Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 9.0e-50 199.9 98 100.0
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 2.3e-37 158.7 98 78.6
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 3.0e-37 158.3 98 77.6
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 2.5e-36 155.2 99 71.7
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 3.3e-36 154.8 99 75.8
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 1.3e-35 152.9 96 75.0
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.7e-35 152.5 98 75.5
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 3.7e-35 151.4 99 75.8
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 3.7e-35 151.4 98 71.4
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.8e-34 149.1 97 72.2
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 2.4e-34 148.7 99 72.7
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 4.1e-34 147.9 98 70.4
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 2.0e-33 145.6 95 72.6
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 2.6e-33 145.2 98 71.4
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 5.9e-33 144.1 94 72.3
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 7.7e-33 143.7 98 69.4
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 7.7e-33 143.7 99 72.7
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 1.0e-32 143.3 91 74.7
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 1.0e-32 143.3 96 70.8
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 1.7e-32 142.5 98 66.3
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 1.7e-32 142.5 99 70.7
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.1e-31 139.8 96 66.7
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 1.1e-31 139.8 98 64.3
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 1.1e-31 139.8 96 66.7
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 4.2e-31 137.9 99 67.7
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 4.2e-31 137.9 98 70.4
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 4.2e-31 137.9 97 66.0
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 9.4e-31 136.7 98 68.4
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 1.2e-30 136.3 97 68.0
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 2.1e-30 135.6 97 62.9
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 2.1e-30 135.6 97 62.9
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 2.1e-30 135.6 97 62.9
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 2.1e-30 135.6 98 66.3
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 2.1e-30 135.6 100 67.0
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 2.7e-30 135.2 94 70.2
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 2.7e-30 135.2 102 65.7
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 3.6e-30 134.8 100 61.0
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 3.6e-30 134.8 96 65.6
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 4.7e-30 134.4 98 68.4
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 4.7e-30 134.4 91 69.2
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 4.7e-30 134.4 97 62.9
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 6.1e-30 134.0 97 72.2
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 7.9e-30 133.7 100 66.0
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 7.9e-30 133.7 95 67.4
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 7.9e-30 133.7 97 67.0
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 1.0e-29 133.3 100 62.0
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 1.0e-29 133.3 100 63.0
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 1.0e-29 133.3 97 64.9
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 1.0e-29 133.3 97 64.9
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 1.8e-29 132.5 97 60.8
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 1.8e-29 132.5 97 60.8
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 1.8e-29 132.5 102 64.7
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 3.0e-29 131.7 98 64.3
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 5.1e-29 131.0 97 61.9
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 5.1e-29 131.0 101 64.4
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 6.7e-29 130.6 95 62.1
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 6.7e-29 130.6 96 65.6
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 8.8e-29 130.2 118 57.6
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 1.1e-28 129.8 95 68.4
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 1.5e-28 129.4 91 68.1
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 2.0e-28 129.0 103 64.1
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 2.0e-28 129.0 95 61.1
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 2.6e-28 128.6 95 64.2
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 3.3e-28 128.3 90 67.8
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 3.3e-28 128.3 97 59.8
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 5.7e-28 127.5 98 61.2
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 5.7e-28 127.5 97 60.8
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 9.7e-28 126.7 97 61.9
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 1.7e-27 125.9 99 58.6
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 2.2e-27 125.6 97 57.7
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 2.2e-27 125.6 95 60.0
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 3.7e-27 124.8 97 61.9
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.4e-26 122.1 101 63.4
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 3.1e-26 121.7 95 60.0
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 3.1e-26 121.7 92 65.2
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 3.5e-25 118.2 104 59.6
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 3.5e-25 118.2 98 59.2
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 1.3e-24 116.3 95 61.1
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.7e-24 115.9 95 61.1
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 3.8e-24 114.8 94 61.7
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 3.8e-24 114.8 95 60.0
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 1.1e-23 113.2 94 61.7
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 1.5e-23 112.8 85 57.6
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 2.7e-22 108.6 98 57.1
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 1.0e-21 106.7 100 56.0
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 4.0e-21 104.8 107 54.2
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 1.2e-17 93.2 93 48.4
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 2.0e-17 92.4 93 49.5
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 2.0e-17 92.4 93 49.5
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 2.6e-17 92.0 97 55.7
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 1.7e-16 89.4 77 58.4
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 4.2e-15 84.7 96 45.8
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 3.6e-14 81.6 92 51.1
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 2.3e-13 79.0 60 60.0
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.5e-12 76.3 61 55.7
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 4.8e-11 71.2 59 61.0
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 9.1e-10 67.0 81 44.4
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 1.6e-09 66.2 82 43.9
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 3.8e-08 61.6 70 45.7
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 1.1e-07 60.1 67 38.8


User provided reference genes

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