Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.366 Acer truncatum HOM05D009141 ORTHO05D010689 4.8e-57 225.3 117 100.0
Atru.chr3.363 Acer truncatum HOM05D009141 ORTHO05D010689 7.7e-55 218.0 117 97.4
Atru.chr3.368 Acer truncatum HOM05D009141 ORTHO05D010689 9.7e-42 174.5 118 79.7
Atru.chr3.371 Acer truncatum HOM05D009141 ORTHO05D010689 9.1e-32 141.4 116 69.8
Atru.chr3.383 Acer truncatum HOM05D009141 ORTHO05D010689 9.1e-32 141.4 116 69.8
QL06p042164 Quercus lobata HOM05D017207 ORTHO05D010689 7.3e-13 78.6 133 42.1
Lj7C67T0 Lonicera japonica HOM05D009141 ORTHO05D010689 2.8e-12 76.6 111 43.2
Lj7C66T3 Lonicera japonica HOM05D009141 ORTHO05D010689 1.0e-11 74.7 111 43.2
Duzib264G1041 Durio zibethinus HOM05D009141 ORTHO05D010689 2.3e-11 73.6 126 39.7
Gohir.A02G159600 Gossypium hirsutum HOM05D009141 ORTHO05D010689 3.1e-11 73.2 97 43.3
Gohir.D03G020750 Gossypium hirsutum HOM05D009141 ORTHO05D010689 3.1e-11 73.2 102 43.1
Cfa003999 Carpinus fangiana HOM05D017207 ORTHO05D010689 4.0e-11 72.8 108 43.5
Gorai.003G021900 Gossypium raimondii HOM05D009141 ORTHO05D010689 4.0e-11 72.8 88 45.5
Gohir.D03G021033 Gossypium hirsutum HOM05D009141 ORTHO05D010689 5.2e-11 72.4 88 44.3
COL.COLO4_11387 Corchorus olitorius HOM05D009141 ORTHO05D010689 3.4e-10 69.7 111 45.9
Gorai.003G021500 Gossypium raimondii HOM05D009141 ORTHO05D010689 3.4e-10 69.7 102 42.2
CiPaw.01G021100 Carya illinoinensis HOM05D017207 ORTHO05D010689 4.4e-10 69.3 166 35.5
Gohir.A02G159500 Gossypium hirsutum HOM05D009141 ORTHO05D010689 5.8e-10 68.9 116 41.4
Gohir.D03G021066 Gossypium hirsutum HOM05D009141 ORTHO05D010689 5.8e-10 68.9 116 40.5
Gohir.D03G020500 Gossypium hirsutum HOM05D009141 ORTHO05D010689 7.5e-10 68.6 102 41.2
Gorai.003G022600 Gossypium raimondii HOM05D009141 ORTHO05D010689 1.3e-09 67.8 116 40.5
Lj7C64T6 Lonicera japonica HOM05D009141 ORTHO05D010689 1.3e-09 67.8 123 39.8
Gohir.A02G159550 Gossypium hirsutum HOM05D009141 ORTHO05D010689 1.7e-09 67.4 81 45.7
Manes.12G100100 Manihot esculenta HOM05D061944 ORTHO05D012940 2.9e-09 66.6 99 46.5
CiPaw.02G009200 Carya illinoinensis HOM05D017207 ORTHO05D010689 3.7e-09 66.2 144 32.6
Gohir.D03G020900 Gossypium hirsutum HOM05D009141 ORTHO05D010689 3.7e-09 66.2 83 44.6
Atru.chr3.393 Acer truncatum HOM05D009141 ORTHO05D010689 8.3e-09 65.1 118 49.2
Duzib187G0488 Durio zibethinus HOM05D009141 ORTHO05D010689 3.2e-08 63.2 123 39.0
Duzib187G1080 Durio zibethinus HOM05D009141 ORTHO05D010689 5.4e-08 62.4 141 35.5
Potri.005G136700 Populus trichocarpa HOM05D025385 ORTHO05D026080 7.0e-08 62.0 129 37.2
Duzib187G1857 Durio zibethinus HOM05D009141 ORTHO05D010689 6.0e-07 58.9 141 34.8
Gorai.003G022500 Gossypium raimondii HOM05D009141 ORTHO05D010689 7.8e-07 58.5 78 41.0
ECA232G1274 Erigeron canadensis HOM05D009141 ORTHO05D010689 1.0e-06 58.2 108 33.3
Glyma.01G185000 Glycine max HOM05D010320 ORTHO05D012509 1.0e-06 58.2 103 44.7
Gohir.D03G020400 Gossypium hirsutum HOM05D009141 ORTHO05D010689 1.0e-06 58.2 88 40.9
DCAR_025722 Daucus carota HOM05D009141 ORTHO05D010689 1.3e-06 57.8 106 40.6
CiPaw.01G020800 Carya illinoinensis HOM05D017207 ORTHO05D010689 2.3e-06 57.0 167 32.9
Lj7C67G1 Lonicera japonica HOM05D009141 ORTHO05D010689 2.3e-06 57.0 82 40.2


User provided reference genes

Program Settings