Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 1.0e-79 300.1 158 100.0
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 1.0e-79 300.1 158 100.0
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 1.7e-45 186.4 161 65.2
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 1.7e-42 176.4 161 62.1
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 6.5e-42 174.5 161 61.5
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 6.5e-42 174.5 161 61.5
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 5.5e-41 171.4 161 64.0
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 2.1e-40 169.5 163 61.3
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 8.0e-40 167.5 161 60.9
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 2.0e-38 162.9 158 63.3
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 3.4e-38 162.2 112 71.4
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 7.5e-38 161.0 126 68.3
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 8.3e-37 157.5 156 59.0
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 1.1e-36 157.1 171 61.4
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 1.4e-36 156.8 120 68.3
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.4e-36 156.8 130 67.7
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 1.4e-36 156.8 169 57.4
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 1.8e-36 156.4 127 66.1
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 2.4e-36 156.0 130 67.7
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 4.1e-36 155.2 108 76.9
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 4.1e-36 155.2 157 60.5
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 9.2e-36 154.1 99 81.8
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 9.2e-36 154.1 111 71.2
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.2e-35 153.7 148 63.5
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 1.2e-35 153.7 170 56.5
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 1.2e-35 153.7 98 78.6
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 1.2e-35 153.7 98 78.6
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 2.0e-35 152.9 157 57.3
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 2.7e-35 152.5 164 61.6
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 3.5e-35 152.1 104 71.2
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 4.5e-35 151.8 168 60.7
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 1.7e-34 149.8 162 54.9
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.3e-34 149.4 113 68.1
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 2.3e-34 149.4 164 61.0
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 3.8e-34 148.7 157 56.7
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 6.6e-34 147.9 146 61.6
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 8.6e-34 147.5 119 68.9
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 8.6e-34 147.5 122 68.0
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 8.6e-34 147.5 108 70.4
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 1.5e-33 146.7 111 70.3
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 1.5e-33 146.7 167 57.5
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 3.3e-33 145.6 166 56.0
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 4.3e-33 145.2 98 74.5
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 4.3e-33 145.2 171 55.6
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 4.3e-33 145.2 164 60.4
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 6.1e-32 141.4 153 56.2
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 1.4e-31 140.2 140 54.3
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 2.3e-31 139.4 111 65.8
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 3.0e-31 139.0 159 56.6
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 4.0e-31 138.7 125 65.6
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 4.0e-31 138.7 84 81.0
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 4.0e-31 138.7 140 53.6
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 5.2e-31 138.3 158 51.9
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 5.2e-31 138.3 96 72.9
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 5.2e-31 138.3 140 55.7
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 5.2e-31 138.3 168 57.1
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 6.8e-31 137.9 105 71.4
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 1.2e-30 137.1 97 74.2
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 1.5e-30 136.7 85 74.1
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 2.6e-30 136.0 150 53.3
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 1.7e-29 133.3 161 52.8
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 2.2e-29 132.9 98 68.4
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 2.2e-29 132.9 171 45.0
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 2.9e-29 132.5 161 52.8
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 8.3e-29 131.0 104 68.3
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 8.3e-29 131.0 86 70.9
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 3.2e-28 129.0 161 54.0
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 3.2e-28 129.0 171 49.7
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 5.4e-28 128.3 164 53.0
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 1.2e-27 127.1 161 54.0
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 1.6e-27 126.7 162 50.6
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 4.6e-27 125.2 162 53.1
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 4.6e-27 125.2 162 53.1
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 4.6e-27 125.2 162 53.1
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 4.6e-27 125.2 92 69.6
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 5.9e-27 124.8 104 65.4
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 5.9e-27 124.8 104 63.5
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 7.8e-27 124.4 102 66.7
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 7.8e-27 124.4 102 66.7
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 1.0e-26 124.0 90 70.0
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 5.0e-26 121.7 163 49.1
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 4.3e-25 118.6 92 65.2
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 2.1e-24 116.3 169 49.7
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 8.0e-24 114.4 163 49.1
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 6.8e-23 111.3 114 55.3
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 2.0e-22 109.8 95 64.2
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 3.4e-22 109.0 115 61.7
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 4.1e-20 102.1 58 81.0
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 3.5e-19 99.0 163 47.2
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 1.3e-18 97.1 92 58.7
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 1.7e-18 96.7 92 58.7
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 2.8e-16 89.4 143 42.7
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 4.7e-16 88.6 45 77.8
Prupe.6G149200 Prunus persica HOM05D007375 ORTHO05D009293 1.1e-15 87.4 104 51.9
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 1.9e-12 76.6 116 45.7
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 2.1e-11 73.2 56 67.9
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 3.9e-10 68.9 68 55.9
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 3.1e-07 59.3 31 74.2
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 5.2e-07 58.5 36 75.0
Cre03.g201050 Chlamydomonas reinhardtii HOM05D007375 ORTHO05D009293 8.9e-07 57.8 106 31.1
DCAR_012259 Daucus carota HOM05D007375 ORTHO05D009293 3.4e-06 55.8 102 45.1
PGR119G2080 Punica granatum HOM05D007375 ORTHO05D009293 4.4e-06 55.5 42 61.9


User provided reference genes

Program Settings