-118 429.5 481 58.0
Thecc.01G045700 Theobroma cacao HOM05D004401 ORTHO05D005169 7.6e-118 428.3 479 56.6
Cc07_g05390 Coffea canephora HOM05D004401 ORTHO05D005169 1.3e-117 427.6 475 56.0
ECA232G2743 Erigeron canadensis HOM05D004401 ORTHO05D005169 5.0e-117 425.6 452 59.1
Lalb_Chr05g0213081 Lupinus albus HOM05D004401 ORTHO05D005169 1.2e-115 421.0 482 56.0
vmacro05286 Vaccinium macrocarpon HOM05D004401 ORTHO05D005169 3.5e-115 419.5 559 50.3
BolC3t20224H Brassica oleracea HOM05D004401 ORTHO05D005169 7.9e-115 418.3 501 53.5
CARHR245290 Cardamine hirsuta HOM05D004401 ORTHO05D005169 1.0e-114 417.9 504 54.0
EL10Ac6g14845 Beta vulgaris HOM05D004401 ORTHO05D005169 5.1e-114 415.6 438 57.5
ClCG02G013050 Citrullus lanatus HOM05D004401 ORTHO05D005169 5.7e-113 412.1 486 56.4
Glyma.11G061000 Glycine max HOM05D004401 ORTHO05D005169 1.3e-112 411.0 484 54.3
Nn6g32163 Nelumbo nucifera HOM05D004401 ORTHO05D005169 2.2e-112 410.2 417 59.7
TAR625G0432 Trochodendron aralioides HOM05D004401 ORTHO05D005169 2.2e-112 410.2 476 56.3
Lalb_Chr09g0322851 Lupinus albus HOM05D004401 ORTHO05D005169 4.8e-112 409.1 482 55.4
Glyma.01G181200 Glycine max HOM05D004401 ORTHO05D005169 1.8e-111 407.1 484 53.7
SalBow1G3467 Salvia bowleyana HOM05D004401 ORTHO05D005169 6.9e-111 405.2 470 56.4
SalBow1G0657 Salvia bowleyana HOM05D004401 ORTHO05D005169 2.0e-110 403.7 470 56.2
CSS0031753 Camellia sinensis var. sinensis HOM05D004401 ORTHO05D005169 2.6e-110 403.3 353 68.0
arahy.Tifrunner.gnm1.ann1.6IB1GK Arachis hypogaea HOM05D004401 ORTHO05D005169 4.5e-110 402.5 526 52.1
Lj4A136G82 Lonicera japonica HOM05D004401 ORTHO05D005169 7.7e-110 401.7 470 54.0
Gorai.007G208200 Gossypium raimondii HOM05D004401 ORTHO05D005169 2.2e-109 400.2 485 55.7
Medtr5g018600 Medicago truncatula HOM05D004401 ORTHO05D005169 5.0e-109 399.1 469 53.5
AL7G14010 Arabidopsis lyrata HOM05D004401 ORTHO05D005169 1.4e-108 397.5 484 53.9
CsaV3_2G017130 Cucumis sativus L. HOM05D004401 ORTHO05D005169 4.2e-108 396.0 489 53.8
BraA08t34203Z Brassica rapa HOM05D004401 ORTHO05D005169 5.5e-108 395.6 489 53.6
MELO3C020916.2 Cucumis melo HOM05D004401 ORTHO05D005169 3.6e-107 392.9 491 54.2
Oeu020614.1 Olea europaea HOM05D004401 ORTHO05D005169 6.1e-107 392.1 474 54.2
Sc03g0001200 Simmondsia chinensis HOM05D004401 ORTHO05D005169 1.4e-106 391.0 378 61.9
CANSAT01G2530 Cannabis sativa HOM05D004401 ORTHO05D005169 2.0e-105 387.1 481 52.6
PSO700G0114 Papaver somniferum HOM05D004401 ORTHO05D005169 1.7e-104 384.0 417 55.6
arahy.Tifrunner.gnm1.ann1.ZW82SR Arachis hypogaea HOM05D004401 ORTHO05D005169 4.8e-104 382.5 520 50.6
VMungo1215G0638 Vigna mungo HOM05D004401 ORTHO05D005169 8.2e-104 381.7 484 51.2
C03p79770 Brassica napus HOM05D004401 ORTHO05D005169 1.1e-103 381.3 492 51.6
HanXRQChr09g0264391 Helianthus annuus HOM05D004401 ORTHO05D005169 1.4e-103 380.9 454 54.0
PSO170G1133 Papaver somniferum HOM05D004401 ORTHO05D005169 1.8e-103 380.6 417 55.4
MBI16_g31340_MAGBIO Magnolia biondii HOM05D004401 ORTHO05D005169 2.4e-103 380.2 464 53.4
AUR62027242 Chenopodium quinoa HOM05D004401 ORTHO05D005169 1.2e-102 377.9 489 50.3
DCAR_025670 Daucus carota HOM05D004401 ORTHO05D005169 2.0e-102 377.1 484 52.5
AT4G37210 Arabidopsis thaliana HOM05D004401 ORTHO05D005169 5.9e-102 375.6 485 53.4
GSVIVG01003774001 Vitis vinifera HOM05D004401 ORTHO05D005169 7.7e-102 375.2 342 65.2
A08p22480 Brassica napus HOM05D004401 ORTHO05D005169 2.2e-101 373.6 515 49.5
Gohir.D11G194700 Gossypium hirsutum HOM05D004401 ORTHO05D005169 2.2e-101 373.6 475 53.5
Rhsim08G0109400 Rhododendron simsii HOM05D004401 ORTHO05D005169 6.5e-101 372.1 472 53.6
Phvul.002G023700 Phaseolus vulgaris HOM05D004401 ORTHO05D005169 1.4e-100 370.9 397 57.4
Lj2g0012735 Lotus japonicus HOM05D004401 ORTHO05D005169 2.1e-99 367.1 476 51.1
unitig_0.g2308 Utricularia gibba HOM05D004401 ORTHO05D005169 3.6e-99 366.3 480 51.2
Sed0017517 Sechium edule HOM05D004401 ORTHO05D005169 2.2e-96 357.1 436 54.4
Ah.03g142140 Amaranthus hybridus HOM05D004401 ORTHO05D005169 2.4e-95 353.6 551 45.6
Aqoxy5G01748 Aquilegia oxysepala HOM05D004401 ORTHO05D005169 2.6e-94 350.1 433 53.6
AUR62003232 Chenopodium quinoa HOM05D004401 ORTHO05D005169 5.9e-94 349.0 479 49.1
HanXRQChr15g0489601 Helianthus annuus HOM05D004401 ORTHO05D005169 5.9e-94 349.0 453 51.9
Gohir.A11G188200 Gossypium hirsutum HOM05D004401 ORTHO05D005169 1.0e-93 348.2 485 50.9
C01p02190 Brassica napus HOM05D004401 ORTHO05D005169 8.5e-93 345.1 478 49.8
Ah.02g126040 Amaranthus hybridus HOM05D004401 ORTHO05D005169 1.5e-92 344.4 426 51.9
Lsat_1_v5_gn_4_177820 Lactuca sativa HOM05D004401 ORTHO05D005169 3.2e-92 343.2 456 51.8
TAR381G0351 Trochodendron aralioides HOM05D004401 ORTHO05D005169 4.0e-90 336.3 435 51.7
Sabra05G0106000 Salix brachista HOM05D004401 ORTHO05D005169 8.8e-90 335.1 275 70.9
A01p02010 Brassica napus HOM05D004401 ORTHO05D005169 1.6e-86 324.3 404 53.5
Dinv26777 Davidia involucrata HOM05D004401 ORTHO05D005169 2.0e-86 323.9 244 73.8
Sp7g34580 Schrenkiella parvula HOM05D004401 ORTHO05D005169 5.9e-86 322.4 407 51.1
BraA01t00189Z Brassica rapa HOM05D004401 ORTHO05D005169 6.5e-85 318.9 482 48.1
vmacro17880 Vaccinium macrocarpon HOM05D004401 ORTHO05D005169 1.1e-84 318.2 553 43.4
CDE06G0525 Ceratophyllum demersum HOM05D004401 ORTHO05D005169 4.2e-84 316.2 425 50.1
BolC1t00211H Brassica oleracea HOM05D004401 ORTHO05D005169 4.0e-82 309.7 478 46.4
HPP92_019643 Vanilla planifolia HOM05D004401 ORTHO05D005169 9.1e-79 298.5 440 48.0
SHI08724 Sapria himalayana HOM05D004401 ORTHO05D005169 2.2e-77 293.9 478 44.4
Oeu032116.1 Olea europaea HOM05D004401 ORTHO05D005169 2.5e-76 290.4 258 68.2
CDE04G2769 Ceratophyllum demersum HOM05D004401 ORTHO05D005169 5.7e-73 279.3 422 46.7
ATR0733G114 Amborella trichopoda HOM05D004401 ORTHO05D005169 2.3e-66 257.3 458 41.9
SGA_v2.0_scaffold62G21530 Striga asiatica HOM05D004401 ORTHO05D005169 4.0e-66 256.5 277 60.3
Os07g0122400 Oryza sativa ssp. japonica HOM05D004401 ORTHO05D005169 2.2e-64 250.8 407 43.7
Zm00001eb117930 Zea mays HOM05D004401 ORTHO05D005169 5.8e-57 226.1 408 41.4
Aa31LG6G13770 Aethionema arabicum HOM05D004401 ORTHO05D005169 4.9e-56 223.0 288 52.8
AagrBONN_evm.TU.Sc2ySwM_228.4759 Anthoceros agrestis HOM05D004401 ORTHO05D005169 1.0e-45 188.7 428 35.0
Pp3c24_5960 Physcomitrium patens HOM05D004401 ORTHO05D005169 2.2e-40 171.0 445 34.4
Sc07g0000190 Simmondsia chinensis HOM05D004401 ORTHO05D005169 6.4e-40 169.5 268 45.1
Sabra05G0106100 Salix brachista HOM05D004401 ORTHO05D005169 2.1e-35 154.5 190 56.8
Mapoly0080s0039 Marchantia polymorpha HOM05D004401 ORTHO05D005169 1.4e-31 141.7 416 31.2
Gohir.A12G038266 Gossypium hirsutum HOM05D004401 ORTHO05D005169 1.6e-27 128.3 100 67.0
CBR_g26200 Chara braunii HOM05D004401 ORTHO05D005169 4.0e-26 123.6 451 29.5
Oeu023283.1 Olea europaea HOM05D004401 ORTHO05D005169 3.2e-23 114.0 110 56.4
Zm00001eb178920 Zea mays HOM05D004401 ORTHO05D005169 5.4e-23 113.2 195 43.6
Rhsim06G0070300 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.2e-22 112.1 147 53.1
Pp3c8_14970 Physcomitrium patens HOM05D004401 ORTHO05D005169 6.0e-22 109.8 291 32.3
Zm00001eb343330 Zea mays HOM05D004401 ORTHO05D005169 6.6e-21 106.3 189 41.8
GSVIVG01003776001 Vitis vinifera HOM05D004401 ORTHO05D005169 2.5e-20 104.4 67 70.1
Lsat_1_v5_gn_1_2961 Lactuca sativa HOM05D004401 ORTHO05D005169 5.6e-20 103.2 176 37.5
Glyma.06G250700 Glycine max HOM05D004401 ORTHO05D005169 3.6e-19 100.5 80 65.0
BcaNung03516 Brassica carinata HOM05D004401 ORTHO05D005169 1.8e-18 98.2 166 48.2
Sc07g0000180 Simmondsia chinensis HOM05D004401 ORTHO05D005169 5.3e-18 96.7 135 44.4
Zm00001eb130830 Zea mays HOM05D004401 ORTHO05D005169 1.2e-17 95.5 179 40.2
MCO16G464 Micromonas commoda HOM05D004401 ORTHO05D005169 2.0e-17 94.7 408 27.0
Zm00001eb306620 Zea mays HOM05D022290 ORTHO05D005169 3.8e-16 90.5 197 39.1
Zm00001eb250440 Zea mays HOM05D004401 ORTHO05D005169 1.2e-14 85.5 157 40.8
SEGI_23846 Sequoiadendron giganteum HOM05D004401 ORTHO05D005169 8.7e-13 79.3 255 27.8
Zm00001eb268170 Zea mays HOM05D004401 ORTHO05D005169 8.7e-13 79.3 197 36.5
Potri.002G130800 Populus trichocarpa HOM05D028338 ORTHO05D050528 1.5e-12 78.6 342 28.9
AL2G36200 Arabidopsis lyrata HOM05D004401 ORTHO05D005169 4.3e-12 77.0 153 44.4
Zm00001eb182160 Zea mays HOM05D004401 ORTHO05D005169 9.6e-12 75.9 107 43.0
Sabra02G0102900 Salix brachista HOM05D028338 ORTHO05D050528 4.8e-11 73.6 321 28.3
Psat0s4627g0120 Pisum sativum HOM05D004401 ORTHO05D005169 2.4e-10 71.2 262 29.4
SMO358G0116 Selaginella moellendorffii HOM05D004401 ORTHO05D005169 7.6e-09 66.2 72 48.6


User provided reference genes

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