Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 5.1e-41 170.6 86 100.0
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 2.0e-29 132.1 86 77.9
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 1.7e-28 129.0 86 74.4
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 4.2e-27 124.4 86 74.4
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 4.2e-27 124.4 86 73.3
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 4.2e-27 124.4 86 72.1
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 9.4e-27 123.2 86 74.4
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 2.7e-26 121.7 86 68.6
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 6.1e-26 120.6 86 73.3
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 1.0e-25 119.8 86 69.8
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 1.8e-25 119.0 86 73.3
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 1.8e-25 119.0 86 70.9
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 2.3e-25 118.6 86 72.1
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 3.0e-25 118.2 86 69.8
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 3.0e-25 118.2 86 72.1
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 2.0e-24 115.5 86 69.8
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 3.3e-24 114.8 86 69.8
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 3.3e-24 114.8 86 68.6
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 4.4e-24 114.4 86 67.4
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 4.4e-24 114.4 85 67.1
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 5.7e-24 114.0 86 67.4
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 7.5e-24 113.6 80 72.5
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 7.5e-24 113.6 86 68.6
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.3e-23 112.8 86 66.3
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 1.3e-23 112.8 84 65.5
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 1.7e-23 112.5 86 68.6
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 1.7e-23 112.5 86 65.1
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 1.7e-23 112.5 86 65.1
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 1.7e-23 112.5 86 68.6
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 2.8e-23 111.7 86 66.3
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 2.8e-23 111.7 86 66.3
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 3.7e-23 111.3 86 66.3
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 4.8e-23 110.9 91 62.6
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 4.8e-23 110.9 86 68.6
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 8.3e-23 110.2 86 66.3
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 8.3e-23 110.2 86 67.4
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 1.1e-22 109.8 86 65.1
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.1e-22 109.8 86 68.6
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 1.8e-22 109.0 86 65.1
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 1.8e-22 109.0 86 66.3
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 2.4e-22 108.6 87 64.4
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 2.4e-22 108.6 87 64.4
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 2.4e-22 108.6 87 64.4
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 2.4e-22 108.6 87 64.4
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 2.4e-22 108.6 87 64.4
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 2.4e-22 108.6 86 65.1
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 3.1e-22 108.2 84 64.3
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 3.1e-22 108.2 86 65.1
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 4.1e-22 107.8 86 65.1
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 4.1e-22 107.8 91 62.6
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 4.1e-22 107.8 86 59.3
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 5.3e-22 107.5 86 65.1
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 1.2e-21 106.3 86 64.0
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 1.2e-21 106.3 79 64.6
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 1.2e-21 106.3 86 65.1
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.6e-21 105.9 83 68.7
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 1.6e-21 105.9 91 61.5
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 1.6e-21 105.9 85 68.2
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.0e-21 105.5 86 59.3
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 2.0e-21 105.5 86 64.0
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 2.0e-21 105.5 86 62.8
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 3.5e-21 104.8 83 61.4
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 4.5e-21 104.4 86 62.8
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 4.5e-21 104.4 86 62.8
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 5.9e-21 104.0 86 62.8
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 7.7e-21 103.6 87 63.2
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 7.7e-21 103.6 86 61.6
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 1.0e-20 103.2 87 62.1
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 1.0e-20 103.2 87 64.4
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 1.0e-20 103.2 88 59.1
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 1.7e-20 102.4 86 62.8
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 2.2e-20 102.1 86 61.6
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 2.9e-20 101.7 86 58.1
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.9e-20 101.7 86 58.1
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 8.5e-20 100.1 86 58.1
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 8.5e-20 100.1 86 58.1
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.1e-19 99.8 86 60.5
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 1.1e-19 99.8 84 64.3
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 1.5e-19 99.4 82 61.0
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 1.5e-19 99.4 86 59.3
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 1.9e-19 99.0 81 65.4
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 3.2e-19 98.2 82 64.6
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 3.2e-19 98.2 86 58.1
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 5.5e-19 97.4 86 58.1
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 5.5e-19 97.4 85 52.9
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 9.4e-19 96.7 86 58.1
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 2.7e-18 95.1 86 53.5
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 2.7e-18 95.1 86 54.7
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 3.6e-18 94.7 82 58.5
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 4.7e-18 94.4 79 55.7
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 1.0e-17 93.2 75 65.3
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 1.0e-17 93.2 85 56.5
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.8e-17 92.4 74 60.8
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 8.8e-17 90.1 87 56.3
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 1.5e-16 89.4 86 53.5
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 3.4e-16 88.2 83 56.6
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 1.3e-15 86.3 85 52.9
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 5.9e-13 77.4 174 32.2
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 1.3e-12 76.3 86 45.3
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 1.7e-12 75.9 88 48.9
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 6.6e-12 73.9 88 47.7
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 3.3e-11 71.6 66 50.0
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 1.6e-10 69.3 95 45.3
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 5.2e-09 64.3 92 38.0
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 1.2e-08 63.2 89 46.1
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 9.8e-08 60.1 94 39.4
SHI06100 Sapria himalayana HOM05D006634 ORTHO05D008282 2.2e-07 58.9 43 67.4
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 4.9e-07 57.8 51 58.8
A04p21560 Brassica napus HOM05D006634 ORTHO05D008282 1.1e-06 56.6 41 63.4
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 1.1e-06 56.6 52 51.9
HPP92_022576 Vanilla planifolia HOM05D006634 ORTHO05D008282 1.1e-06 56.6 40 77.5
Actinidia20457 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.8e-06 55.8 53 54.7
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 7.0e-06 53.9 41 68.3
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 7.0e-06 53.9 47 57.4
arahy.Tifrunner.gnm1.ann1.RL700P Arachis hypogaea HOM05D006503 ORTHO05D008116 9.2e-06 53.5 56 53.6
Haze_23826 Corylus avellana HOM05D025838 ORTHO05D008282 9.2e-06 53.5 31 74.2


User provided reference genes

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