Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3271 Acer truncatum HOM05D001468 ORTHO05D001404 7.5e-58 226.9 107 100.0
Cpa.g.sc32.9 Carica papaya HOM05D001468 ORTHO05D001404 1.0e-14 83.6 51 80.4
Sabra04G0137500 Salix brachista HOM05D001468 ORTHO05D001404 5.1e-14 81.3 79 55.7
Manes.11G161400 Manihot esculenta HOM05D001468 ORTHO05D001404 8.7e-14 80.5 51 76.5
QL01p012370 Quercus lobata HOM05D001468 ORTHO05D001404 8.7e-14 80.5 62 64.5
Cfa010019 Carpinus fangiana HOM05D001468 ORTHO05D001404 1.1e-13 80.1 62 64.5
Haze_23380 Corylus avellana HOM05D001468 ORTHO05D001404 1.9e-13 79.3 51 76.5
Prupe.6G129000 Prunus persica HOM05D001468 ORTHO05D001404 1.9e-13 79.3 68 60.3
Gohir.A08G004900 Gossypium hirsutum HOM05D001468 ORTHO05D001404 2.5e-13 79.0 95 53.7
Gohir.D08G015200 Gossypium hirsutum HOM05D001468 ORTHO05D001404 2.5e-13 79.0 95 53.7
Gorai.004G009700 Gossypium raimondii HOM05D001468 ORTHO05D001404 2.5e-13 79.0 95 53.7
GSVIVG01036136001 Vitis vinifera HOM05D001468 ORTHO05D001404 2.5e-13 79.0 68 60.3
Ciclev10027692m.g Citrus clementina HOM05D001468 ORTHO05D001404 3.3e-13 78.6 51 76.5
Potri.004G203500 Populus trichocarpa HOM05D001468 ORTHO05D001404 3.3e-13 78.6 54 72.2
TWI31G0247 Tripterygium wilfordii HOM05D001468 ORTHO05D001404 3.3e-13 78.6 62 62.9
Duzib170G0349 Durio zibethinus HOM05D001468 ORTHO05D001404 5.6e-13 77.8 55 76.4
Dinv42560 Davidia involucrata HOM05D001468 ORTHO05D001404 9.6e-13 77.0 51 74.5
C09p54140 Brassica napus HOM05D001468 ORTHO05D001404 1.3e-12 76.6 76 55.3
BolC9t58285H Brassica oleracea HOM05D001468 ORTHO05D001404 1.3e-12 76.6 76 55.3
BcaC04g19574 Brassica carinata HOM05D001468 ORTHO05D001404 1.6e-12 76.3 76 55.3
MD03G1143400 Malus domestica HOM05D001468 ORTHO05D001404 2.1e-12 75.9 62 59.7
CiPaw.14G100500 Carya illinoinensis HOM05D001468 ORTHO05D001404 2.8e-12 75.5 62 61.3
Dinv29475 Davidia involucrata HOM05D001468 ORTHO05D001404 2.8e-12 75.5 50 74.0
Potri.009G164400 Populus trichocarpa HOM05D001468 ORTHO05D001404 2.8e-12 75.5 54 66.7
BcaB08g36430 Brassica carinata HOM05D001468 ORTHO05D001404 3.7e-12 75.1 82 51.2
Thhalv10012493m.g Eutrema salsugineum HOM05D001468 ORTHO05D001404 3.7e-12 75.1 51 72.5
THA.LOC104810917 Tarenaya hassleriana HOM05D001468 ORTHO05D001404 3.7e-12 75.1 79 51.9
TWI79G0678 Tripterygium wilfordii HOM05D001468 ORTHO05D001404 3.7e-12 75.1 76 52.6
TWI79G1571 Tripterygium wilfordii HOM05D001468 ORTHO05D001404 3.7e-12 75.1 76 52.6
A10p18380 Brassica napus HOM05D001468 ORTHO05D001404 4.8e-12 74.7 76 53.9
BraA10t43919Z Brassica rapa HOM05D001468 ORTHO05D001404 4.8e-12 74.7 76 53.9
Carub.0006s2019 Capsella rubella HOM05D001468 ORTHO05D001404 8.2e-12 73.9 68 58.8
Thecc.09G284600 Theobroma cacao HOM05D001468 ORTHO05D001404 8.2e-12 73.9 52 75.0
Thecc.09G284700 Theobroma cacao HOM05D001468 ORTHO05D001404 8.2e-12 73.9 52 75.0
MD11G1164200 Malus domestica HOM05D001468 ORTHO05D001404 1.1e-11 73.6 62 59.7
AL6G33470 Arabidopsis lyrata HOM05D001468 ORTHO05D001404 1.8e-11 72.8 67 56.7
AT5G22450 Arabidopsis thaliana HOM05D001468 ORTHO05D001404 1.8e-11 72.8 51 70.6
Gohir.A09G095266 Gossypium hirsutum HOM05D001468 ORTHO05D001404 2.4e-11 72.4 52 75.0
COL.COLO4_19888 Corchorus olitorius HOM05D001468 ORTHO05D001404 3.1e-11 72.0 52 71.2
Gohir.D09G095000 Gossypium hirsutum HOM05D001468 ORTHO05D001404 3.1e-11 72.0 52 73.1
Gorai.006G111700 Gossypium raimondii HOM05D001468 ORTHO05D001404 3.1e-11 72.0 52 73.1
Sp6g22800 Schrenkiella parvula HOM05D001468 ORTHO05D001404 3.1e-11 72.0 51 68.6
Sabra09G0128600 Salix brachista HOM05D001468 ORTHO05D001404 4.0e-11 71.6 68 57.4
CARHR191080 Cardamine hirsuta HOM05D001468 ORTHO05D001404 5.3e-11 71.2 51 68.6
Duzib168G1834 Durio zibethinus HOM05D001468 ORTHO05D001404 5.3e-11 71.2 52 73.1
FvH4_3g24820 Fragaria vesca HOM05D001468 ORTHO05D001404 6.9e-11 70.9 60 60.0
FAN11G3006 Fragaria x ananassa HOM05D001468 ORTHO05D001404 6.9e-11 70.9 60 60.0
FAN16G3735 Fragaria x ananassa HOM05D001468 ORTHO05D001404 6.9e-11 70.9 60 60.0
FAN21G0439 Fragaria x ananassa HOM05D001468 ORTHO05D001404 6.9e-11 70.9 60 60.0
RcHm_v2.0_Chr5g0044401 Rosa chinensis HOM05D001468 ORTHO05D001404 6.9e-11 70.9 54 64.8
FAN25G0444 Fragaria x ananassa HOM05D001468 ORTHO05D001404 1.2e-10 70.1 60 60.0
FAN25G2902 Fragaria x ananassa HOM05D001468 ORTHO05D001404 1.2e-10 70.1 60 60.0
Lalb_Chr03g0028061 Lupinus albus HOM05D001468 ORTHO05D001404 1.2e-10 70.1 51 66.7
Lalb_Chr03g0028071 Lupinus albus HOM05D001468 ORTHO05D001404 1.2e-10 70.1 51 66.7
Aa31LG1G13070 Aethionema arabicum HOM05D001468 ORTHO05D001404 2.0e-10 69.3 65 56.9
BcaB01g04709 Brassica carinata HOM05D001468 ORTHO05D001404 4.5e-10 68.2 53 73.6
Manes.04G061300 Manihot esculenta HOM05D001468 ORTHO05D001404 1.0e-09 67.0 69 50.7
Sc21g0007110 Simmondsia chinensis HOM05D001468 ORTHO05D001404 1.3e-09 66.6 55 60.0
BraA03t10386Z Brassica rapa HOM05D001468 ORTHO05D001404 2.9e-09 65.5 52 69.2
arahy.Tifrunner.gnm1.ann1.D0TANL Arachis hypogaea HOM05D001468 ORTHO05D001404 3.8e-09 65.1 76 48.7
arahy.Tifrunner.gnm1.ann1.WV99JK Arachis hypogaea HOM05D001468 ORTHO05D001404 3.8e-09 65.1 76 48.7
Lalb_Chr01g0004831 Lupinus albus HOM05D001468 ORTHO05D001404 3.8e-09 65.1 62 54.8
Hma1.2p1_0578F.1_g182440 Hydrangea macrophylla HOM05D001468 ORTHO05D001404 4.9e-09 64.7 50 66.0
GSVIVG01001003001 Vitis vinifera HOM05D001468 ORTHO05D001404 6.5e-09 64.3 62 50.0
BcaC01g06581 Brassica carinata HOM05D001468 ORTHO05D001404 1.9e-08 62.8 52 67.3
C03p12360 Brassica napus HOM05D001468 ORTHO05D001404 1.9e-08 62.8 52 67.3
BolC3t13708H Brassica oleracea HOM05D001468 ORTHO05D001404 1.9e-08 62.8 52 67.3
Glyma.12G088600 Glycine max HOM05D001468 ORTHO05D001404 4.2e-08 61.6 51 60.8
Hma1.2p1_0709F.1_g207170 Hydrangea macrophylla HOM05D001468 ORTHO05D001404 4.2e-08 61.6 44 61.4
Glyma.11G183800 Glycine max HOM05D001468 ORTHO05D001404 5.5e-08 61.2 51 60.8
Atru.chr12.1021 Acer truncatum HOM05D001468 ORTHO05D001404 7.1e-08 60.8 51 52.9
CSS0031265 Camellia sinensis var. sinensis HOM05D001468 ORTHO05D001404 1.2e-07 60.1 61 49.2
CSS0043968 Camellia sinensis var. sinensis HOM05D001468 ORTHO05D001404 1.2e-07 60.1 61 49.2
Dinv11840 Davidia involucrata HOM05D001468 ORTHO05D001404 1.2e-07 60.1 44 63.6
TAR623G0506 Trochodendron aralioides HOM05D001468 ORTHO05D001404 1.2e-07 60.1 88 40.9
TAR633G0498 Trochodendron aralioides HOM05D001468 ORTHO05D001404 1.2e-07 60.1 47 66.0
ClCG01G012310 Citrullus lanatus HOM05D001468 ORTHO05D001404 1.6e-07 59.7 51 56.9
MELO3C004729.2 Cucumis melo HOM05D001468 ORTHO05D001404 1.6e-07 59.7 51 56.9
CsaV3_1G014760 Cucumis sativus L. HOM05D001468 ORTHO05D001404 1.6e-07 59.7 51 56.9
Hund18753 Selenicereus undatus HOM05D001468 ORTHO05D001404 1.6e-07 59.7 44 65.9
A03p10770 Brassica napus HOM05D001468 ORTHO05D001404 2.1e-07 59.3 52 65.4
Ca_19403_v3 Cicer arietinum L. HOM05D001468 ORTHO05D001404 2.1e-07 59.3 51 58.8
QL04p045985 Quercus lobata HOM05D001468 ORTHO05D001404 2.1e-07 59.3 45 62.2
Phvul.011G093600 Phaseolus vulgaris HOM05D001468 ORTHO05D001404 2.7e-07 58.9 51 58.8
Thecc.10G112000 Theobroma cacao HOM05D001468 ORTHO05D001404 2.7e-07 58.9 51 56.9
Rhsim03G0098300 Rhododendron simsii HOM05D001468 ORTHO05D001404 3.5e-07 58.5 46 58.7
Sed0010311 Sechium edule HOM05D001468 ORTHO05D001404 3.5e-07 58.5 51 54.9
VMungo1127G2223 Vigna mungo HOM05D001468 ORTHO05D001404 3.5e-07 58.5 51 58.8
Cc02_g09670 Coffea canephora HOM05D001468 ORTHO05D001404 4.6e-07 58.2 55 60.0
Peaxi162Scf00173g00326 Petunia axillaris HOM05D001468 ORTHO05D001404 6.0e-07 57.8 57 54.4
Actinidia34721 Actinidia chinensis HOM05D001468 ORTHO05D001404 7.9e-07 57.4 68 45.6
AUR62009765 Chenopodium quinoa HOM05D001468 ORTHO05D001404 1.0e-06 57.0 44 65.9
AUR62039212 Chenopodium quinoa HOM05D001468 ORTHO05D001404 1.0e-06 57.0 44 65.9
AUR62043884 Chenopodium quinoa HOM05D001468 ORTHO05D001404 1.0e-06 57.0 44 65.9
Dinv09611 Davidia involucrata HOM05D001468 ORTHO05D001404 1.0e-06 57.0 44 61.4
Medtr4g053240 Medicago truncatula HOM05D001468 ORTHO05D001404 1.0e-06 57.0 51 58.8
Oeu025601.3 Olea europaea HOM05D001468 ORTHO05D001404 1.0e-06 57.0 55 58.2
arahy.Tifrunner.gnm1.ann1.4Q6J36 Arachis hypogaea HOM05D001468 ORTHO05D001404 1.3e-06 56.6 81 45.7
Glyma.10G279400 Glycine max HOM05D001468 ORTHO05D001404 1.3e-06 56.6 66 45.5
Lj3g0024252 Lotus japonicus HOM05D001468 ORTHO05D001404 1.3e-06 56.6 51 56.9
Nitab4.5_0001437g0050 Nicotiana tabacum HOM05D001468 ORTHO05D001404 1.3e-06 56.6 52 53.8
Nitab4.5_0005622g0050 Nicotiana tabacum HOM05D001468 ORTHO05D001404 1.3e-06 56.6 52 53.8
CDE02G0607 Ceratophyllum demersum HOM05D001468 ORTHO05D001404 2.3e-06 55.8 47 55.3
arahy.Tifrunner.gnm1.ann1.HCKF4Q Arachis hypogaea HOM05D001468 ORTHO05D001404 3.0e-06 55.5 81 45.7
CDE08G1280 Ceratophyllum demersum HOM05D001468 ORTHO05D001404 3.0e-06 55.5 47 53.2
Prupe.2G075900 Prunus persica HOM05D001468 ORTHO05D001404 3.0e-06 55.5 43 62.8
THA.LOC104799550 Tarenaya hassleriana HOM05D001468 ORTHO05D001404 3.0e-06 55.5 54 55.6
TPR.G17221 Trifolium pratense HOM05D001468 ORTHO05D001404 3.9e-06 55.1 51 56.9
Potri.008G020600 Populus trichocarpa HOM05D001468 ORTHO05D001404 5.1e-06 54.7 69 43.5
TWI38G1645 Tripterygium wilfordii HOM05D001468 ORTHO05D001404 5.1e-06 54.7 42 64.3
Aqoxy4G02787 Aquilegia oxysepala HOM05D001468 ORTHO05D001404 6.7e-06 54.3 78 39.7
Ciclev10014071m.g Citrus clementina HOM05D001468 ORTHO05D001404 6.7e-06 54.3 43 53.5
PSO384G0634 Papaver somniferum HOM05D001468 ORTHO05D001404 8.7e-06 53.9 47 61.7


User provided reference genes

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