Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 9.4e-102 373.6 202 100.0
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 4.5e-27 125.6 199 47.7
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.3e-26 124.0 195 43.6
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.9e-26 122.9 195 45.1
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 4.9e-26 122.1 195 44.6
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 3.2e-25 119.4 198 44.4
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.7e-24 116.3 197 43.7
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 4.6e-24 115.5 196 42.9
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 7.9e-24 114.8 203 45.3
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 1.8e-23 113.6 198 48.0
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 4.3e-22 109.0 195 48.2
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 1.4e-20 104.0 108 56.5
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 1.4e-20 104.0 201 47.8
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 4.0e-20 102.4 195 46.2
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 5.3e-20 102.1 196 42.9
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.7e-18 97.1 202 41.6
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 6.5e-18 95.1 201 39.3
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 6.5e-18 95.1 206 39.3
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.9e-17 93.6 195 45.1
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.1e-16 90.1 83 60.2
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.7e-16 89.7 83 60.2
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 3.5e-16 89.4 235 36.2
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.8e-15 87.0 107 51.4
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 3.0e-15 86.3 203 40.9
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 5.1e-15 85.5 197 39.6
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 5.1e-15 85.5 107 51.4
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.7e-15 84.7 95 50.5
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 5.7e-14 82.0 200 38.0
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 5.7e-14 82.0 200 38.0
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 5.7e-14 82.0 200 38.0
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 2.1e-13 80.1 106 53.8
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 3.7e-13 79.3 124 43.5
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 6.2e-13 78.6 204 35.3
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 1.4e-12 77.4 95 50.5
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 1.8e-12 77.0 116 50.0
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.4e-12 76.6 105 47.6
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.4e-12 76.6 103 50.5
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 3.1e-12 76.3 107 49.5
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 4.1e-12 75.9 100 43.0
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 4.1e-12 75.9 101 50.5
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 5.3e-12 75.5 119 41.2
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 6.9e-12 75.1 89 46.1
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 9.0e-12 74.7 78 56.4
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 9.0e-12 74.7 107 51.4
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 1.2e-11 74.3 116 50.0
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 1.5e-11 73.9 89 50.6
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.6e-11 73.2 96 51.0
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 2.6e-11 73.2 81 53.1
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 4.5e-11 72.4 81 51.9
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 4.5e-11 72.4 106 45.3
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.3e-10 70.9 100 43.0
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 1.7e-10 70.5 95 42.1
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.7e-10 70.5 93 44.1
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 2.2e-10 70.1 101 43.6
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 2.9e-10 69.7 110 43.6
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.9e-10 69.7 86 48.8
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.8e-10 69.3 82 45.1
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 5.0e-10 68.9 98 46.9
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 6.5e-10 68.6 100 48.0
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.4e-09 67.4 112 48.2
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 1.4e-09 67.4 100 48.0
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.9e-09 67.0 114 41.2
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 2.5e-09 66.6 103 41.7
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 4.2e-09 65.9 88 44.3
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.2e-09 65.9 111 46.8
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 5.5e-09 65.5 98 39.8
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 7.1e-09 65.1 97 51.5
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 9.3e-09 64.7 90 46.7
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 1.6e-08 63.9 111 45.9
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.6e-08 63.9 207 32.9
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 1.6e-08 63.9 95 49.5
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 2.1e-08 63.5 104 42.3
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 2.1e-08 63.5 111 40.5
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 2.7e-08 63.2 132 38.6
PGR004G0898 Punica granatum HOM05D005967 ORTHO05D005174 2.7e-08 63.2 87 44.8
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 3.5e-08 62.8 80 50.0
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.6e-08 62.4 197 33.0
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 6.1e-08 62.0 101 38.6
Nitab4.5_0004094g0010 Nicotiana tabacum HOM05D005967 ORTHO05D005174 7.9e-08 61.6 94 42.6
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 1.0e-07 61.2 86 44.2
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.3e-07 60.8 197 33.0
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 2.3e-07 60.1 108 40.7
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 2.3e-07 60.1 111 37.8
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 3.9e-07 59.3 111 36.9
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 3.9e-07 59.3 91 45.1
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 5.1e-07 58.9 96 40.6
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 5.1e-07 58.9 104 44.2
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 6.7e-07 58.5 112 44.6
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.7e-07 58.5 96 42.7
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 6.7e-07 58.5 96 42.7
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.1e-06 57.8 86 41.9
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.5e-06 57.4 96 44.8
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 3.3e-06 56.2 103 34.0
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 3.3e-06 56.2 108 41.7
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 4.3e-06 55.8 85 42.4
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 9.7e-06 54.7 109 42.2
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 9.7e-06 54.7 101 42.6
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 9.7e-06 54.7 83 42.2


User provided reference genes

Program Settings