Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 4.0e-69 264.6 131 100.0
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 4.3e-63 244.6 128 93.8
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 5.6e-63 244.2 131 92.4
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 5.6e-63 244.2 129 91.5
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 6.2e-62 240.7 128 91.4
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 1.8e-61 239.2 128 92.2
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 3.1e-61 238.4 128 90.6
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 5.2e-61 237.7 128 89.1
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 5.2e-61 237.7 128 89.1
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 8.9e-61 236.9 130 88.5
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 8.9e-61 236.9 128 91.4
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.2e-60 236.5 128 88.3
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 1.5e-60 236.1 128 89.1
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 1.5e-60 236.1 128 90.6
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 5.8e-60 234.2 128 89.1
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 5.8e-60 234.2 128 89.8
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 5.8e-60 234.2 128 88.3
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.3e-59 233.0 128 89.1
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.3e-59 233.0 130 89.2
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 1.3e-59 233.0 128 89.1
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.7e-59 232.6 130 89.2
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 1.7e-59 232.6 125 89.6
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 2.2e-59 232.3 128 88.3
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 2.2e-59 232.3 128 89.1
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 4.9e-59 231.1 128 86.7
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 6.4e-59 230.7 130 88.5
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 6.4e-59 230.7 128 89.8
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 8.3e-59 230.3 128 87.5
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 8.3e-59 230.3 128 88.3
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 1.4e-58 229.6 128 87.5
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.4e-58 229.6 130 88.5
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 2.4e-58 228.8 128 86.7
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 2.4e-58 228.8 128 86.7
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 3.2e-58 228.4 130 84.6
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 4.1e-58 228.0 128 89.1
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 4.1e-58 228.0 128 89.1
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 4.1e-58 228.0 128 85.2
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 5.4e-58 227.6 128 85.9
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 5.4e-58 227.6 128 85.9
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 5.4e-58 227.6 128 85.2
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 9.2e-58 226.9 128 85.9
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 1.2e-57 226.5 128 89.1
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 1.2e-57 226.5 128 89.1
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 2.1e-57 225.7 130 83.8
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 2.1e-57 225.7 128 85.9
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 2.7e-57 225.3 128 84.4
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 2.7e-57 225.3 128 87.5
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 3.5e-57 224.9 128 86.7
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 3.5e-57 224.9 128 84.4
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 4.6e-57 224.6 128 84.4
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 6.0e-57 224.2 128 88.3
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 7.8e-57 223.8 128 84.4
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 1.3e-56 223.0 128 84.4
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 1.3e-56 223.0 128 85.2
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.7e-56 222.6 130 80.8
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 1.7e-56 222.6 128 86.7
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 1.7e-56 222.6 128 86.7
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.7e-56 222.6 128 88.3
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 2.3e-56 222.2 128 87.5
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 2.3e-56 222.2 128 87.5
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 2.3e-56 222.2 128 87.5
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 2.3e-56 222.2 128 86.7
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 3.9e-56 221.5 128 87.5
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 5.1e-56 221.1 128 84.4
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 5.1e-56 221.1 128 82.8
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 6.6e-56 220.7 128 84.4
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 8.6e-56 220.3 128 83.6
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 8.6e-56 220.3 128 83.6
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 8.6e-56 220.3 128 83.6
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 8.6e-56 220.3 128 83.6
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 8.6e-56 220.3 128 87.5
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 8.6e-56 220.3 128 86.7
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 1.1e-55 219.9 128 83.6
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 1.1e-55 219.9 128 85.2
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 1.1e-55 219.9 128 86.7
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.9e-55 219.2 125 84.8
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 2.5e-55 218.8 128 82.8
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 2.5e-55 218.8 128 82.0
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 3.3e-55 218.4 125 84.0
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 3.3e-55 218.4 128 83.6
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 4.3e-55 218.0 128 82.8
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 4.3e-55 218.0 128 82.0
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 5.6e-55 217.6 128 82.8
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 5.6e-55 217.6 128 85.9
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.2e-54 216.5 128 83.6
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 3.6e-54 214.9 130 83.8
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 4.7e-54 214.5 129 82.2
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 6.2e-54 214.2 128 82.8
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.4e-53 213.0 128 78.1
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 4.0e-53 211.5 128 79.7
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 5.8e-52 207.6 128 80.5
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 7.1e-50 200.7 128 81.2
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 2.7e-49 198.7 128 78.1
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 1.3e-48 196.4 128 75.0
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 4.7e-46 188.0 130 71.5
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 4.7e-46 188.0 130 71.5
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.8e-45 186.0 128 72.7
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 2.4e-45 185.7 132 73.5
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 7.6e-44 180.6 102 84.3
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.9e-39 166.0 84 92.9
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 7.6e-28 127.5 111 53.2
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 5.5e-26 121.3 67 88.1
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 8.7e-24 114.0 62 83.9
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.5e-23 113.2 72 76.4
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 5.6e-23 111.3 66 83.3
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.8e-22 108.2 66 80.3
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.4e-21 105.9 60 83.3
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.5e-20 101.7 64 81.2
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 8.4e-19 97.4 53 88.7
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 1.9e-15 86.3 50 86.0
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 3.8e-11 72.0 50 74.0
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 1.9e-10 69.7 51 72.5
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 4.2e-10 68.6 38 76.3
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 7.9e-09 64.3 127 34.6
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 9.7e-07 57.4 90 35.6


User provided reference genes

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