Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 7.3e-287 989.9 530 100.0
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 3.2e-173 612.5 492 65.9
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 4.1e-173 612.1 491 68.6
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 5.6e-170 601.7 495 67.7
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 1.4e-168 597.0 494 64.0
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 1.5e-167 593.6 491 64.0
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 9.8e-167 590.9 491 63.3
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 1.9e-165 586.6 491 65.4
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 3.2e-165 585.9 493 66.5
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 5.4e-165 585.1 503 63.2
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.6e-161 573.5 494 64.6
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 3.1e-160 569.3 491 63.3
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 6.8e-160 568.2 491 62.5
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 6.8e-160 568.2 491 62.5
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 2.0e-159 566.6 489 61.6
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 9.8e-159 564.3 493 62.1
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 8.3e-158 561.2 491 60.7
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 8.3e-158 561.2 502 62.0
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 8.3e-158 561.2 494 63.2
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 2.1e-156 556.6 492 64.0
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 2.7e-156 556.2 498 60.2
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 7.8e-156 554.7 497 61.0
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 1.7e-155 553.5 494 59.7
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 3.6e-153 545.8 494 60.3
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 1.1e-152 544.3 499 61.5
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 5.2e-152 542.0 507 60.2
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 9.9e-151 537.7 494 60.3
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 2.2e-150 536.6 494 59.5
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 1.4e-149 533.9 494 60.1
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 3.2e-149 532.7 491 62.9
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 5.4e-149 531.9 492 59.8
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 9.2e-149 531.2 472 59.1
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 9.2e-149 531.2 472 58.7
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 1.2e-148 530.8 501 59.1
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 1.6e-148 530.4 493 58.6
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 1.3e-147 527.3 499 57.3
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 3.9e-147 525.8 493 57.2
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 1.5e-143 513.8 477 60.2
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 5.8e-143 511.9 490 57.8
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 5.8e-143 511.9 498 58.0
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 7.6e-143 511.5 490 60.0
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 1.3e-142 510.8 407 66.1
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 2.2e-142 510.0 496 59.3
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 2.2e-142 510.0 489 57.5
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 3.8e-142 509.2 487 58.5
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 1.9e-141 506.9 479 60.5
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 1.9e-141 506.9 500 58.4
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 2.4e-141 506.5 498 58.4
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 4.2e-141 505.8 485 56.5
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 5.4e-141 505.4 408 67.9
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 5.4e-141 505.4 408 67.9
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 3.9e-139 499.2 501 56.1
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 3.3e-138 496.1 497 57.3
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 5.6e-138 495.4 464 60.8
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 9.6e-138 494.6 497 56.9
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 1.3e-137 494.2 518 53.5
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 2.1e-137 493.4 496 57.1
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 9.0e-136 488.0 495 55.6
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 3.8e-134 482.6 475 57.5
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 2.4e-133 479.9 517 54.0
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 3.2e-133 479.6 481 57.8
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 7.1e-133 478.4 501 56.7
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 1.6e-132 477.2 499 56.9
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 1.6e-132 477.2 499 54.3
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 2.1e-132 476.9 297 72.7
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 2.1e-132 476.9 494 56.3
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 2.7e-132 476.5 510 56.5
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.7e-132 476.5 492 56.5
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 2.7e-132 476.5 496 55.0
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 3.9e-131 472.6 496 55.8
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 3.3e-130 469.5 568 52.6
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 3.3e-130 469.5 508 54.1
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 9.6e-130 468.0 495 58.2
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 9.6e-130 468.0 492 53.3
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 1.6e-129 467.2 502 56.4
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 1.1e-128 464.5 570 49.5
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 1.4e-128 464.2 527 53.9
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 1.8e-128 463.8 267 75.3
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 2.4e-128 463.4 493 56.8
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 6.9e-128 461.8 491 57.8
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 1.5e-127 460.7 499 56.9
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 2.0e-127 460.3 438 59.1
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 1.6e-124 450.7 508 51.8
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 7.9e-124 448.4 434 58.1
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 1.9e-122 443.7 491 53.4
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 4.3e-122 442.6 495 52.1
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 2.8e-121 439.9 482 52.5
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 5.5e-117 425.6 476 52.7
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 1.1e-114 417.9 475 52.2
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 1.3e-113 414.5 527 47.8
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 3.3e-106 389.8 481 47.0
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.9e-101 374.0 458 51.5
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 3.3e-98 363.2 211 75.8
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 3.0e-91 340.1 407 53.3
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 2.0e-90 337.4 500 44.4
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 4.0e-83 313.2 482 43.2
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.2e-78 297.4 308 51.6
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 2.9e-78 297.0 357 47.3
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 1.7e-73 281.2 227 58.1
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 4.8e-73 279.6 229 57.6
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.0e-67 261.9 146 78.1
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 3.4e-66 256.9 334 51.8
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 8.1e-28 129.4 68 82.4
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 1.1e-27 129.0 72 79.2
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 5.8e-26 123.2 184 39.7
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 1.4e-19 102.1 225 43.6
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 1.3e-17 95.5 75 60.0
Potri.004G188432 Populus trichocarpa HOM05D007000 ORTHO05D030830 1.1e-16 92.4 102 54.9
HPP92_011512 Vanilla planifolia HOM05D007000 ORTHO05D428354 9.6e-13 79.3 251 33.1


User provided reference genes

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