Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.33 Acer truncatum HOM05D004986 ORTHO05D005898 3.1e-86 321.6 148 100.0
Atru.chr3.37 Acer truncatum HOM05D004986 ORTHO05D005898 1.8e-54 216.1 103 98.1
Atru.chr10.1816 Acer truncatum HOM05D004986 ORTHO05D005898 5.3e-54 214.5 110 89.1
Atru.chr10.1831 Acer truncatum HOM05D004986 ORTHO05D005898 1.3e-52 209.9 111 88.3
Haze_03636 Corylus avellana HOM05D004986 ORTHO05D005898 9.8e-48 193.7 110 80.0
arahy.Tifrunner.gnm1.ann1.UZ6AL0 Arachis hypogaea HOM05D004986 ORTHO05D005898 1.4e-46 189.9 112 77.7
Prupe.7G185600 Prunus persica HOM05D004986 ORTHO05D005898 1.8e-46 189.5 110 78.2
Cfa007104 Carpinus fangiana HOM05D004986 ORTHO05D005898 3.1e-46 188.7 110 78.2
arahy.Tifrunner.gnm1.ann1.H550X0 Arachis hypogaea HOM05D004986 ORTHO05D005898 4.5e-45 184.9 121 71.9
FvH4_1g10130 Fragaria vesca HOM05D004986 ORTHO05D005898 4.5e-45 184.9 110 76.4
FAN23G1121 Fragaria x ananassa HOM05D004986 ORTHO05D005898 4.5e-45 184.9 110 76.4
Ciclev10025602m.g Citrus clementina HOM05D004986 ORTHO05D005898 7.7e-45 184.1 113 77.0
Dinv28304 Davidia involucrata HOM05D004986 ORTHO05D005898 2.3e-44 182.6 110 74.5
FAN19G1207 Fragaria x ananassa HOM05D004986 ORTHO05D005898 6.5e-44 181.0 110 75.5
QL11p035166 Quercus lobata HOM05D004986 ORTHO05D005898 1.1e-43 180.3 111 76.6
MSTRG.17107 Avicennia marina HOM05D004986 ORTHO05D005898 1.9e-43 179.5 110 71.8
FAN23G2177 Fragaria x ananassa HOM05D004986 ORTHO05D005898 2.5e-43 179.1 110 74.5
FAN26G2552 Fragaria x ananassa HOM05D004986 ORTHO05D005898 3.3e-43 178.7 110 73.6
FAN28G2129 Fragaria x ananassa HOM05D004986 ORTHO05D005898 3.3e-43 178.7 110 73.6
MD02G1113000 Malus domestica HOM05D004986 ORTHO05D005898 3.3e-43 178.7 118 66.1
Lj3g0020964 Lotus japonicus HOM05D004986 ORTHO05D005898 4.2e-43 178.3 110 71.8
Glyma.16G112300 Glycine max HOM05D004986 ORTHO05D005898 7.2e-43 177.6 121 68.6
Thecc.01G002600 Theobroma cacao HOM05D004986 ORTHO05D005898 7.2e-43 177.6 110 72.7
Manes.01G157000 Manihot esculenta HOM05D004986 ORTHO05D005898 9.5e-43 177.2 110 73.6
Medtr8g073110 Medicago truncatula HOM05D004986 ORTHO05D005898 9.5e-43 177.2 110 70.9
RcHm_v2.0_Chr2g0096901 Rosa chinensis HOM05D004986 ORTHO05D005898 9.5e-43 177.2 110 72.7
Manes.02G115500 Manihot esculenta HOM05D004986 ORTHO05D005898 2.1e-42 176.0 110 73.6
PGR119G1257 Punica granatum HOM05D004986 ORTHO05D005898 2.1e-42 176.0 111 73.0
Ca_02840_v3 Cicer arietinum L. HOM05D004986 ORTHO05D005898 2.8e-42 175.6 110 70.0
Glyma.09G196600 Glycine max HOM05D004986 ORTHO05D005898 3.6e-42 175.3 121 67.8
Oeu002901.1 Olea europaea HOM05D004986 ORTHO05D005898 3.6e-42 175.3 113 71.7
Phvul.010G020700 Phaseolus vulgaris HOM05D004986 ORTHO05D005898 4.7e-42 174.9 121 68.6
Cpa.g.sc91.49 Carica papaya HOM05D004986 ORTHO05D005898 6.1e-42 174.5 110 70.0
Cc07_g12070 Coffea canephora HOM05D004986 ORTHO05D005898 1.0e-41 173.7 110 70.0
PSO170G5246 Papaver somniferum HOM05D004986 ORTHO05D005898 1.0e-41 173.7 110 71.8
VMungo0331G1669 Vigna mungo HOM05D004986 ORTHO05D005898 1.4e-41 173.3 131 64.1
Sed0027663 Sechium edule HOM05D004986 ORTHO05D005898 1.8e-41 172.9 114 71.1
Psat4g105800 Pisum sativum HOM05D004986 ORTHO05D005898 3.0e-41 172.2 110 70.9
Aqoxy6G01559 Aquilegia oxysepala HOM05D004986 ORTHO05D005898 1.2e-40 170.2 118 66.1
MBI13_g20494_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 1.2e-40 170.2 114 66.7
Actinidia32993 Actinidia chinensis HOM05D004986 ORTHO05D005898 1.5e-40 169.9 111 72.1
SalBow5G3763 Salvia bowleyana HOM05D004986 ORTHO05D005898 1.5e-40 169.9 110 69.1
CiPaw.07G000800 Carya illinoinensis HOM05D004986 ORTHO05D005898 2.0e-40 169.5 110 71.8
MD15G1228500 Malus domestica HOM05D004986 ORTHO05D005898 2.0e-40 169.5 110 68.2
Psat0s3210g0040 Pisum sativum HOM05D004986 ORTHO05D005898 2.0e-40 169.5 110 70.0
TAR628G0962 Trochodendron aralioides HOM05D004986 ORTHO05D005898 2.6e-40 169.1 110 70.9
Hma1.2p1_0085F.1_g044450 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 4.4e-40 168.3 110 70.0
Hma1.2p1_0085F.1_g044460 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 4.4e-40 168.3 110 70.0
Sc05g0009010 Simmondsia chinensis HOM05D004986 ORTHO05D005898 4.4e-40 168.3 117 65.0
Migut.B01487 Erythranthe guttata HOM05D004986 ORTHO05D005898 5.7e-40 167.9 110 68.2
CANSAT21G0416 Cannabis sativa HOM05D004986 ORTHO05D005898 7.5e-40 167.5 112 72.3
Lalb_Chr05g0214931 Lupinus albus HOM05D004986 ORTHO05D005898 9.8e-40 167.2 110 69.1
vmacro20612 Vaccinium macrocarpon HOM05D004986 ORTHO05D005898 9.8e-40 167.2 113 69.0
GSVIVG01022308001 Vitis vinifera HOM05D004986 ORTHO05D005898 9.8e-40 167.2 110 68.2
MD02G1112100 Malus domestica HOM05D004986 ORTHO05D005898 1.7e-39 166.4 110 65.5
Rhsim10G0191900 Rhododendron simsii HOM05D004986 ORTHO05D005898 1.7e-39 166.4 110 70.0
CSS0007723 Camellia sinensis var. sinensis HOM05D004986 ORTHO05D005898 2.8e-39 165.6 110 70.9
Gohir.D03G000700 Gossypium hirsutum HOM05D004986 ORTHO05D005898 2.8e-39 165.6 111 66.7
Nn5g31026 Nelumbo nucifera HOM05D004986 ORTHO05D005898 3.7e-39 165.2 110 68.2
CsaV3_4G027660 Cucumis sativus L. HOM05D004986 ORTHO05D005898 6.3e-39 164.5 114 65.8
MELO3C026343.2 Cucumis melo HOM05D004986 ORTHO05D005898 8.3e-39 164.1 114 65.8
Lj2C503G0 Lonicera japonica HOM05D004986 ORTHO05D005898 8.3e-39 164.1 114 66.7
DCAR_024399 Daucus carota HOM05D004986 ORTHO05D005898 1.1e-38 163.7 110 70.0
Gohir.A02G179000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 1.1e-38 163.7 111 66.7
Hund21384 Selenicereus undatus HOM05D004986 ORTHO05D005898 2.4e-38 162.5 108 66.7
Actinidia22885 Actinidia chinensis HOM05D004986 ORTHO05D005898 3.1e-38 162.2 110 70.0
Nitab4.5_0004269g0070 Nicotiana tabacum HOM05D004986 ORTHO05D005898 4.1e-38 161.8 110 68.2
ClCG04G005010 Citrullus lanatus HOM05D004986 ORTHO05D005898 5.4e-38 161.4 114 64.9
Eucgr.I02210 Eucalyptus grandis HOM05D004986 ORTHO05D005898 5.4e-38 161.4 108 65.7
Gorai.003G001100 Gossypium raimondii HOM05D004986 ORTHO05D005898 7.0e-38 161.0 111 65.8
TAR381G0383 Trochodendron aralioides HOM05D004986 ORTHO05D005898 1.2e-37 160.2 110 66.4
Duzib106G1274 Durio zibethinus HOM05D004986 ORTHO05D005898 2.7e-37 159.1 110 65.5
AUR62006055 Chenopodium quinoa HOM05D004986 ORTHO05D005898 3.5e-37 158.7 113 62.8
Potri.002G177100 Populus trichocarpa HOM05D004986 ORTHO05D005898 7.8e-37 157.5 113 67.3
Sabra02G0136200 Salix brachista HOM05D004986 ORTHO05D005898 7.8e-37 157.5 113 67.3
SGA_v2.0_scaffold52G19267 Striga asiatica HOM05D004986 ORTHO05D005898 7.8e-37 157.5 110 64.5
AUR62035574 Chenopodium quinoa HOM05D004986 ORTHO05D005898 1.0e-36 157.1 112 63.4
Nitab4.5_0000495g0010 Nicotiana tabacum HOM05D004986 ORTHO05D005898 1.3e-36 156.8 110 66.4
Gohir.A02G055800 Gossypium hirsutum HOM05D004986 ORTHO05D005898 2.9e-36 155.6 110 63.6
CAN.G647.4 Capsicum annuum HOM05D004986 ORTHO05D005898 3.8e-36 155.2 118 64.4
TWI53G0851 Tripterygium wilfordii HOM05D004986 ORTHO05D005898 5.0e-36 154.8 113 63.7
AT5G65960 Arabidopsis thaliana HOM05D004986 ORTHO05D005898 8.6e-36 154.1 110 63.6
SGA_v2.0_scaffold34G13577 Striga asiatica HOM05D004986 ORTHO05D005898 1.5e-35 153.3 110 61.8
Gorai.005G068600 Gossypium raimondii HOM05D004986 ORTHO05D005898 1.9e-35 152.9 110 62.7
Peaxi162Scf00920g00114 Petunia axillaris HOM05D004986 ORTHO05D005898 2.5e-35 152.5 110 63.6
Gohir.D02G061000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 3.3e-35 152.1 110 62.7
Ah.10g026930 Amaranthus hybridus HOM05D004986 ORTHO05D005898 5.6e-35 151.4 113 59.3
PGSC0003DMG400018667 Solanum tuberosum HOM05D004986 ORTHO05D005898 5.6e-35 151.4 110 64.5
EL10Ac3g05234 Beta vulgaris HOM05D004986 ORTHO05D005898 7.3e-35 151.0 110 63.6
Carub.0008s2856 Capsella rubella HOM05D004986 ORTHO05D005898 7.3e-35 151.0 110 62.7
Solyc03g032050.4 Solanum lycopersicum HOM05D004986 ORTHO05D005898 1.2e-34 150.2 113 62.8
AL8G45680 Arabidopsis lyrata HOM05D004986 ORTHO05D005898 2.8e-34 149.1 110 61.8
Sopen03g005900 Solanum pennellii HOM05D004986 ORTHO05D005898 2.8e-34 149.1 110 63.6
Sp2g30730 Schrenkiella parvula HOM05D004986 ORTHO05D005898 6.1e-34 147.9 110 60.9
Zm00001eb072790 Zea mays HOM05D004986 ORTHO05D005898 8.0e-34 147.5 108 60.2
ATR0807G113 Amborella trichopoda HOM05D004986 ORTHO05D005898 1.8e-33 146.4 117 57.3
Aa31LG1G14460 Aethionema arabicum HOM05D004986 ORTHO05D005898 3.0e-33 145.6 113 57.5
ECA240G4103 Erigeron canadensis HOM05D004986 ORTHO05D005898 4.0e-33 145.2 112 63.4
HanXRQChr10g0316221 Helianthus annuus HOM05D004986 ORTHO05D005898 4.0e-33 145.2 111 62.2
COL.COLO4_34271 Corchorus olitorius HOM05D004986 ORTHO05D005898 5.2e-33 144.8 92 68.5
Thhalv10004346m.g Eutrema salsugineum HOM05D004986 ORTHO05D005898 3.4e-32 142.1 111 60.4
THA.LOC104826450 Tarenaya hassleriana HOM05D004986 ORTHO05D005898 7.5e-32 141.0 118 57.6
A09p10240 Brassica napus HOM05D004986 ORTHO05D005898 1.3e-31 140.2 112 61.6
BraA09t36669Z Brassica rapa HOM05D004986 ORTHO05D005898 1.3e-31 140.2 112 61.6
HPP92_007280 Vanilla planifolia HOM05D004986 ORTHO05D005898 1.3e-31 140.2 104 60.6
BcaC04g23101 Brassica carinata HOM05D004986 ORTHO05D005898 3.7e-31 138.7 111 60.4
C09p12150 Brassica napus HOM05D004986 ORTHO05D005898 3.7e-31 138.7 111 60.4
BolC9t54105H Brassica oleracea HOM05D004986 ORTHO05D005898 3.7e-31 138.7 111 60.4
Os04g0584800 Oryza sativa ssp. japonica HOM05D004986 ORTHO05D005898 8.3e-31 137.5 104 57.7
SEGI_13138 Sequoiadendron giganteum HOM05D004986 ORTHO05D005898 1.1e-30 137.1 109 56.9
CARHR281810 Cardamine hirsuta HOM05D004986 ORTHO05D005898 1.9e-30 136.3 113 57.5
CARHR257450 Cardamine hirsuta HOM05D004986 ORTHO05D005898 1.6e-29 133.3 109 59.6
Lsat_1_v5_gn_2_73561 Lactuca sativa HOM05D004986 ORTHO05D005898 1.6e-29 133.3 111 58.6
unitig_26.g8860 Utricularia gibba HOM05D004986 ORTHO05D005898 2.0e-29 132.9 114 55.3
Potri.007G064500 Populus trichocarpa HOM05D004986 ORTHO05D005898 6.6e-28 127.9 112 56.2
CDE07G1230 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 8.6e-28 127.5 118 50.8
BcaB04g20132 Brassica carinata HOM05D004986 ORTHO05D005898 1.5e-27 126.7 116 55.2
AagrBONN_evm.TU.Sc2ySwM_362.836 Anthoceros agrestis HOM05D004986 ORTHO05D005898 3.3e-27 125.6 110 53.6
Mapoly0024s0125 Marchantia polymorpha HOM05D004986 ORTHO05D005898 3.3e-27 125.6 113 52.2
SMO147G0325 Selaginella moellendorffii HOM05D004986 ORTHO05D005898 8.9e-25 117.5 113 53.1
Pp3c17_5460 Physcomitrium patens HOM05D004986 ORTHO05D005898 1.7e-23 113.2 123 46.3
MD02G1109300 Malus domestica HOM05D004986 ORTHO05D005898 1.4e-22 110.2 79 64.6
Lj4g0017944 Lotus japonicus HOM05D004986 ORTHO05D005898 7.0e-22 107.8 109 48.6
Oeu037412.2 Olea europaea HOM05D004986 ORTHO05D005898 7.8e-21 104.4 89 61.8
Dinv40206 Davidia involucrata HOM05D004986 ORTHO05D005898 1.0e-20 104.0 50 90.0
MBI15_g18235_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 2.5e-19 99.4 91 54.9
HanXRQChr13g0388301 Helianthus annuus HOM05D004986 ORTHO05D005898 7.3e-19 97.8 93 53.8
Sed0024004 Sechium edule HOM05D004986 ORTHO05D005898 1.4e-17 93.6 99 48.5
MD02G1112600 Malus domestica HOM05D004986 ORTHO05D005898 1.9e-14 83.2 60 60.0
CDE04G0629 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 2.3e-12 76.3 57 59.6
CBR_g24177 Chara braunii HOM05D004986 ORTHO05D005898 1.2e-08 63.9 129 34.1


User provided reference genes

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