Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 2.3e-87 325.5 160 100.0
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 2.4e-68 262.3 166 78.3
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 1.7e-61 239.6 160 70.6
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 2.4e-60 235.7 174 67.2
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 2.4e-60 235.7 156 71.2
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 7.0e-60 234.2 163 71.8
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 1.2e-59 233.4 163 71.2
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 2.1e-59 232.6 157 70.7
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 2.1e-59 232.6 160 71.2
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 4.6e-59 231.5 172 66.9
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 6.0e-59 231.1 157 70.7
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 7.8e-59 230.7 164 69.5
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 3.9e-58 228.4 161 70.2
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.1e-57 226.9 157 70.7
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 1.5e-57 226.5 157 69.4
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 5.6e-57 224.6 161 67.7
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 7.3e-57 224.2 156 69.9
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 3.6e-56 221.9 163 65.6
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 6.2e-56 221.1 155 69.0
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 8.9e-55 217.2 162 66.0
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.2e-54 216.9 168 66.7
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 4.4e-54 214.9 156 67.9
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 5.8e-54 214.5 155 69.7
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 7.5e-54 214.2 155 67.1
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 9.9e-54 213.8 156 62.2
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 1.7e-53 213.0 156 62.8
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 4.9e-53 211.5 154 67.5
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 6.4e-53 211.1 154 64.9
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 1.9e-52 209.5 157 64.3
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.9e-52 209.5 155 60.6
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 7.1e-52 207.6 175 62.3
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 9.2e-52 207.2 168 63.1
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.1e-51 206.1 152 63.2
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.0e-50 203.8 153 63.4
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 1.7e-50 203.0 148 66.2
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.1e-49 200.3 172 59.3
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 2.8e-48 195.7 157 64.3
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 3.6e-48 195.3 155 60.6
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.6e-48 195.3 157 64.3
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 4.7e-48 194.9 165 58.2
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 3.1e-47 192.2 162 60.5
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 5.2e-47 191.4 201 51.7
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 1.2e-46 190.3 159 60.4
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 3.4e-46 188.7 155 59.4
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 4.4e-46 188.3 168 57.7
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 7.6e-46 187.6 159 59.1
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 1.7e-45 186.4 168 57.7
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 2.9e-45 185.7 153 60.8
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 1.4e-44 183.3 173 54.3
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.4e-44 183.3 170 57.1
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 1.2e-43 180.3 153 56.9
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 2.1e-43 179.5 172 55.2
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 2.7e-43 179.1 156 55.8
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 4.6e-43 178.3 155 59.4
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 4.6e-43 178.3 173 54.9
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 4.6e-43 178.3 171 54.4
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 3.0e-42 175.6 151 59.6
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 8.7e-42 174.1 189 50.8
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 8.7e-42 174.1 145 57.2
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 1.9e-41 172.9 125 61.6
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 1.9e-41 172.9 155 58.7
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 2.5e-41 172.6 172 52.9
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 7.3e-41 171.0 145 56.6
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 6.2e-40 167.9 160 54.4
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 6.2e-40 167.9 160 54.4
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 8.1e-40 167.5 160 54.4
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 1.8e-39 166.4 157 55.4
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 2.4e-39 166.0 152 56.6
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 3.1e-39 165.6 160 53.8
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 3.1e-39 165.6 160 53.8
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 5.3e-39 164.9 150 56.7
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.2e-38 163.7 165 50.9
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 1.5e-38 163.3 147 57.1
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 2.6e-38 162.5 150 56.0
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 2.6e-38 162.5 165 53.3
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 9.9e-38 160.6 167 52.1
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.3e-37 160.2 150 56.0
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 2.2e-37 159.5 151 53.6
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 2.9e-37 159.1 161 51.6
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 4.9e-37 158.3 158 52.5
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 3.2e-36 155.6 155 53.5
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 4.2e-36 155.2 152 53.3
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 6.0e-35 151.4 118 64.4
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 7.8e-35 151.0 154 49.4
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 3.0e-34 149.1 152 48.7
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 3.3e-33 145.6 147 49.7
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 5.6e-33 144.8 141 53.2
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 9.6e-33 144.1 152 47.4
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 2.8e-32 142.5 135 52.6
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 9.9e-30 134.0 151 46.4
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 7.1e-28 127.9 103 60.2
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 2.7e-27 125.9 150 42.0
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 1.8e-26 123.2 102 61.8
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 2.1e-24 116.3 80 73.8
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 9.9e-22 107.5 117 50.4
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 1.4e-20 103.6 97 52.6
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 3.2e-20 102.4 85 62.4
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 1.2e-19 100.5 129 39.5
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 1.8e-18 96.7 97 46.4
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 4.8e-16 88.6 77 58.4
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.0e-10 70.9 57 63.2
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 5.7e-09 65.1 49 55.1
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 6.9e-07 58.2 36 72.2


User provided reference genes

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