Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3710 Acer truncatum HOM05D002685 ORTHO05D001487 7.0e-86 320.9 197 100.0
Atru.chr11.2379 Acer truncatum HOM05D002685 ORTHO05D001487 8.5e-15 84.7 100 57.0
Cfa009398 Carpinus fangiana HOM05D002685 ORTHO05D001487 5.5e-14 82.0 136 47.1
Thecc.02G200000 Theobroma cacao HOM05D002685 ORTHO05D001487 1.2e-13 80.9 128 42.2
Haze_12458 Corylus avellana HOM05D002685 ORTHO05D001487 1.6e-13 80.5 101 53.5
Prupe.1G221500 Prunus persica HOM05D002685 ORTHO05D001487 1.6e-13 80.5 133 45.9
Potri.003G167500 Populus trichocarpa HOM05D002685 ORTHO05D001487 2.3e-12 76.6 88 55.7
Lalb_Chr10g0092001 Lupinus albus HOM05D002685 ORTHO05D001487 1.5e-11 73.9 95 50.5
Sabra03G0122800 Salix brachista HOM05D002685 ORTHO05D001487 4.4e-11 72.4 97 48.5
CiPaw.05G105900 Carya illinoinensis HOM05D002685 ORTHO05D001487 7.4e-11 71.6 104 48.1
vmacro01042 Vaccinium macrocarpon HOM05D002685 ORTHO05D001487 9.7e-11 71.2 122 45.1
Phvul.008G016600 Phaseolus vulgaris HOM05D002685 ORTHO05D001487 4.8e-10 68.9 61 60.7
CANSAT01G2764 Cannabis sativa HOM05D002685 ORTHO05D001487 1.1e-09 67.8 48 68.8
Phvul.008G016500 Phaseolus vulgaris HOM05D002685 ORTHO05D001487 1.1e-09 67.8 52 63.5
Glyma.18G284900 Glycine max HOM05D002685 ORTHO05D001487 1.4e-09 67.4 71 56.3
THA.LOC104801613 Tarenaya hassleriana HOM05D002685 ORTHO05D001487 1.4e-09 67.4 71 57.7
Duzib052G0088 Durio zibethinus HOM05D002685 ORTHO05D001487 1.8e-09 67.0 100 48.0
MD13G1123300 Malus domestica HOM05D002685 ORTHO05D001487 1.8e-09 67.0 101 44.6
Lj1g0010375 Lotus japonicus HOM05D002685 ORTHO05D001487 2.4e-09 66.6 88 51.1
PGR119G2530 Punica granatum HOM05D002685 ORTHO05D001487 2.4e-09 66.6 106 43.4
Glyma.02G096400 Glycine max HOM05D002685 ORTHO05D001487 4.1e-09 65.9 69 55.1
Duzib052G1163 Durio zibethinus HOM05D002685 ORTHO05D001487 7.0e-09 65.1 100 47.0
Cpa.g.sc96.31 Carica papaya HOM05D002685 ORTHO05D001487 9.1e-09 64.7 72 56.9
CSS0035629 Camellia sinensis var. sinensis HOM05D002685 ORTHO05D001487 1.6e-08 63.9 111 40.5
QL03p051288 Quercus lobata HOM05D002685 ORTHO05D001487 1.6e-08 63.9 93 47.3
GSVIVG01000923001 Vitis vinifera HOM05D002685 ORTHO05D001487 1.6e-08 63.9 73 53.4
Actinidia30619 Actinidia chinensis HOM05D002685 ORTHO05D001487 2.0e-08 63.5 43 69.8
SalBow2G0840 Salvia bowleyana HOM05D002685 ORTHO05D001487 3.5e-08 62.8 62 56.5
TAR629G2320 Trochodendron aralioides HOM05D002685 ORTHO05D001487 4.5e-08 62.4 107 41.1
Ciclev10031823m.g Citrus clementina HOM05D002685 ORTHO05D001487 5.9e-08 62.0 53 60.4
SalBow2G0376 Salvia bowleyana HOM05D002685 ORTHO05D001487 5.9e-08 62.0 62 56.5
Nn8g41102 Nelumbo nucifera HOM05D002685 ORTHO05D001487 1.3e-07 60.8 66 51.5
VMungo1383G1702 Vigna mungo HOM05D002685 ORTHO05D001487 2.2e-07 60.1 94 44.7
Nn8g41103 Nelumbo nucifera HOM05D002685 ORTHO05D001487 2.9e-07 59.7 112 38.4
COL.COLO4_24722 Corchorus olitorius HOM05D002685 ORTHO05D001487 5.0e-07 58.9 47 63.8
Nitab4.5_0003401g0090 Nicotiana tabacum HOM05D002685 ORTHO05D001487 5.0e-07 58.9 44 65.9
VMungo1383G0720 Vigna mungo HOM05D002685 ORTHO05D001487 6.5e-07 58.5 77 50.6
ClCG07G015360 Citrullus lanatus HOM05D002685 ORTHO05D001487 5.5e-06 55.5 80 47.5
MELO3C017749.2 Cucumis melo HOM05D002685 ORTHO05D001487 7.2e-06 55.1 143 34.3
FAN17G2673 Fragaria x ananassa HOM05D002685 ORTHO05D001487 9.4e-06 54.7 103 39.8
Lsat_1_v5_gn_4_2061 Lactuca sativa HOM05D002685 ORTHO05D001487 9.4e-06 54.7 89 40.4
Psat3g186840 Pisum sativum HOM05D002685 ORTHO05D001487 9.4e-06 54.7 99 43.4


User provided reference genes

Program Settings