Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 4.2e-149 531.2 242 100.0
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 3.7e-97 358.6 239 68.6
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 7.1e-96 354.4 241 69.3
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 9.2e-96 354.0 240 69.6
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 3.5e-95 352.1 210 73.8
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 6.0e-95 351.3 243 65.4
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 3.0e-94 349.0 242 64.9
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 1.5e-93 346.7 250 66.4
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 4.3e-93 345.1 238 66.0
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 2.1e-92 342.8 240 66.7
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 3.6e-92 342.0 243 63.4
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 4.7e-92 341.7 241 65.1
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 8.1e-92 340.9 241 66.0
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 1.1e-91 340.5 240 66.2
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 1.4e-91 340.1 263 62.7
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 1.8e-91 339.7 233 64.8
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 5.2e-91 338.2 225 67.1
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 8.9e-91 337.4 240 66.2
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 2.6e-90 335.9 242 64.5
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 5.8e-90 334.7 224 66.5
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 9.9e-90 334.0 230 65.7
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 8.4e-89 330.9 248 64.9
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.9e-88 329.7 234 62.8
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 2.4e-88 329.3 234 62.4
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 3.2e-88 328.9 233 62.7
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 4.2e-88 328.6 244 64.3
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 4.2e-88 328.6 244 64.3
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 2.7e-87 325.9 226 64.2
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 4.6e-87 325.1 226 63.3
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 1.1e-85 320.5 226 61.9
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 1.1e-85 320.5 217 65.9
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 1.9e-85 319.7 241 60.2
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 9.6e-85 317.4 226 65.5
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 4.8e-84 315.1 246 62.6
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 1.4e-83 313.5 238 59.7
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 1.4e-83 313.5 203 69.0
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 2.4e-83 312.8 246 62.2
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 2.4e-83 312.8 239 60.7
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 5.3e-83 311.6 207 65.2
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 1.5e-82 310.1 238 59.2
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 2.0e-82 309.7 238 64.3
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.0e-82 309.7 227 61.7
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 2.6e-82 309.3 208 67.8
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 3.4e-82 308.9 225 59.6
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 4.4e-82 308.5 229 65.1
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 5.8e-82 308.1 246 63.8
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 5.8e-82 308.1 220 63.2
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 1.7e-81 306.6 252 60.3
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 2.2e-81 306.2 232 59.9
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 2.9e-81 305.8 206 65.0
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 2.9e-81 305.8 238 59.2
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 3.8e-81 305.4 211 65.4
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 3.8e-81 305.4 200 67.0
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 4.9e-81 305.1 234 59.8
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 6.4e-81 304.7 222 60.8
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 1.1e-80 303.9 224 62.9
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 1.4e-80 303.5 200 71.5
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 3.2e-80 302.4 220 64.5
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 3.2e-80 302.4 238 62.6
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 4.2e-80 302.0 234 62.4
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 5.4e-80 301.6 227 57.7
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 5.4e-80 301.6 237 57.0
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 5.4e-80 301.6 216 62.0
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 5.4e-80 301.6 233 61.4
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 9.3e-80 300.8 222 60.4
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 2.1e-79 299.7 227 58.6
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 3.5e-79 298.9 249 61.8
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 1.3e-78 297.0 220 63.2
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 1.3e-78 297.0 220 63.2
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.7e-78 296.6 204 64.2
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 3.0e-78 295.8 229 63.8
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 3.9e-78 295.4 244 58.6
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 3.9e-78 295.4 222 59.9
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 8.7e-78 294.3 234 59.4
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 1.1e-77 293.9 251 54.6
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 1.9e-77 293.1 261 55.9
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 3.3e-77 292.4 253 58.1
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 3.3e-77 292.4 270 53.7
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 4.3e-77 292.0 264 54.9
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 7.3e-77 291.2 225 60.0
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 1.3e-76 290.4 223 58.7
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 8.1e-76 287.7 242 56.6
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 6.9e-75 284.6 232 57.3
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.3e-73 280.4 213 60.6
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 1.3e-73 280.4 241 56.4
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 2.2e-73 279.6 198 65.7
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 4.9e-73 278.5 201 61.7
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 6.4e-73 278.1 220 61.4
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 6.4e-73 278.1 235 55.7
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 2.4e-72 276.2 227 53.7
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 4.2e-72 275.4 213 60.1
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 9.3e-72 274.2 235 55.3
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.1e-71 273.1 174 71.3
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 2.7e-71 272.7 214 58.9
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 6.0e-71 271.6 206 62.6
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 7.9e-71 271.2 174 70.7
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 7.9e-71 271.2 174 70.7
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 2.3e-70 269.6 201 63.2
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 2.3e-70 269.6 174 69.5
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 3.3e-69 265.8 238 54.2
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 3.1e-67 259.2 208 60.1
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 3.1e-67 259.2 208 60.1
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 3.5e-63 245.7 231 52.8
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 8.7e-62 241.1 212 55.7
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.5e-61 240.4 229 52.4
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 9.6e-61 237.7 229 51.1
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 6.9e-59 231.5 128 74.2
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 5.5e-56 221.9 189 56.1
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 7.2e-56 221.5 124 74.2
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 3.5e-55 219.2 161 60.9
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.5e-53 213.8 153 60.8
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 4.3e-53 212.2 233 51.1
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 1.2e-47 194.1 145 56.6
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 4.4e-37 159.1 122 55.7
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 6.5e-33 145.2 120 52.5
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 1.9e-32 143.7 84 66.7
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 4.2e-32 142.5 120 50.8
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 6.7e-30 135.2 81 67.9
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 2.7e-26 123.2 102 50.0
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.4e-14 84.3 161 34.8
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 1.8e-06 57.4 109 37.6


User provided reference genes

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