Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3552 Acer truncatum HOM05D004776 ORTHO05D005777 1.3e-85 319.7 159 100.0
vmacro14409 Vaccinium macrocarpon HOM05D004776 ORTHO05D005777 5.5e-81 304.3 159 92.5
Hma1.2p1_0569F.1_g180290 Hydrangea macrophylla HOM05D004776 ORTHO05D005777 7.2e-81 303.9 159 91.8
Actinidia20436 Actinidia chinensis HOM05D004776 ORTHO05D005777 8.0e-80 300.4 159 90.6
TWI79G1687 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 1.4e-79 299.7 159 89.9
Ciclev10028099m.g Citrus clementina HOM05D004776 ORTHO05D005777 1.8e-79 299.3 159 92.5
QL01p015865 Quercus lobata HOM05D004776 ORTHO05D005777 1.8e-79 299.3 158 90.5
CiPaw.13G118600 Carya illinoinensis HOM05D004776 ORTHO05D005777 2.3e-79 298.9 159 89.9
CANSAT54G2950 Cannabis sativa HOM05D004776 ORTHO05D005777 3.9e-79 298.1 159 89.3
DCAR_006106 Daucus carota HOM05D004776 ORTHO05D005777 3.9e-79 298.1 159 88.7
Haze_23751 Corylus avellana HOM05D004776 ORTHO05D005777 5.2e-79 297.7 159 88.7
Phvul.005G131900 Phaseolus vulgaris HOM05D004776 ORTHO05D005777 5.2e-79 297.7 159 91.2
Potri.009G007900 Populus trichocarpa HOM05D004776 ORTHO05D005777 5.2e-79 297.7 159 89.3
VMungo1080G0818 Vigna mungo HOM05D004776 ORTHO05D006187 5.2e-79 297.7 159 91.2
GSVIVG01031509001 Vitis vinifera HOM05D004776 ORTHO05D005777 8.8e-79 297.0 159 89.3
Lj3g0025221 Lotus japonicus HOM05D004776 ORTHO05D005777 1.1e-78 296.6 159 90.6
Duzib170G0082 Durio zibethinus HOM05D004776 ORTHO05D005777 1.5e-78 296.2 159 88.1
HanXRQChr11g0346181 Helianthus annuus HOM05D004776 ORTHO05D005777 1.5e-78 296.2 159 89.3
TWI31G0757 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 2.6e-78 295.4 159 87.4
Actinidia03704 Actinidia chinensis HOM05D004776 ORTHO05D005777 3.3e-78 295.0 159 88.7
Prupe.6G108100 Prunus persica HOM05D004776 ORTHO05D005777 3.3e-78 295.0 159 89.3
Manes.04G015500 Manihot esculenta HOM05D004776 ORTHO05D005777 4.4e-78 294.7 159 88.7
Thecc.09G348100 Theobroma cacao HOM05D004776 ORTHO05D005777 4.4e-78 294.7 159 86.8
Medtr2g095420 Medicago truncatula HOM05D004776 ORTHO05D005777 5.7e-78 294.3 159 89.9
CSS0005795 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 9.7e-78 293.5 159 89.3
Cc01_g10560 Coffea canephora HOM05D004776 ORTHO05D005777 9.7e-78 293.5 159 85.5
COL.COLO4_34701 Corchorus olitorius HOM05D004776 ORTHO05D005777 9.7e-78 293.5 159 87.4
Duzib168G1494 Durio zibethinus HOM05D004776 ORTHO05D005777 1.3e-77 293.1 159 86.8
Eucgr.B02538 Eucalyptus grandis HOM05D004776 ORTHO05D005777 1.7e-77 292.7 159 86.8
Glyma.13G323400 Glycine max HOM05D004776 ORTHO05D005777 1.7e-77 292.7 159 89.3
CsaV3_1G013400 Cucumis sativus L. HOM05D004776 ORTHO05D005777 2.8e-77 292.0 159 87.4
RcHm_v2.0_Chr2g0122071 Rosa chinensis HOM05D004776 ORTHO05D005777 2.8e-77 292.0 159 88.1
SalBow3G4083 Salvia bowleyana HOM05D004776 ORTHO05D005777 2.8e-77 292.0 159 86.8
CSS0042525 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 3.7e-77 291.6 159 88.7
Gorai.013G268700 Gossypium raimondii HOM05D004776 ORTHO05D005777 3.7e-77 291.6 159 87.4
Psat0s3241g0040 Pisum sativum HOM05D004776 ORTHO05D005777 3.7e-77 291.6 159 89.3
Gorai.003G144600 Gossypium raimondii HOM05D004776 ORTHO05D005777 4.8e-77 291.2 159 85.5
Sed0027733 Sechium edule HOM05D004776 ORTHO05D005777 4.8e-77 291.2 159 87.4
SGA_v2.0_scaffold116G32209 Striga asiatica HOM05D004776 ORTHO05D005777 8.2e-77 290.4 159 87.4
TPR.G11629 Trifolium pratense HOM05D004776 ORTHO05D005777 1.4e-76 289.7 159 88.7
Aqoxy2G01783 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 1.8e-76 289.3 159 86.2
ClCG03G002670 Citrullus lanatus HOM05D004776 ORTHO05D005777 1.8e-76 289.3 159 86.8
FAN28G2552 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.4e-76 288.9 159 86.2
PGR094G0002 Punica granatum HOM05D004776 ORTHO05D005777 2.4e-76 288.9 159 85.5
PGR094G0004 Punica granatum HOM05D004776 ORTHO05D005777 2.4e-76 288.9 159 85.5
PGR102G1642 Punica granatum HOM05D004776 ORTHO05D005777 2.4e-76 288.9 159 85.5
Gohir.D03G137500 Gossypium hirsutum HOM05D004776 ORTHO05D005777 3.1e-76 288.5 159 84.9
Gohir.D13G237900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 3.1e-76 288.5 158 86.7
Rhsim01G0212300 Rhododendron simsii HOM05D004776 ORTHO05D005777 3.1e-76 288.5 188 77.7
FAN23G0844 Fragaria x ananassa HOM05D004776 ORTHO05D005777 4.1e-76 288.1 159 86.2
FAN26G3463 Fragaria x ananassa HOM05D004776 ORTHO05D005777 4.1e-76 288.1 159 86.2
Gohir.A03G030900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 4.1e-76 288.1 159 85.5
FvH4_1g24650 Fragaria vesca HOM05D004776 ORTHO05D005777 7.0e-76 287.3 159 86.2
FAN19G0403 Fragaria x ananassa HOM05D004776 ORTHO05D005777 7.0e-76 287.3 159 86.2
MBI18_g10191_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 9.1e-76 287.0 159 83.6
MD11G1145200 Malus domestica HOM05D004776 ORTHO05D005777 9.1e-76 287.0 159 87.4
Solyc06g074960.4 Solanum lycopersicum HOM05D004776 ORTHO05D005777 9.1e-76 287.0 159 85.5
Sopen06g031360 Solanum pennellii HOM05D004776 ORTHO05D005777 9.1e-76 287.0 159 85.5
PGSC0003DMG400007163 Solanum tuberosum HOM05D004776 ORTHO05D005777 9.1e-76 287.0 159 85.5
ECA248G3913 Erigeron canadensis HOM05D004776 ORTHO05D005777 1.6e-75 286.2 159 88.1
Lalb_Chr03g0027621 Lupinus albus HOM05D004776 ORTHO05D005777 1.6e-75 286.2 159 86.2
Actinidia14011 Actinidia chinensis HOM05D004776 ORTHO05D005777 2.0e-75 285.8 153 90.2
Oeu018486.2 Olea europaea HOM05D004776 ORTHO05D005777 2.0e-75 285.8 159 86.8
PSO801G0074 Papaver somniferum HOM05D004776 ORTHO05D005777 2.0e-75 285.8 159 86.2
CAN.G1755.5 Capsicum annuum HOM05D004776 ORTHO05D005777 2.6e-75 285.4 159 85.5
MBI18_g43296_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 2.6e-75 285.4 158 84.2
Nn2g11574 Nelumbo nucifera HOM05D004776 ORTHO05D005777 2.6e-75 285.4 159 86.8
TAR623G0387 Trochodendron aralioides HOM05D004776 ORTHO05D005777 2.6e-75 285.4 159 85.5
arahy.Tifrunner.gnm1.ann1.K18VCE Arachis hypogaea HOM05D004776 ORTHO05D005777 4.5e-75 284.6 159 84.9
PSO339G3038 Papaver somniferum HOM05D004776 ORTHO05D005777 4.5e-75 284.6 159 84.9
EL10Ac9g22573 Beta vulgaris HOM05D004776 ORTHO05D005777 7.7e-75 283.9 159 86.8
arahy.Tifrunner.gnm1.ann1.MGN1WG Arachis hypogaea HOM05D004776 ORTHO05D005777 2.2e-74 282.3 159 84.3
MSTRG.17776 Avicennia marina HOM05D004776 ORTHO05D005777 2.2e-74 282.3 159 86.2
arahy.Tifrunner.gnm1.ann1.UZ8W9W Arachis hypogaea HOM05D004776 ORTHO05D005777 3.8e-74 281.6 159 83.6
Sc05g0005060 Simmondsia chinensis HOM05D004776 ORTHO05D005777 8.5e-74 280.4 159 85.5
arahy.Tifrunner.gnm1.ann1.69IQEU Arachis hypogaea HOM05D004776 ORTHO05D005777 2.5e-73 278.9 159 83.0
PSO339G3219 Papaver somniferum HOM05D004776 ORTHO05D005777 4.2e-73 278.1 158 84.8
Sabra09G0004700 Salix brachista HOM05D004776 ORTHO05D005777 1.2e-72 276.6 178 78.1
ATR1132G031 Amborella trichopoda HOM05D004776 ORTHO05D005777 1.6e-72 276.2 159 84.3
AUR62014926 Chenopodium quinoa HOM05D004776 ORTHO05D005777 1.6e-72 276.2 159 83.0
AUR62029209 Chenopodium quinoa HOM05D004776 ORTHO05D005777 1.6e-72 276.2 159 83.0
Peaxi162Scf01159g00227 Petunia axillaris HOM05D004776 ORTHO05D005777 2.7e-72 275.4 149 85.9
Nitab4.5_0006015g0020 Nicotiana tabacum HOM05D004776 ORTHO05D005777 3.6e-72 275.0 150 86.7
PSO063G2354 Papaver somniferum HOM05D004776 ORTHO05D005777 8.0e-72 273.9 157 82.8
THA.LOC104799516 Tarenaya hassleriana HOM05D004776 ORTHO05D005777 8.8e-71 270.4 163 81.0
Nitab4.5_0000106g0400 Nicotiana tabacum HOM05D004776 ORTHO05D005777 3.4e-70 268.5 154 83.1
BcaB05g23422 Brassica carinata HOM05D004776 ORTHO05D005777 4.4e-70 268.1 159 79.9
Sp5g16230 Schrenkiella parvula HOM05D004776 ORTHO05D005777 7.5e-70 267.3 159 79.2
AL5G23530 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 9.8e-70 266.9 159 79.2
BcaC09g49697 Brassica carinata HOM05D004776 ORTHO05D005777 9.8e-70 266.9 159 79.2
A01p26580 Brassica napus HOM05D004776 ORTHO05D005777 9.8e-70 266.9 159 79.2
C01p33820 Brassica napus HOM05D004776 ORTHO05D005777 9.8e-70 266.9 159 79.2
BolC1t03347H Brassica oleracea HOM05D004776 ORTHO05D005777 9.8e-70 266.9 159 79.2
BraA01t02588Z Brassica rapa HOM05D004776 ORTHO05D005777 9.8e-70 266.9 159 79.2
AT3G45040 Arabidopsis thaliana HOM05D004776 ORTHO05D005777 2.2e-69 265.8 159 78.6
A05p13030 Brassica napus HOM05D004776 ORTHO05D005777 3.7e-69 265.0 159 78.0
BraA05t20243Z Brassica rapa HOM05D004776 ORTHO05D005777 3.7e-69 265.0 159 78.0
Carub.0005s1082 Capsella rubella HOM05D004776 ORTHO05D005777 3.7e-69 265.0 159 78.6
CARHR150930 Cardamine hirsuta HOM05D004776 ORTHO05D005777 8.3e-69 263.8 159 78.0
BcaC02g11340 Brassica carinata HOM05D004776 ORTHO05D005777 1.8e-68 262.7 159 77.4
C04p17380 Brassica napus HOM05D004776 ORTHO05D005777 1.8e-68 262.7 159 77.4
BolC4t23289H Brassica oleracea HOM05D004776 ORTHO05D005777 1.8e-68 262.7 159 77.4
Oeu029897.2 Olea europaea HOM05D004776 ORTHO05D005777 1.0e-66 256.9 213 64.8
Aqoxy3G00574 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 2.2e-66 255.8 149 80.5
MELO3C035466.2 Cucumis melo HOM05D004776 ORTHO05D005777 2.2e-66 255.8 224 61.2
Manes.11G150502 Manihot esculenta HOM05D004776 ORTHO05D005777 2.9e-66 255.4 159 79.2
SEGI_33157 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 6.5e-66 254.2 159 76.7
SEGI_23621 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 4.2e-65 251.5 159 75.5
Aa31LG4G14110 Aethionema arabicum HOM05D004776 ORTHO05D005777 6.1e-64 247.7 143 83.2
AL5G23500 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 2.3e-63 245.7 159 74.2
Gohir.1Z049525 Gossypium hirsutum HOM05D004776 ORTHO05D005777 7.5e-62 240.7 143 84.6
Gohir.A13G232250 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.4e-60 236.5 143 82.5
Lj1A206T59 Lonicera japonica HOM05D004776 ORTHO05D005777 4.5e-59 231.5 129 85.3
Ca_01388_v3 Cicer arietinum L. HOM05D004776 ORTHO05D006187 8.6e-58 227.3 121 89.3
Cpa.g.sc1.25 Carica papaya HOM05D004776 ORTHO05D005777 1.1e-57 226.9 134 85.1
BcaNung05690 Brassica carinata HOM05D004776 ORTHO05D005777 4.2e-57 224.9 140 78.6
FAN27G1933 Fragaria x ananassa HOM05D004776 ORTHO05D005777 4.7e-56 221.5 128 86.7
HPP92_025805 Vanilla planifolia HOM05D004776 ORTHO05D005777 8.0e-56 220.7 121 83.5
CDE06G1539 Ceratophyllum demersum HOM05D004776 ORTHO05D005777 1.8e-55 219.5 132 81.8
Cfa010344 Carpinus fangiana HOM05D004776 ORTHO05D005777 2.3e-55 219.2 113 89.4
unitig_8.g3670 Utricularia gibba HOM05D004776 ORTHO05D005777 7.5e-54 214.2 120 85.0
Lsat_1_v5_gn_1_63021 Lactuca sativa HOM05D004776 ORTHO05D005777 3.2e-52 208.8 160 68.1
Dinv29356 Davidia involucrata HOM05D004776 ORTHO05D006187 3.6e-48 195.3 96 90.6
Thhalv10002461m.g Eutrema salsugineum HOM05D004776 ORTHO05D005777 1.3e-45 186.8 100 86.0
MD03G1126100 Malus domestica HOM05D004776 ORTHO05D005777 1.3e-45 186.8 158 62.7
Mapoly0124s0030 Marchantia polymorpha HOM05D004776 ORTHO05D005777 4.6e-43 178.3 160 58.8
Pp3c13_8200 Physcomitrium patens HOM05D004776 ORTHO05D005777 4.0e-39 165.2 160 55.6
FAN05G3839 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.9e-36 156.4 88 87.5
FAN07G0780 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.1e-33 147.1 92 79.3
Glyma.12G177300 Glycine max HOM05D004776 ORTHO05D005777 8.9e-31 137.5 78 82.1
Migut.N02573 Erythranthe guttata HOM05D004776 ORTHO05D005777 1.5e-30 136.7 70 82.9
Zm00001eb232190 Zea mays HOM05D004776 ORTHO05D005777 2.2e-29 132.9 74 77.0
MD00G1033800 Malus domestica HOM05D004776 ORTHO05D005777 1.2e-22 110.5 132 49.2
FAN10G3619 Fragaria x ananassa HOM05D004776 ORTHO05D005777 3.0e-18 95.9 52 90.4
MCO11G119 Micromonas commoda HOM05D004776 ORTHO05D005777 3.0e-18 95.9 170 38.2
Atru.chr3.3551 Acer truncatum HOM05D004776 ORTHO05D005777 4.3e-17 92.0 45 95.6
CBR_g19018 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-16 90.5 108 46.3
Cre06.g277700 Chlamydomonas reinhardtii HOM05D004776 ORTHO05D005777 5.4e-12 75.1 204 29.4
Cfa026928 Carpinus fangiana HOM05D004776 ORTHO05D005777 8.7e-10 67.8 186 28.0
COL.COLO4_21805 Corchorus olitorius HOM05D000365 ORTHO05D000154 9.0e-07 57.8 32 90.6


User provided reference genes

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