Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 2.0e-99 365.9 209 100.0
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 1.0e-95 353.6 230 90.9
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 3.1e-84 315.5 201 85.6
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 3.7e-77 292.0 202 81.2
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 1.1e-76 290.4 202 80.2
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.8e-76 289.7 203 75.4
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.8e-76 289.7 203 75.4
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 2.4e-76 289.3 202 81.7
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.1e-76 288.9 203 80.3
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 7.0e-76 287.7 202 81.7
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 1.2e-75 287.0 205 78.0
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 2.0e-75 286.2 202 78.7
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 2.0e-75 286.2 202 81.2
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 2.0e-75 286.2 202 81.2
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 3.5e-75 285.4 203 80.3
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 4.5e-75 285.0 201 81.1
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 5.9e-75 284.6 202 80.7
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 1.0e-74 283.9 202 79.2
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 2.3e-74 282.7 202 80.2
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.9e-74 282.0 202 79.2
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 8.6e-74 280.8 202 79.2
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 8.6e-74 280.8 202 78.2
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.5e-73 280.0 202 79.7
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 3.3e-73 278.9 202 77.2
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 4.3e-73 278.5 202 78.2
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 4.3e-73 278.5 202 78.2
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 4.3e-73 278.5 202 78.7
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 5.6e-73 278.1 202 79.7
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 4.7e-72 275.0 202 67.8
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 8.0e-72 274.2 230 70.0
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 8.0e-72 274.2 202 68.3
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 1.8e-71 273.1 185 82.2
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 6.8e-71 271.2 192 68.8
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.2e-70 270.4 202 72.8
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 1.2e-70 270.4 194 77.8
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 1.5e-70 270.0 200 74.5
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 2.6e-70 269.2 200 74.5
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 4.4e-70 268.5 193 67.9
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 7.5e-70 267.7 194 76.3
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 1.3e-69 266.9 194 75.8
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 1.3e-69 266.9 194 75.8
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 2.2e-69 266.2 200 66.0
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 6.4e-69 264.6 202 75.7
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 8.3e-69 264.2 194 75.8
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 3.2e-68 262.3 202 63.9
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 5.4e-68 261.5 189 76.7
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 7.0e-68 261.2 200 65.5
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 2.0e-67 259.6 201 71.6
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 2.7e-67 259.2 184 66.8
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 2.7e-67 259.2 200 65.0
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 3.5e-67 258.8 189 76.7
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 6.0e-67 258.1 228 68.4
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 7.8e-67 257.7 194 74.7
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 7.8e-67 257.7 191 77.5
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 1.7e-66 256.5 202 64.9
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 3.0e-66 255.8 201 64.2
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 6.6e-66 254.6 191 75.9
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 6.6e-66 254.6 192 73.4
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 1.1e-65 253.8 194 74.2
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 1.5e-65 253.4 191 74.9
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 1.5e-65 253.4 191 74.9
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 1.5e-65 253.4 191 74.9
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 1.5e-65 253.4 242 55.4
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 1.9e-65 253.1 190 75.8
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 2.5e-65 252.7 188 76.6
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 2.5e-65 252.7 191 74.3
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 2.5e-65 252.7 200 72.0
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 3.3e-65 252.3 190 75.8
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 4.3e-65 251.9 200 71.5
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 4.3e-65 251.9 208 67.8
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 4.3e-65 251.9 200 61.5
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 5.6e-65 251.5 191 74.3
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 5.6e-65 251.5 184 78.8
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 7.3e-65 251.1 184 68.5
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 7.3e-65 251.1 184 68.5
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 9.5e-65 250.8 184 77.2
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 9.5e-65 250.8 189 72.0
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 1.2e-64 250.4 184 76.6
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 1.6e-64 250.0 185 75.7
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 2.1e-64 249.6 190 74.7
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 2.8e-64 249.2 199 61.8
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 2.8e-64 249.2 184 77.2
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 2.8e-64 249.2 191 74.3
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 3.6e-64 248.8 191 68.6
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 3.6e-64 248.8 191 72.3
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 6.2e-64 248.1 190 74.7
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 8.0e-64 247.7 186 66.7
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 2.3e-63 246.1 200 69.5
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 2.3e-63 246.1 227 57.3
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 3.1e-63 245.7 142 79.6
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 5.2e-63 245.0 184 75.5
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 5.2e-63 245.0 190 72.6
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 2.6e-62 242.7 192 72.9
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 5.8e-62 241.5 202 69.3
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 2.9e-61 239.2 190 71.6
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 4.9e-61 238.4 185 63.8
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 4.9e-61 238.4 175 78.3
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 6.4e-61 238.0 184 75.5
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 5.4e-60 235.0 189 64.6
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 2.7e-59 232.6 184 74.5
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 3.5e-59 232.3 194 67.0
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 7.8e-59 231.1 191 70.2
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 1.0e-58 230.7 142 74.6
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.3e-58 230.3 190 68.9
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 1.3e-58 230.3 188 60.6
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 2.3e-58 229.6 184 73.9
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 4.9e-53 211.8 194 56.2
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 9.2e-52 207.6 200 54.0
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 8.6e-50 201.1 193 55.4
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 6.8e-47 191.4 157 74.5
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 5.4e-44 181.8 185 59.5
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 1.7e-42 176.8 191 61.3
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 1.1e-41 174.1 139 61.9
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 9.9e-38 161.0 181 45.9
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 7.1e-36 154.8 142 52.8
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 9.3e-36 154.5 185 53.0
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 2.7e-27 126.3 178 50.0
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.0e-22 110.2 73 71.2
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 1.1e-20 104.4 102 70.6
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 3.2e-12 76.3 46 71.7
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 2.1e-11 73.6 53 64.2
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 6.7e-10 68.6 100 43.0
Aqoxy4G02446 Aquilegia oxysepala HOM05D001818 ORTHO05D001780 1.5e-06 57.4 71 33.8
RcHm_v2.0_Chr3g0487451 Rosa chinensis HOM05D032618 ORTHO05D007999 5.9e-06 55.5 30 80.0
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-05 54.7 109 33.0


User provided reference genes

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