Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.394 Acer truncatum HOM05D007434 ORTHO05D009541 1.7e-48 195.7 97 100.0
Atru.chr3.392 Acer truncatum HOM05D007434 ORTHO05D009541 1.3e-24 116.3 92 70.7
Atru.chr3.391 Acer truncatum HOM05D007434 ORTHO05D009541 5.5e-23 110.9 94 67.0
Ciclev10027106m.g Citrus clementina HOM05D007434 ORTHO05D009541 3.7e-19 98.2 95 58.9
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 2.6e-17 92.0 91 57.1
FAN23G2206 Fragaria x ananassa HOM05D007434 ORTHO05D009541 1.0e-13 80.1 101 51.5
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 3.0e-13 78.6 93 43.0
FvH4_1g15740 Fragaria vesca HOM05D007434 ORTHO05D009541 5.1e-13 77.8 100 51.0
ClCG01G016730 Citrullus lanatus HOM05D007434 ORTHO05D009541 1.9e-12 75.9 100 43.0
CsaV3_6G043150 Cucumis sativus L. HOM05D007434 ORTHO05D009541 2.5e-12 75.5 94 41.5
FAN28G0198 Fragaria x ananassa HOM05D007434 ORTHO05D009541 4.3e-12 74.7 100 50.0
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 9.7e-12 73.6 94 50.0
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 1.3e-11 73.2 93 47.3
MELO3C007552.2 Cucumis melo HOM05D007434 ORTHO05D009541 3.7e-11 71.6 94 40.4
CiPaw.01G021200 Carya illinoinensis HOM05D007434 ORTHO05D009541 6.3e-11 70.9 93 49.5
Nn1g05851 Nelumbo nucifera HOM05D007434 ORTHO05D009541 6.3e-11 70.9 89 38.2
MD15G1281800 Malus domestica HOM05D007434 ORTHO05D009541 1.1e-10 70.1 93 46.2
Potri.007G041500 Populus trichocarpa HOM05D007434 ORTHO05D009541 3.1e-10 68.6 92 43.5
CiPaw.02G009300 Carya illinoinensis HOM05D007434 ORTHO05D009541 1.2e-09 66.6 93 47.3
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 1.0e-08 63.5 88 43.2
Nn5g30204 Nelumbo nucifera HOM05D007434 ORTHO05D009541 1.3e-08 63.2 92 38.0
CSS0004315 Camellia sinensis var. sinensis HOM05D035102 ORTHO05D016155 1.7e-08 62.8 97 38.1
COL.COLO4_11386 Corchorus olitorius HOM05D007434 ORTHO05D009541 5.0e-08 61.2 96 41.7
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 5.0e-08 61.2 87 44.8
COL.COLO4_11385 Corchorus olitorius HOM05D007434 ORTHO05D009541 6.5e-08 60.8 86 41.9
Phvul.003G245500 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 6.5e-08 60.8 91 38.5
Sed0003827 Sechium edule HOM05D007434 ORTHO05D009541 6.5e-08 60.8 91 45.1
Glyma.11G057300 Glycine max HOM05D007434 ORTHO05D009541 1.1e-07 60.1 93 45.2
Medtr5g017710 Medicago truncatula HOM05D007434 ORTHO05D009541 1.1e-07 60.1 92 40.2
Glyma.17G176700 Glycine max HOM05D007434 ORTHO05D009541 1.4e-07 59.7 88 39.8
Lalb_Chr05g0226641 Lupinus albus HOM05D007434 ORTHO05D009541 1.4e-07 59.7 92 40.2
Lalb_Chr09g0333721 Lupinus albus HOM05D007434 ORTHO05D009541 2.5e-07 58.9 90 40.0
QL06p042201 Quercus lobata HOM05D007434 ORTHO05D009541 2.5e-07 58.9 89 39.3
Thecc.01G053200 Theobroma cacao HOM05D007434 ORTHO05D009541 2.5e-07 58.9 93 37.6
Manes.13G126400 Manihot esculenta HOM05D007434 ORTHO05D009541 4.2e-07 58.2 92 38.0
Migut.H00450 Erythranthe guttata HOM05D018578 ORTHO05D020597 7.2e-07 57.4 89 36.0
Lj2g0026149 Lotus japonicus HOM05D007434 ORTHO05D009541 7.2e-07 57.4 90 41.1
Glyma.05G084000 Glycine max HOM05D007434 ORTHO05D009541 1.2e-06 56.6 88 38.6
DCAR_010906 Daucus carota HOM05D007434 ORTHO05D009541 1.6e-06 56.2 91 39.6
Gohir.D11G197450 Gossypium hirsutum HOM05D007434 ORTHO05D009541 1.6e-06 56.2 93 40.9
Phvul.002G020200 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 1.6e-06 56.2 95 43.2
CiPaw.01G021300 Carya illinoinensis HOM05D007434 ORTHO05D009541 2.1e-06 55.8 85 40.0
Glyma.01G184900 Glycine max HOM05D007434 ORTHO05D009541 2.1e-06 55.8 92 43.5
Lj4g0021906 Lotus japonicus HOM05D007434 ORTHO05D009541 2.1e-06 55.8 91 39.6
Atru.chr3.395 Acer truncatum HOM05D007434 ORTHO05D013638 2.7e-06 55.5 100 36.0
Dinv39336 Davidia involucrata HOM05D035102 ORTHO05D016155 2.7e-06 55.5 103 34.0
TPR.G21269 Trifolium pratense HOM05D007434 ORTHO05D009541 3.6e-06 55.1 91 42.9
Aqoxy6G01381 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 6.1e-06 54.3 84 35.7
Haze_17565 Corylus avellana HOM05D016981 ORTHO05D016155 6.1e-06 54.3 90 35.6
Lalb_Chr05g0213231 Lupinus albus HOM05D007434 ORTHO05D009541 6.1e-06 54.3 91 40.7
TAR628G0228 Trochodendron aralioides HOM05D007434 ORTHO05D016155 6.1e-06 54.3 87 37.9
Lalb_Chr05g0213221 Lupinus albus HOM05D007434 ORTHO05D009541 7.9e-06 53.9 91 38.5


User provided reference genes

Program Settings