Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.3008 Acer truncatum HOM05D002956 ORTHO05D008031 2.7e-71 271.9 140 100.0
Cpa.g.sc34.183 Carica papaya HOM05D002956 ORTHO05D008031 4.9e-49 198.0 111 84.7
Dinv36148 Davidia involucrata HOM05D002956 ORTHO05D008031 4.9e-49 198.0 120 80.0
RcHm_v2.0_Chr5g0050251 Rosa chinensis HOM05D002956 ORTHO05D008031 1.1e-48 196.8 111 82.9
Prupe.4G260400 Prunus persica HOM05D002956 ORTHO05D008031 7.1e-48 194.1 109 84.4
Haze_23261 Corylus avellana HOM05D002956 ORTHO05D008031 1.0e-46 190.3 108 80.6
Sabra09G0051500 Salix brachista HOM05D002956 ORTHO05D008031 1.3e-46 189.9 111 82.0
AUR62000217 Chenopodium quinoa HOM05D002956 ORTHO05D008031 2.3e-46 189.1 106 83.0
Potri.009G068400 Populus trichocarpa HOM05D002956 ORTHO05D008031 1.5e-45 186.4 111 81.1
TAR369G0726 Trochodendron aralioides HOM05D002956 ORTHO05D008031 1.9e-45 186.0 109 80.7
Ciclev10018203m.g Citrus clementina HOM05D002956 ORTHO05D008031 2.5e-45 185.7 110 80.9
DCAR_006894 Daucus carota HOM05D002956 ORTHO05D008031 3.3e-45 185.3 108 81.5
Eucgr.J00675 Eucalyptus grandis HOM05D002956 ORTHO05D008031 3.3e-45 185.3 107 82.2
MELO3C014548.2 Cucumis melo HOM05D002956 ORTHO05D008031 4.3e-45 184.9 112 77.7
Thhalv10002083m.g Eutrema salsugineum HOM05D002956 ORTHO05D008031 4.3e-45 184.9 108 78.7
FvH4_3g28160 Fragaria vesca HOM05D002956 ORTHO05D008031 4.3e-45 184.9 110 82.7
Actinidia06980 Actinidia chinensis HOM05D002956 ORTHO05D008031 5.6e-45 184.5 106 83.0
THA.LOC104826460 Tarenaya hassleriana HOM05D002956 ORTHO05D008031 5.6e-45 184.5 106 83.0
Cc01_g06320 Coffea canephora HOM05D002956 ORTHO05D008031 7.3e-45 184.1 113 74.3
Manes.02G137300 Manihot esculenta HOM05D002956 ORTHO05D008031 7.3e-45 184.1 108 80.6
MSTRG.12436 Avicennia marina HOM05D002956 ORTHO05D008031 9.6e-45 183.7 109 78.0
COL.COLO4_07384 Corchorus olitorius HOM05D002956 ORTHO05D008031 9.6e-45 183.7 116 75.0
Gohir.A07G121300 Gossypium hirsutum HOM05D002956 ORTHO05D008031 9.6e-45 183.7 118 74.6
Nn7g36838 Nelumbo nucifera HOM05D002956 ORTHO05D008031 9.6e-45 183.7 104 78.8
CiPaw.14G111000 Carya illinoinensis HOM05D002956 ORTHO05D008031 1.2e-44 183.3 109 78.0
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 1.6e-44 183.0 107 78.5
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 1.6e-44 183.0 107 78.5
Sc06g0004740 Simmondsia chinensis HOM05D002956 ORTHO05D008031 2.1e-44 182.6 106 81.1
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 3.6e-44 181.8 108 76.9
Sp4g08660 Schrenkiella parvula HOM05D002956 ORTHO05D008031 3.6e-44 181.8 105 79.0
GSVIVG01037341001 Vitis vinifera HOM05D002956 ORTHO05D008031 3.6e-44 181.8 110 80.9
Thecc.09G246000 Theobroma cacao HOM05D002956 ORTHO05D008031 6.2e-44 181.0 110 77.3
Migut.N02382 Erythranthe guttata HOM05D002956 ORTHO05D008031 8.1e-44 180.6 111 78.4
TWI31G0384 Tripterygium wilfordii HOM05D002956 ORTHO05D008031 8.1e-44 180.6 110 78.2
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 1.1e-43 180.3 108 76.9
CARHR118990 Cardamine hirsuta HOM05D002956 ORTHO05D008031 1.1e-43 180.3 106 78.3
Gohir.D07G125600 Gossypium hirsutum HOM05D002956 ORTHO05D008031 1.1e-43 180.3 119 73.1
Gorai.001G135400 Gossypium raimondii HOM05D002956 ORTHO05D008031 1.1e-43 180.3 119 73.1
FAN16G1792 Fragaria x ananassa HOM05D002956 ORTHO05D008031 1.4e-43 179.9 103 82.5
Hund07424 Selenicereus undatus HOM05D002956 ORTHO05D008031 1.8e-43 179.5 106 80.2
ClCG02G022710 Citrullus lanatus HOM05D002956 ORTHO05D008031 2.4e-43 179.1 109 76.1
Sopen11g024800 Solanum pennellii HOM05D002956 ORTHO05D008031 2.4e-43 179.1 118 72.0
PGSC0003DMG400031243 Solanum tuberosum HOM05D002956 ORTHO05D008031 2.4e-43 179.1 116 69.8
Aqoxy2G00442 Aquilegia oxysepala HOM05D002956 ORTHO05D008031 3.1e-43 178.7 107 77.6
MD00G1134600 Malus domestica HOM05D002956 ORTHO05D008031 3.1e-43 178.7 99 83.8
CSS0006448 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D008031 5.2e-43 177.9 103 80.6
Sed0014482 Sechium edule HOM05D002956 ORTHO05D008031 6.9e-43 177.6 109 74.3
FAN11G2127 Fragaria x ananassa HOM05D002956 ORTHO05D008031 1.2e-42 176.8 107 81.3
Lj6g0022582 Lotus japonicus HOM05D002956 ORTHO05D008031 1.5e-42 176.4 108 75.0
TPR.G11875 Trifolium pratense HOM05D002757 ORTHO05D008031 1.5e-42 176.4 106 75.5
Ca_25980_v3 Cicer arietinum L. HOM05D002956 ORTHO05D008031 3.4e-42 175.3 104 76.9
HanXRQChr12g0380421 Helianthus annuus HOM05D002956 ORTHO05D008031 4.4e-42 174.9 106 79.2
arahy.Tifrunner.gnm1.ann1.XLU01S Arachis hypogaea HOM05D002956 ORTHO05D008031 7.6e-42 174.1 106 73.6
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 9.9e-42 173.7 101 78.2
Phvul.005G020600 Phaseolus vulgaris HOM05D002956 ORTHO05D008031 1.3e-41 173.3 108 73.1
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 1.7e-41 172.9 101 77.2
AT2G26810 Arabidopsis thaliana HOM05D002956 ORTHO05D008031 2.2e-41 172.6 106 76.4
HPP92_001025 Vanilla planifolia HOM05D002956 ORTHO05D008031 2.2e-41 172.6 109 72.5
Duzib150G0193 Durio zibethinus HOM05D002956 ORTHO05D008031 3.8e-41 171.8 119 71.4
PSO339G2954 Papaver somniferum HOM05D002956 ORTHO05D008031 3.8e-41 171.8 119 68.1
Carub.0004s0727 Capsella rubella HOM05D002956 ORTHO05D008031 4.9e-41 171.4 106 77.4
ECA233G6038 Erigeron canadensis HOM05D002956 ORTHO05D008031 4.9e-41 171.4 113 73.5
ATR0307G044 Amborella trichopoda HOM05D002956 ORTHO05D008031 6.4e-41 171.0 106 73.6
Psat5g191880 Pisum sativum HOM05D002956 ORTHO05D008031 8.4e-41 170.6 104 74.0
AL4G20000 Arabidopsis lyrata HOM05D002956 ORTHO05D008031 1.4e-40 169.9 105 75.2
Glyma.08G154800 Glycine max HOM05D002956 ORTHO05D008031 1.4e-40 169.9 109 72.5
MBI19_g19211_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D008031 1.4e-40 169.9 117 70.1
CDE04G0360 Ceratophyllum demersum HOM05D002956 ORTHO05D008031 2.4e-40 169.1 111 71.2
Lalb_Chr15g0078511 Lupinus albus HOM05D002956 ORTHO05D008031 2.4e-40 169.1 108 74.1
QL01p016670 Quercus lobata HOM05D002956 ORTHO05D008031 2.4e-40 169.1 120 70.0
Oeu061696.1 Olea europaea HOM05D002956 ORTHO05D008031 4.2e-40 168.3 140 61.4
CANSAT54G1478 Cannabis sativa HOM05D002956 ORTHO05D008031 7.1e-40 167.5 108 74.1
Medtr3g045720 Medicago truncatula HOM05D002956 ORTHO05D008031 7.1e-40 167.5 109 73.4
SGA_v2.0_scaffold26G11398 Striga asiatica HOM05D002956 ORTHO05D008031 1.6e-39 166.4 123 65.9
Zm00001eb329010 Zea mays HOM05D002956 ORTHO05D008031 1.0e-38 163.7 110 68.2
EL10Ac4g10091 Beta vulgaris HOM05D002956 ORTHO05D008031 1.9e-37 159.5 107 72.9
PGR119G0612 Punica granatum HOM05D002956 ORTHO05D008031 1.6e-36 156.4 134 59.7
SEGI_15484 Sequoiadendron giganteum HOM05D002956 ORTHO05D008031 1.6e-36 156.4 110 64.5
Os07g0641600 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D008031 2.8e-36 155.6 99 70.7
SEGI_28475 Sequoiadendron giganteum HOM05D002956 ORTHO05D008031 1.8e-35 152.9 108 63.9
arahy.Tifrunner.gnm1.ann1.1Z9FJQ Arachis hypogaea HOM05D002956 ORTHO05D008031 3.1e-35 152.1 106 67.0
VMungo1080G1429 Vigna mungo HOM05D002956 ORTHO05D008031 1.3e-33 146.7 107 64.5
AUR62006562 Chenopodium quinoa HOM05D002956 ORTHO05D008031 3.8e-33 145.2 128 60.2
Psat4g060320 Pisum sativum HOM05D002956 ORTHO05D008031 6.4e-33 144.4 94 69.1
Rhsim13G0206100 Rhododendron simsii HOM05D002956 ORTHO05D008031 4.2e-32 141.7 83 79.5
FAN21G3062 Fragaria x ananassa HOM05D002956 ORTHO05D008031 7.1e-32 141.0 85 83.5
PSO384G3941 Papaver somniferum HOM05D002956 ORTHO05D008031 4.6e-31 138.3 119 59.7
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 6.0e-31 137.9 104 58.7
vmacro04048 Vaccinium macrocarpon HOM05D002956 ORTHO05D008031 4.3e-29 131.7 91 72.5
AagrBONN_evm.TU.Sc2ySwM_228.3973 Anthoceros agrestis HOM05D002956 ORTHO05D008031 2.1e-28 129.4 103 57.3
Nitab4.5_0007012g0050 Nicotiana tabacum HOM05D002956 ORTHO05D008031 9.0e-27 124.0 94 59.6
Pp3c3_3430 Physcomitrium patens HOM05D002956 ORTHO05D008031 1.7e-25 119.8 107 48.6
Aa31LG5G8970 Aethionema arabicum HOM05D002956 ORTHO05D008031 3.8e-25 118.6 80 72.5
CBR_g39846 Chara braunii HOM05D002956 ORTHO05D008031 1.9e-24 116.3 104 50.0
Lsat_1_v5_gn_5_63100 Lactuca sativa HOM05D002956 ORTHO05D008031 1.3e-22 110.2 136 46.3
Nitab4.5_0004018g0060 Nicotiana tabacum HOM05D002956 ORTHO05D008031 5.1e-22 108.2 74 71.6
FAN25G3179 Fragaria x ananassa HOM05D002956 ORTHO05D008031 1.1e-19 100.5 56 76.8
Psat2g099480 Pisum sativum HOM05D002956 ORTHO05D008031 4.9e-17 91.7 119 47.1
Psat5g130120 Pisum sativum HOM05D001082 ORTHO05D001538 4.6e-15 85.1 104 48.1
Psat2g099560 Pisum sativum HOM05D001082 ORTHO05D001538 6.0e-15 84.7 104 48.1
Solyc11g065040.2 Solanum lycopersicum HOM05D002956 ORTHO05D008031 2.3e-14 82.8 57 63.2
Ah.06g194770 Amaranthus hybridus HOM05D002956 ORTHO05D008031 3.9e-14 82.0 150 37.3
FAN25G0087 Fragaria x ananassa HOM05D002956 ORTHO05D008031 3.9e-14 82.0 47 72.3
Peaxi162Scf00004g04220 Petunia axillaris HOM05D002956 ORTHO05D008031 4.3e-13 78.6 49 61.2
Zm00001eb110260 Zea mays HOM05D002956 ORTHO05D008031 5.7e-13 78.2 51 66.7
CAN.G468.2 Capsicum annuum HOM05D002956 ORTHO05D008031 5.3e-11 71.6 56 60.7
Psat4g143640 Pisum sativum HOM05D002956 ORTHO05D008031 1.1e-08 63.9 118 38.1
CAN.G1049.9 Capsicum annuum HOM05D002956 ORTHO05D008031 3.6e-07 58.9 36 63.9
MCO09G596 Micromonas commoda HOM05D002956 ORTHO05D008031 4.6e-07 58.5 79 34.2
AagrBONN_evm.TU.Sc2ySwM_344.5185 Anthoceros agrestis HOM05D006908 ORTHO05D008662 1.0e-06 57.4 65 40.0
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 2.3e-06 56.2 58 43.1
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 2.3e-06 56.2 78 35.9
Pp3c3_3178 Physcomitrium patens HOM05D006745 ORTHO05D008449 2.3e-06 56.2 78 35.9
unitig_22.g6189 Utricularia gibba HOM05D002956 ORTHO05D008031 3.0e-06 55.8 113 31.9
BcaC08g47592 Brassica carinata HOM05D002960 ORTHO05D003632 3.9e-06 55.5 58 41.4
C06p54330 Brassica napus HOM05D002960 ORTHO05D003632 6.7e-06 54.7 55 41.8
BolC6t40444H Brassica oleracea HOM05D002960 ORTHO05D003632 6.7e-06 54.7 55 41.8
BraA07t32051Z Brassica rapa HOM05D006908 ORTHO05D008662 6.7e-06 54.7 55 41.8
Dinv04583 Davidia involucrata HOM05D002956 ORTHO05D008031 6.7e-06 54.7 35 68.6
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 6.7e-06 54.7 103 32.0
Rhsim08G0125500 Rhododendron simsii HOM05D001602 ORTHO05D001470 6.7e-06 54.7 88 31.8


User provided reference genes

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