Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.435 Acer truncatum HOM05D000289 ORTHO05D009609 6.2e-55 217.2 112 100.0
Atru.chr3.436 Acer truncatum HOM05D000289 ORTHO05D009609 6.3e-39 164.1 88 94.3
Ciclev10026468m.g Citrus clementina HOM05D000289 ORTHO05D009609 2.5e-27 125.6 118 55.1
CiPaw.01G025400 Carya illinoinensis HOM05D000289 ORTHO05D009609 1.8e-22 109.4 88 56.8
Cfa016388 Carpinus fangiana HOM05D000289 ORTHO05D009609 7.0e-22 107.5 86 59.3
Dinv39898 Davidia involucrata HOM05D000289 ORTHO05D009609 2.6e-21 105.5 87 59.8
Gohir.D10G095100 Gossypium hirsutum HOM05D000289 ORTHO05D009609 5.0e-20 101.3 82 53.7
Thecc.01G050100 Theobroma cacao HOM05D000289 ORTHO05D009609 1.1e-19 100.1 88 55.7
COL.COLO4_11345 Corchorus olitorius HOM05D000289 ORTHO05D009609 1.9e-19 99.4 86 52.3
FAN26G0234 Fragaria x ananassa HOM05D000289 ORTHO05D009609 2.5e-19 99.0 87 51.7
FvH4_1g15000 Fragaria vesca HOM05D000289 ORTHO05D009609 3.2e-19 98.6 87 51.7
GSVIVG01005053001 Vitis vinifera HOM05D000289 ORTHO05D009609 4.2e-19 98.2 88 54.5
Gorai.011G104500 Gossypium raimondii HOM05D000289 ORTHO05D009609 7.2e-19 97.4 82 51.2
Lj2g0014406 Lotus japonicus HOM05D000289 ORTHO05D009609 7.2e-19 97.4 87 52.9
MD02G1163700 Malus domestica HOM05D000289 ORTHO05D009609 7.2e-19 97.4 87 54.0
Gohir.A10G093100 Gossypium hirsutum HOM05D000289 ORTHO05D009609 9.4e-19 97.1 82 52.4
Nn6g32098 Nelumbo nucifera HOM05D000289 ORTHO05D009609 1.2e-18 96.7 87 52.9
TAR628G0284 Trochodendron aralioides HOM05D000289 ORTHO05D009609 1.2e-18 96.7 87 51.7
Phvul.002G021800 Phaseolus vulgaris HOM05D000289 ORTHO05D009609 1.4e-17 93.2 85 52.9
Potri.007G038500 Populus trichocarpa HOM05D000289 ORTHO05D009609 1.4e-17 93.2 88 53.4
Glyma.11G059100 Glycine max HOM05D000289 ORTHO05D009609 3.0e-17 92.0 85 51.8
MBI16_g19910_MAGBIO Magnolia biondii HOM05D000289 ORTHO05D009609 3.0e-17 92.0 87 47.1
Prupe.7G140200 Prunus persica HOM05D000289 ORTHO05D009609 4.0e-17 91.7 85 52.9
PSO541G2148 Papaver somniferum HOM05D000289 ORTHO05D009609 8.8e-17 90.5 86 47.7
Actinidia30856 Actinidia chinensis HOM05D000289 ORTHO05D009609 1.5e-16 89.7 90 47.8
Medtr5g018250 Medicago truncatula HOM05D000289 ORTHO05D009609 2.0e-16 89.4 85 48.2
PSO675G0040 Papaver somniferum HOM05D000289 ORTHO05D009609 3.3e-16 88.6 86 45.3
Psat2g164680 Pisum sativum HOM05D000289 ORTHO05D009609 7.5e-16 87.4 87 43.7
Lalb_Chr09g0322971 Lupinus albus HOM05D000289 ORTHO05D009609 9.7e-16 87.0 84 52.4
PGSC0003DMG400010069 Solanum tuberosum HOM05D000289 ORTHO05D009609 1.3e-15 86.7 84 48.8
TWI53G1138 Tripterygium wilfordii HOM05D000289 ORTHO05D009609 1.3e-15 86.7 84 51.2
Sopen02g035070 Solanum pennellii HOM05D000289 ORTHO05D009609 2.2e-15 85.9 84 48.8
VMungo1215G1697 Vigna mungo HOM05D000289 ORTHO05D009609 3.7e-15 85.1 110 46.4
Duzib187G1431 Durio zibethinus HOM05D000289 ORTHO05D009609 4.8e-15 84.7 71 56.3
SGA_v2.0_scaffold204G41603 Striga asiatica HOM05D000289 ORTHO05D009609 4.8e-15 84.7 89 48.3
Ca_24799_v3 Cicer arietinum L. HOM05D000289 ORTHO05D009609 8.2e-15 84.0 85 48.2
Glyma.01G183200 Glycine max HOM05D000289 ORTHO05D009609 1.1e-14 83.6 110 43.6
THA.LOC104807574 Tarenaya hassleriana HOM05D000289 ORTHO05D009609 1.4e-14 83.2 89 47.2
vmacro17914 Vaccinium macrocarpon HOM05D000289 ORTHO05D009609 3.1e-14 82.0 87 46.0
HanXRQChr14g0430741 Helianthus annuus HOM05D000289 ORTHO05D009609 5.3e-14 81.3 79 49.4
Lsat_1_v5_gn_4_168300 Lactuca sativa HOM05D000289 ORTHO05D009609 5.3e-14 81.3 101 43.6
Rhsim08G0104600 Rhododendron simsii HOM05D000289 ORTHO05D009609 9.1e-14 80.5 87 43.7
Aqoxy6G00894 Aquilegia oxysepala HOM05D000289 ORTHO05D009609 1.2e-13 80.1 83 44.6
CANSAT01G1070 Cannabis sativa HOM05D000289 ORTHO05D009609 1.2e-13 80.1 87 46.0
CAN.G836.49 Capsicum annuum HOM05D000289 ORTHO05D009609 1.2e-13 80.1 85 44.7
ECA232G3611 Erigeron canadensis HOM05D000289 ORTHO05D009609 1.2e-13 80.1 113 42.5
CSS0030947 Camellia sinensis var. sinensis HOM05D000289 ORTHO05D009609 2.7e-13 79.0 114 41.2
TPR.G11350 Trifolium pratense HOM05D000289 ORTHO05D009609 2.7e-13 79.0 96 42.7
Manes.13G128900 Manihot esculenta HOM05D000289 ORTHO05D009609 3.5e-13 78.6 88 43.2
Nitab4.5_0002157g0050 Nicotiana tabacum HOM05D000289 ORTHO05D009609 1.3e-12 76.6 86 43.0
C08p39800 Brassica napus HOM05D000289 ORTHO05D009609 1.7e-12 76.3 105 39.0
BolC8t51552H Brassica oleracea HOM05D000289 ORTHO05D009609 1.7e-12 76.3 105 39.0
Carub.0004s0285 Capsella rubella HOM05D000289 ORTHO05D009609 1.7e-12 76.3 85 45.9
Cc03_g08140 Coffea canephora HOM05D000289 ORTHO05D009609 2.2e-12 75.9 72 48.6
Lj7A50T11 Lonicera japonica HOM05D000289 ORTHO05D009609 2.9e-12 75.5 88 40.9
Medtr5g018190 Medicago truncatula HOM05D000289 ORTHO05D009609 2.9e-12 75.5 76 44.7
Nitab4.5_0007024g0060 Nicotiana tabacum HOM05D000289 ORTHO05D009609 2.9e-12 75.5 85 44.7
RhsimUnG0071000 Rhododendron simsii HOM05D000289 ORTHO05D009609 2.9e-12 75.5 85 43.5
BcaC07g40980 Brassica carinata HOM05D000289 ORTHO05D009609 3.8e-12 75.1 105 39.0
Cfa003964 Carpinus fangiana HOM05D000289 ORTHO05D009609 5.0e-12 74.7 86 45.3
Thhalv10000566m.g Eutrema salsugineum HOM05D000289 ORTHO05D009609 6.5e-12 74.3 90 42.2
Haze_15457 Corylus avellana HOM05D000289 ORTHO05D009609 8.5e-12 73.9 86 45.3
Migut.H00471 Erythranthe guttata HOM05D000289 ORTHO05D009609 1.1e-11 73.6 87 44.8
AT2G23640 Arabidopsis thaliana HOM05D000289 ORTHO05D009609 1.5e-11 73.2 86 44.2
AL4G13610 Arabidopsis lyrata HOM05D000289 ORTHO05D009609 1.9e-11 72.8 86 44.2
CDE01G0553 Ceratophyllum demersum HOM05D000323 ORTHO05D000201 1.9e-11 72.8 78 43.6
Oeu004884.1 Olea europaea HOM05D000289 ORTHO05D009609 1.9e-11 72.8 94 42.6
Lj7A45G56 Lonicera japonica HOM05D000289 ORTHO05D009609 4.2e-11 71.6 88 39.8
arahy.Tifrunner.gnm1.ann1.SZY8GR Arachis hypogaea HOM05D000289 ORTHO05D009609 5.5e-11 71.2 76 46.1
BraA09t41075Z Brassica rapa HOM05D000289 ORTHO05D009609 7.2e-11 70.9 81 42.0
Medtr5g018080 Medicago truncatula HOM05D000289 ORTHO05D009609 7.2e-11 70.9 63 49.2
Peaxi162Scf00993g00335 Petunia axillaris HOM05D000289 ORTHO05D009609 7.2e-11 70.9 68 50.0
A09p56840 Brassica napus HOM05D000289 ORTHO05D009609 9.4e-11 70.5 112 36.6
Sp4g02610 Schrenkiella parvula HOM05D000289 ORTHO05D009609 1.2e-10 70.1 85 42.4
Thecc.01G050200 Theobroma cacao HOM05D015225 ORTHO05D009609 2.1e-10 69.3 113 38.9
DCAR_025702 Daucus carota HOM05D000289 ORTHO05D009609 2.7e-10 68.9 73 47.9
Aa31LG7G13220 Aethionema arabicum HOM05D000289 ORTHO05D009609 6.1e-10 67.8 81 38.3
Medtr5g018110 Medicago truncatula HOM05D000529 ORTHO05D009609 8.0e-10 67.4 65 44.6
Duzib264G0733 Durio zibethinus HOM05D015225 ORTHO05D009609 1.4e-09 66.6 79 45.6
FAN19G0017 Fragaria x ananassa HOM05D000289 ORTHO05D009609 2.3e-09 65.9 87 40.2
Hma1.2p1_2791F.1_g328620 Hydrangea macrophylla HOM05D000289 ORTHO05D009609 2.0e-08 62.8 87 36.8
COL.COLO4_11346 Corchorus olitorius HOM05D015225 ORTHO05D009609 1.7e-07 59.7 111 36.0
FAN28G0819 Fragaria x ananassa HOM05D000289 ORTHO05D009609 1.7e-07 59.7 87 37.9
SalBow1G4948 Salvia bowleyana HOM05D000289 ORTHO05D009609 1.7e-07 59.7 85 37.6
Mapoly0035s0106 Marchantia polymorpha HOM05D000289 ORTHO05D000208 1.8e-06 56.2 92 33.7
Solyc02g090370.4 Solanum lycopersicum HOM05D000289 ORTHO05D009609 2.4e-06 55.8 56 50.0
CsaV3_5G002290 Cucumis sativus L. HOM05D000289 ORTHO05D000208 3.1e-06 55.5 87 31.0
ClCG01G002190 Citrullus lanatus HOM05D000289 ORTHO05D000208 9.1e-06 53.9 86 30.2
SMO351G0148 Selaginella moellendorffii HOM05D000289 ORTHO05D000208 9.1e-06 53.9 74 36.5


User provided reference genes

Program Settings