Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3891 Acer truncatum HOM05D003527 ORTHO05D004099 2.0e-58 228.8 109 100.0
Gohir.A07G097950 Gossypium hirsutum HOM05D003527 ORTHO05D004099 1.5e-16 89.7 52 80.8
Gohir.D07G102300 Gossypium hirsutum HOM05D003527 ORTHO05D004099 1.5e-16 89.7 52 80.8
Thecc.09G322900 Theobroma cacao HOM05D003527 ORTHO05D004099 2.5e-16 89.0 52 82.7
Dinv12411 Davidia involucrata HOM05D003527 ORTHO05D004099 3.3e-16 88.6 52 86.5
Actinidia34400 Actinidia chinensis HOM05D003527 ORTHO05D004099 9.5e-16 87.0 61 72.1
Duzib168G1608 Durio zibethinus HOM05D003527 ORTHO05D004099 9.5e-16 87.0 52 80.8
Gorai.001G110200 Gossypium raimondii HOM05D003527 ORTHO05D004099 1.2e-15 86.7 52 78.8
MD11G1110500 Malus domestica HOM05D003527 ORTHO05D004099 1.2e-15 86.7 55 74.5
Manes.04G034300 Manihot esculenta HOM05D003527 ORTHO05D004099 1.2e-15 86.7 52 84.6
Potri.001G238900 Populus trichocarpa HOM05D003527 ORTHO05D004099 1.2e-15 86.7 52 86.5
QL01p032299 Quercus lobata HOM05D003527 ORTHO05D004099 1.2e-15 86.7 52 84.6
TAR633G1470 Trochodendron aralioides HOM05D003527 ORTHO05D004099 1.2e-15 86.7 54 79.6
MD03G1096000 Malus domestica HOM05D003527 ORTHO05D004099 2.1e-15 85.9 56 69.6
Cpa.g.sc81.162 Carica papaya HOM05D003527 ORTHO05D004099 2.8e-15 85.5 53 81.1
TAR636G1653 Trochodendron aralioides HOM05D003527 ORTHO05D004099 2.8e-15 85.5 51 84.3
GSVIVG01024982001 Vitis vinifera HOM05D003527 ORTHO05D004099 3.6e-15 85.1 52 80.8
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.7e-15 84.7 57 80.7
Prupe.6G079000 Prunus persica HOM05D003527 ORTHO05D004099 6.1e-15 84.3 52 80.8
CiPaw.13G095400 Carya illinoinensis HOM05D003527 ORTHO05D004099 8.0e-15 84.0 53 84.9
Ciclev10029234m.g Citrus clementina HOM05D003527 ORTHO05D004099 1.0e-14 83.6 54 81.5
Nn2g10383 Nelumbo nucifera HOM05D003527 ORTHO05D004099 1.0e-14 83.6 52 78.8
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.0e-14 83.6 57 80.7
Duzib170G0558 Durio zibethinus HOM05D003527 ORTHO05D004099 1.4e-14 83.2 52 78.8
FAN16G0579 Fragaria x ananassa HOM05D003527 ORTHO05D004099 1.8e-14 82.8 52 76.9
FAN25G2547 Fragaria x ananassa HOM05D003527 ORTHO05D004099 1.8e-14 82.8 52 76.9
RcHm_v2.0_Chr2g0141581 Rosa chinensis HOM05D003527 ORTHO05D004099 1.8e-14 82.8 52 76.9
RcHm_v2.0_Chr5g0064221 Rosa chinensis HOM05D003527 ORTHO05D004099 1.8e-14 82.8 52 76.9
TWI74G0830 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 1.8e-14 82.8 51 80.4
Actinidia23946 Actinidia chinensis HOM05D003527 ORTHO05D004099 2.3e-14 82.4 52 80.8
MSTRG.19089 Avicennia marina HOM05D003527 ORTHO05D004099 3.0e-14 82.0 52 80.8
COL.COLO4_18499 Corchorus olitorius HOM05D003527 ORTHO05D004099 3.0e-14 82.0 54 74.1
FAN11G1093 Fragaria x ananassa HOM05D003527 ORTHO05D004099 4.0e-14 81.6 52 75.0
Aqoxy4G02910 Aquilegia oxysepala HOM05D003527 ORTHO05D004099 5.2e-14 81.3 52 76.9
Dinv35615 Davidia involucrata HOM05D003527 ORTHO05D004099 5.2e-14 81.3 52 78.8
FAN21G2526 Fragaria x ananassa HOM05D003527 ORTHO05D004099 5.2e-14 81.3 52 75.0
Lj2A96T67 Lonicera japonica HOM05D003527 ORTHO05D004099 5.2e-14 81.3 51 80.4
Atru.chr8.1961 Acer truncatum HOM05D003527 ORTHO05D004099 6.8e-14 80.9 55 74.5
Sabra09G0021000 Salix brachista HOM05D003527 ORTHO05D004099 8.9e-14 80.5 52 76.9
Haze_24084 Corylus avellana HOM05D003527 ORTHO05D004099 1.2e-13 80.1 52 78.8
Dinv37181 Davidia involucrata HOM05D003527 ORTHO05D004099 1.2e-13 80.1 52 76.9
CSS0027996 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.5e-13 79.7 52 76.9
Ciclev10012740m.g Citrus clementina HOM05D003527 ORTHO05D004099 1.5e-13 79.7 52 78.8
Migut.J00336 Erythranthe guttata HOM05D003527 ORTHO05D004099 1.5e-13 79.7 52 76.9
PSO339G4025 Papaver somniferum HOM05D003527 ORTHO05D004099 1.5e-13 79.7 52 80.8
PSO384G3887 Papaver somniferum HOM05D003527 ORTHO05D004099 1.5e-13 79.7 52 80.8
Gohir.A05G096000 Gossypium hirsutum HOM05D003527 ORTHO05D004099 3.4e-13 78.6 52 73.1
Gohir.D05G096200 Gossypium hirsutum HOM05D003527 ORTHO05D004099 3.4e-13 78.6 52 73.1
Gorai.009G099700 Gossypium raimondii HOM05D003527 ORTHO05D004099 3.4e-13 78.6 52 73.1
Sc12g0001550 Simmondsia chinensis HOM05D003527 ORTHO05D004099 3.4e-13 78.6 52 75.0
EL10Ac7g16007 Beta vulgaris HOM05D003527 ORTHO05D004099 5.8e-13 77.8 53 77.4
Duzib093G1072 Durio zibethinus HOM05D003527 ORTHO05D004099 5.8e-13 77.8 52 76.9
Eucgr.J02057 Eucalyptus grandis HOM05D003527 ORTHO05D004099 7.5e-13 77.4 53 75.5
Oeu024354.1 Olea europaea HOM05D003527 ORTHO05D004099 7.5e-13 77.4 51 76.5
QL07p048124 Quercus lobata HOM05D003527 ORTHO05D004099 7.5e-13 77.4 52 78.8
Ah.08g219410 Amaranthus hybridus HOM05D003527 ORTHO05D004099 1.3e-12 76.6 53 75.5
TAR623G1457 Trochodendron aralioides HOM05D003527 ORTHO05D004099 1.7e-12 76.3 75 54.7
Potri.009G030100 Populus trichocarpa HOM05D003527 ORTHO05D004099 2.2e-12 75.9 52 76.9
Sabra16G0144000 Salix brachista HOM05D003527 ORTHO05D004099 2.2e-12 75.9 52 80.8
Sed0026502 Sechium edule HOM05D003527 ORTHO05D004099 2.2e-12 75.9 52 75.0
Dinv16990 Davidia involucrata HOM05D003527 ORTHO05D004099 2.9e-12 75.5 70 64.3
Dinv42939 Davidia involucrata HOM05D003527 ORTHO05D004099 2.9e-12 75.5 70 64.3
Dinv43161 Davidia involucrata HOM05D003527 ORTHO05D004099 2.9e-12 75.5 70 64.3
ClCG02G020230 Citrullus lanatus HOM05D003527 ORTHO05D004099 4.9e-12 74.7 50 76.0
Hund04968 Selenicereus undatus HOM05D003527 ORTHO05D004099 4.9e-12 74.7 53 73.6
COL.COLO4_14818 Corchorus olitorius HOM05D003527 ORTHO05D004099 6.4e-12 74.3 51 74.5
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 6.4e-12 74.3 70 58.6
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 8.3e-12 73.9 71 60.6
Aqoxy2G02103 Aquilegia oxysepala HOM05D003527 ORTHO05D004099 1.1e-11 73.6 52 69.2
MELO3C025924.2 Cucumis melo HOM05D003527 ORTHO05D004099 1.1e-11 73.6 50 74.0
Hma1.2p1_1513F.1_g288070 Hydrangea macrophylla HOM05D003527 ORTHO05D004099 1.1e-11 73.6 53 73.6
Manes.09G089700 Manihot esculenta HOM05D003527 ORTHO05D004099 1.1e-11 73.6 52 69.2
Phvul.010G013400 Phaseolus vulgaris HOM05D003527 ORTHO05D004099 1.1e-11 73.6 52 71.2
Thecc.05G040900 Theobroma cacao HOM05D003527 ORTHO05D004099 1.1e-11 73.6 51 74.5
MSTRG.5670 Avicennia marina HOM05D003527 ORTHO05D004099 1.4e-11 73.2 52 75.0
Glyma.03G082900 Glycine max HOM05D003527 ORTHO05D004099 1.4e-11 73.2 52 71.2
Peaxi162Scf00165g01520 Petunia axillaris HOM05D003527 ORTHO05D004099 1.4e-11 73.2 52 73.1
Potri.006G084400 Populus trichocarpa HOM05D003527 ORTHO05D004099 1.4e-11 73.2 52 71.2
GSVIVG01034186001 Vitis vinifera HOM05D003527 ORTHO05D004099 1.4e-11 73.2 52 75.0
CiPaw.09G191600 Carya illinoinensis HOM05D003527 ORTHO05D004099 1.9e-11 72.8 52 73.1
Cc06_g02720 Coffea canephora HOM05D003527 ORTHO05D004099 2.4e-11 72.4 52 75.0
Gohir.D11G345500 Gossypium hirsutum HOM05D003527 ORTHO05D004099 2.4e-11 72.4 53 71.7
LjContig00564g0015687 Lotus japonicus HOM05D003527 ORTHO05D004099 2.4e-11 72.4 54 70.4
TPR.G23255 Trifolium pratense HOM05D003527 ORTHO05D004099 2.4e-11 72.4 52 71.2
Sed0011659 Sechium edule HOM05D003527 ORTHO05D004099 3.2e-11 72.0 52 69.2
Haze_20770 Corylus avellana HOM05D003527 ORTHO05D004099 4.1e-11 71.6 51 74.5
Medtr7g059410 Medicago truncatula HOM05D003527 ORTHO05D004099 4.1e-11 71.6 54 68.5
CANSAT35G0216 Cannabis sativa HOM05D003527 ORTHO05D004099 5.4e-11 71.2 52 71.2
Duzib128G0537 Durio zibethinus HOM05D003527 ORTHO05D004099 5.4e-11 71.2 51 72.5
AUR62001798 Chenopodium quinoa HOM05D003527 ORTHO05D004099 7.0e-11 70.9 53 73.6
AUR62009585 Chenopodium quinoa HOM05D003527 ORTHO05D004099 7.0e-11 70.9 53 73.6
ClCG10G021090 Citrullus lanatus HOM05D003527 ORTHO05D004099 7.0e-11 70.9 52 71.2
Hund18916 Selenicereus undatus HOM05D003527 ORTHO05D004099 7.0e-11 70.9 54 74.1
Gohir.A11G326600 Gossypium hirsutum HOM05D003527 ORTHO05D004099 9.2e-11 70.5 53 69.8
Nitab4.5_0001800g0180 Nicotiana tabacum HOM05D003527 ORTHO05D004099 9.2e-11 70.5 53 73.6
Actinidia26460 Actinidia chinensis HOM05D003527 ORTHO05D004099 1.6e-10 69.7 52 73.1
Glyma.13G335402 Glycine max HOM05D003527 ORTHO05D004099 1.6e-10 69.7 53 69.8
Manes.08G081800 Manihot esculenta HOM05D003527 ORTHO05D004099 2.0e-10 69.3 52 67.3
Nn5g26928 Nelumbo nucifera HOM05D003527 ORTHO05D004099 2.0e-10 69.3 52 67.3
SalBow3G4662 Salvia bowleyana HOM05D003527 ORTHO05D004099 2.0e-10 69.3 56 58.9
Rhsim13G0083400 Rhododendron simsii HOM05D003527 ORTHO05D004099 2.7e-10 68.9 52 67.3
Ca_26083_v3 Cicer arietinum L. HOM05D003527 ORTHO05D004099 3.5e-10 68.6 53 71.7
arahy.Tifrunner.gnm1.ann1.95G3UD Arachis hypogaea HOM05D003527 ORTHO05D004099 4.6e-10 68.2 52 67.3
arahy.Tifrunner.gnm1.ann1.QWF1SC Arachis hypogaea HOM05D003527 ORTHO05D004099 4.6e-10 68.2 52 67.3
CsaV3_3G034940 Cucumis sativus L. HOM05D003527 ORTHO05D004099 6.0e-10 67.8 52 67.3
CDE02G3270 Ceratophyllum demersum HOM05D003527 ORTHO05D004099 1.3e-09 66.6 54 59.3
ECA236G2982 Erigeron canadensis HOM05D003527 ORTHO05D004099 1.3e-09 66.6 52 67.3
MD04G1127100 Malus domestica HOM05D003527 ORTHO05D004099 1.3e-09 66.6 56 64.3
TWI79G0031 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 1.3e-09 66.6 54 61.1
Ca_12948_v3 Cicer arietinum L. HOM05D003527 ORTHO05D004099 1.7e-09 66.2 54 64.8
Glyma.15G039000 Glycine max HOM05D003527 ORTHO05D004099 1.7e-09 66.2 53 67.9
MBI14_g37823_MAGBIO Magnolia biondii HOM05D003527 ORTHO05D004099 1.7e-09 66.2 52 63.5
CDE08G1604 Ceratophyllum demersum HOM05D003527 ORTHO05D004099 2.3e-09 65.9 59 54.2
MBI05_g30238_MAGBIO Magnolia biondii HOM05D003527 ORTHO05D004099 2.3e-09 65.9 52 61.5
Eucgr.K03143 Eucalyptus grandis HOM05D003527 ORTHO05D004099 3.0e-09 65.5 67 56.7
Lj3g0018686 Lotus japonicus HOM05D003527 ORTHO05D004099 3.9e-09 65.1 53 66.0
Sopen09g005410 Solanum pennellii HOM05D003527 ORTHO05D004099 3.9e-09 65.1 69 53.6
Lalb_Chr13g0291191 Lupinus albus HOM05D003527 ORTHO05D004099 6.6e-09 64.3 53 67.9
PSO151G0026 Papaver somniferum HOM05D003527 ORTHO05D004099 6.6e-09 64.3 55 63.6
PSO339G2088 Papaver somniferum HOM05D003527 ORTHO05D004099 6.6e-09 64.3 55 63.6
PGR004G1376 Punica granatum HOM05D003527 ORTHO05D004099 6.6e-09 64.3 56 66.1
Lalb_Chr07g0193911 Lupinus albus HOM05D003527 ORTHO05D004099 8.6e-09 63.9 53 62.3
TWI31G0174 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 8.6e-09 63.9 52 63.5
ClCG04G008250 Citrullus lanatus HOM05D003527 ORTHO05D004099 1.1e-08 63.5 64 57.8
Psat0s4138g0040 Pisum sativum HOM05D003527 ORTHO05D004099 1.1e-08 63.5 53 66.0
vmacro20143 Vaccinium macrocarpon HOM05D003527 ORTHO05D004099 1.5e-08 63.2 54 63.0
arahy.Tifrunner.gnm1.ann1.6Q00VM Arachis hypogaea HOM05D003527 ORTHO05D004099 1.9e-08 62.8 52 59.6
CiPaw.10G145200 Carya illinoinensis HOM05D003527 ORTHO05D004099 1.9e-08 62.8 53 67.9
Medtr2g096780 Medicago truncatula HOM05D003527 ORTHO05D004099 1.9e-08 62.8 52 65.4
RcHm_v2.0_Chr3g0466801 Rosa chinensis HOM05D003527 ORTHO05D004099 1.9e-08 62.8 52 61.5
VMungo1383G0208 Vigna mungo HOM05D003527 ORTHO05D004099 1.9e-08 62.8 52 67.3
MELO3C003124.2 Cucumis melo HOM05D003527 ORTHO05D004099 2.5e-08 62.4 64 57.8
CsaV3_4G024920 Cucumis sativus L. HOM05D003527 ORTHO05D004099 2.5e-08 62.4 64 57.8
FAN05G0377 Fragaria x ananassa HOM05D003527 ORTHO05D004099 2.5e-08 62.4 53 67.9
FAN09G0639 Fragaria x ananassa HOM05D003527 ORTHO05D004099 2.5e-08 62.4 53 67.9
FAN09G3248 Fragaria x ananassa HOM05D003527 ORTHO05D004099 2.5e-08 62.4 53 67.9
FAN14G4675 Fragaria x ananassa HOM05D003527 ORTHO05D004099 2.5e-08 62.4 53 67.9
DCAR_005975 Daucus carota HOM05D003527 ORTHO05D004099 3.3e-08 62.0 52 67.3
Glyma.08G358400 Glycine max HOM05D003527 ORTHO05D004099 4.3e-08 61.6 52 65.4
FvH4_6g13980 Fragaria vesca HOM05D003527 ORTHO05D004099 5.6e-08 61.2 52 65.4
HanXRQChr05g0134511 Helianthus annuus HOM05D003527 ORTHO05D004099 9.5e-08 60.5 52 59.6
Lsat_1_v5_gn_8_75920 Lactuca sativa HOM05D003527 ORTHO05D004099 9.5e-08 60.5 52 59.6
Phvul.008G099800 Phaseolus vulgaris HOM05D003527 ORTHO05D004099 9.5e-08 60.5 52 65.4
CSS0044295 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.2e-07 60.1 54 63.0
TPR.G5587 Trifolium pratense HOM05D003527 ORTHO05D004099 1.2e-07 60.1 53 66.0
FAN02G4097 Fragaria x ananassa HOM05D003527 ORTHO05D004099 1.6e-07 59.7 53 66.0
Phvul.L004843 Phaseolus vulgaris HOM05D003527 ORTHO05D004099 1.6e-07 59.7 56 62.5
Lalb_Chr03g0035091 Lupinus albus HOM05D003527 ORTHO05D004099 2.8e-07 58.9 53 66.0
HanXRQChr08g0234711 Helianthus annuus HOM05D003527 ORTHO05D004099 8.0e-07 57.4 52 61.5
VMungo1080G1739 Vigna mungo HOM05D003527 ORTHO05D004099 8.0e-07 57.4 55 60.0
Lalb_Chr03g0042111 Lupinus albus HOM05D003527 ORTHO05D004099 1.4e-06 56.6 53 64.2
TPR.G34322 Trifolium pratense HOM05D003527 ORTHO05D004099 2.3e-06 55.8 46 69.6
ATR0559G115 Amborella trichopoda HOM05D003527 ORTHO05D004099 3.1e-06 55.5 55 61.8
ECA247G3528 Erigeron canadensis HOM05D003527 ORTHO05D004099 3.1e-06 55.5 52 59.6
PGR102G2755 Punica granatum HOM05D003527 ORTHO05D004099 3.1e-06 55.5 61 54.1
Sc01g0004200 Simmondsia chinensis HOM05D003527 ORTHO05D004099 3.1e-06 55.5 88 40.9
ATR0680G191 Amborella trichopoda HOM05D003527 ORTHO05D004099 5.2e-06 54.7 51 58.8
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 6.8e-06 54.3 55 63.6
Lsat_1_v5_gn_9_23221 Lactuca sativa HOM05D003527 ORTHO05D004099 8.9e-06 53.9 58 56.9


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