Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.2860 Acer truncatum HOM05D005119 ORTHO05D006338 3.3e-119 431.8 226 100.0
Lalb_Chr17g0347491 Lupinus albus HOM05D005119 ORTHO05D006338 3.3e-111 405.2 228 92.1
RcHm_v2.0_Chr5g0049761 Rosa chinensis HOM05D005119 ORTHO05D006338 2.1e-110 402.5 226 92.9
PGR102G2321 Punica granatum HOM05D005119 ORTHO05D006338 3.6e-110 401.7 227 92.5
CSS0022741 Camellia sinensis var. sinensis HOM05D005119 ORTHO05D006338 8.0e-110 400.6 230 91.3
FAN21G1454 Fragaria x ananassa HOM05D005119 ORTHO05D006338 8.0e-110 400.6 229 91.7
Prupe.6G153600 Prunus persica HOM05D005119 ORTHO05D006338 1.0e-109 400.2 227 92.5
FAN21G3401 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.4e-109 399.8 229 91.3
Gohir.D08G008500 Gossypium hirsutum HOM05D005119 ORTHO05D006338 6.8e-109 397.5 227 92.5
Gorai.004G001700 Gossypium raimondii HOM05D005119 ORTHO05D006338 6.8e-109 397.5 227 92.5
Dinv25746 Davidia involucrata HOM05D005119 ORTHO05D006338 8.9e-109 397.1 227 92.1
Cc01_g07550 Coffea canephora HOM05D005119 ORTHO05D006338 2.6e-108 395.6 226 91.2
Ca_06151_v3 Cicer arietinum L. HOM05D005119 ORTHO05D006338 4.4e-108 394.8 234 88.5
Dinv05232 Davidia involucrata HOM05D005119 ORTHO05D006338 4.4e-108 394.8 227 91.2
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 4.4e-108 394.8 227 90.7
Duzib170G0448 Durio zibethinus HOM05D005119 ORTHO05D006338 9.8e-108 393.7 227 92.1
Oeu026660.1 Olea europaea HOM05D005119 ORTHO05D006338 9.8e-108 393.7 227 90.3
AT5G21070 Arabidopsis thaliana HOM05D005119 ORTHO05D006338 1.3e-107 393.3 226 90.7
SalBow3G0587 Salvia bowleyana HOM05D005119 ORTHO05D006338 1.3e-107 393.3 223 92.4
Eucgr.B03785 Eucalyptus grandis HOM05D005119 ORTHO05D006338 1.7e-107 392.9 226 90.7
Glyma.02G274200 Glycine max HOM05D005119 ORTHO05D006338 1.7e-107 392.9 227 90.3
Ciclev10016530m.g Citrus clementina HOM05D005119 ORTHO05D006338 2.2e-107 392.5 231 90.0
Thecc.09G337400 Theobroma cacao HOM05D005119 ORTHO05D006338 3.7e-107 391.7 227 91.6
Migut.N02419 Erythranthe guttata HOM05D005119 ORTHO05D006338 4.9e-107 391.3 224 91.5
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla HOM05D005119 ORTHO05D006338 4.9e-107 391.3 231 90.0
Carub.0006s1937 Capsella rubella HOM05D005119 ORTHO05D006338 6.4e-107 391.0 226 90.3
Psat2g022840 Pisum sativum HOM05D005119 ORTHO05D006338 1.4e-106 389.8 232 87.9
GSVIVG01037452001 Vitis vinifera HOM05D005119 ORTHO05D006338 1.4e-106 389.8 229 89.5
AL6G32630 Arabidopsis lyrata HOM05D005119 ORTHO05D006338 1.9e-106 389.4 226 89.8
Actinidia07012 Actinidia chinensis HOM05D005119 ORTHO05D006338 2.4e-106 389.0 224 92.4
Rhsim13G0201000 Rhododendron simsii HOM05D005119 ORTHO05D006338 2.4e-106 389.0 232 87.9
Glyma.14G041900 Glycine max HOM05D005119 ORTHO05D006338 5.4e-106 387.9 229 89.1
Sopen11g029200 Solanum pennellii HOM05D005119 ORTHO05D006338 5.4e-106 387.9 228 90.4
PGSC0003DMG400018703 Solanum tuberosum HOM05D005119 ORTHO05D006338 5.4e-106 387.9 228 90.4
CARHR191800 Cardamine hirsuta HOM05D005119 ORTHO05D006338 7.0e-106 387.5 226 89.8
QL01p020410 Quercus lobata HOM05D005119 ORTHO05D006338 7.0e-106 387.5 231 89.2
unitig_27.g25021 Utricularia gibba HOM05D005119 ORTHO05D006338 7.0e-106 387.5 225 89.3
Aa31LG1G13700 Aethionema arabicum HOM05D005119 ORTHO05D006338 9.2e-106 387.1 226 89.4
VMungo0647G2262 Vigna mungo HOM05D005119 ORTHO05D006338 1.2e-105 386.7 226 89.4
Duzib168G2211 Durio zibethinus HOM05D005119 ORTHO05D006338 1.6e-105 386.3 227 90.7
MELO3C015629.2 Cucumis melo HOM05D005119 ORTHO05D006338 2.0e-105 386.0 231 87.0
Lj2A941G6 Lonicera japonica HOM05D005119 ORTHO05D006338 2.0e-105 386.0 225 91.1
EL10Ac7g16218 Beta vulgaris HOM05D005119 ORTHO05D006338 2.7e-105 385.6 230 90.0
MD11G1180800 Malus domestica HOM05D005119 ORTHO05D006338 2.7e-105 385.6 230 88.7
Phvul.008G207500 Phaseolus vulgaris HOM05D005119 ORTHO05D006338 2.7e-105 385.6 226 90.3
BcaB08g36485 Brassica carinata HOM05D005119 ORTHO05D006338 3.5e-105 385.2 226 88.9
C09p55010 Brassica napus HOM05D005119 ORTHO05D006338 3.5e-105 385.2 227 89.4
Thhalv10014597m.g Eutrema salsugineum HOM05D005119 ORTHO05D006338 3.5e-105 385.2 226 88.9
PSO339G0009 Papaver somniferum HOM05D005119 ORTHO05D006338 3.5e-105 385.2 224 89.3
Sp6g23450 Schrenkiella parvula HOM05D005119 ORTHO05D006338 3.5e-105 385.2 226 88.9
Potri.004G196600 Populus trichocarpa HOM05D005119 ORTHO05D006338 4.6e-105 384.8 229 87.8
TPR.G11644 Trifolium pratense HOM05D005119 ORTHO05D006338 4.6e-105 384.8 232 87.5
TAR636G0794 Trochodendron aralioides HOM05D005119 ORTHO05D006338 6.0e-105 384.4 227 89.9
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea HOM05D005119 ORTHO05D006338 7.8e-105 384.0 230 86.5
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea HOM05D005119 ORTHO05D006338 1.0e-104 383.6 230 86.5
CANSAT54G2327 Cannabis sativa HOM05D005119 ORTHO05D006338 1.0e-104 383.6 230 88.3
SGA_v2.0_scaffold16G07568 Striga asiatica HOM05D005119 ORTHO05D006338 1.0e-104 383.6 225 89.3
vmacro04109 Vaccinium macrocarpon HOM05D005119 ORTHO05D006338 1.0e-104 383.6 235 86.4
CAN.G864.4 Capsicum annuum HOM05D005119 ORTHO05D006338 1.3e-104 383.3 229 89.5
FAN25G0803 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.3e-104 383.3 256 81.2
Lj6g0018237 Lotus japonicus HOM05D005119 ORTHO05D006338 1.3e-104 383.3 229 87.3
Sed0002058 Sechium edule HOM05D005119 ORTHO05D006338 1.3e-104 383.3 231 86.6
Potri.009G158800 Populus trichocarpa HOM05D005119 ORTHO05D006338 1.7e-104 382.9 231 87.9
BolC9t58364H Brassica oleracea HOM05D005119 ORTHO05D006338 2.3e-104 382.5 227 89.0
Peaxi162Scf00217g00811 Petunia axillaris HOM05D005119 ORTHO05D006338 2.3e-104 382.5 228 89.5
A10p19000 Brassica napus HOM05D005119 ORTHO05D006338 3.0e-104 382.1 227 89.0
BraA10t43978Z Brassica rapa HOM05D005119 ORTHO05D006338 3.0e-104 382.1 227 89.0
LjContig00564g0012096 Lotus japonicus HOM05D005119 ORTHO05D006338 3.0e-104 382.1 232 86.6
Nitab4.5_0010431g0020 Nicotiana tabacum HOM05D005119 ORTHO05D006338 3.0e-104 382.1 228 88.6
TWI79G0087 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 3.9e-104 381.7 227 89.4
MSTRG.17662 Avicennia marina HOM05D005119 ORTHO05D006338 5.0e-104 381.3 225 89.3
Gorai.009G105100 Gossypium raimondii HOM05D005119 ORTHO05D006338 5.0e-104 381.3 229 89.5
HanXRQChr13g0420891 Helianthus annuus HOM05D005119 ORTHO05D006338 6.6e-104 380.9 229 87.8
Manes.11G112200 Manihot esculenta HOM05D005119 ORTHO05D006338 6.6e-104 380.9 230 88.3
BcaB05g22789 Brassica carinata HOM05D005119 ORTHO05D006338 8.6e-104 380.6 227 88.5
Gohir.D05G101000 Gossypium hirsutum HOM05D005119 ORTHO05D006338 8.6e-104 380.6 229 89.1
BcaC03g13824 Brassica carinata HOM05D005119 ORTHO05D006338 1.1e-103 380.2 226 88.1
PSO384G4010 Papaver somniferum HOM05D005119 ORTHO05D006338 1.1e-103 380.2 224 88.4
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus HOM05D005119 ORTHO05D006338 1.5e-103 379.8 226 88.1
C02p10590 Brassica napus HOM05D005119 ORTHO05D006338 1.5e-103 379.8 226 88.1
BraA02t05611Z Brassica rapa HOM05D005119 ORTHO05D006338 1.5e-103 379.8 226 88.1
Manes.04G053600 Manihot esculenta HOM05D005119 ORTHO05D006338 1.5e-103 379.8 230 87.8
Medtr5g087720 Medicago truncatula HOM05D005119 ORTHO05D006338 1.5e-103 379.8 223 88.8
PGSC0003DMG400008707 Solanum tuberosum HOM05D005119 ORTHO05D006338 1.5e-103 379.8 227 88.5
MSTRG.12410 Avicennia marina HOM05D005119 ORTHO05D006338 2.5e-103 379.0 225 88.0
BolC2t07092H Brassica oleracea HOM05D005119 ORTHO05D006338 3.3e-103 378.6 226 87.6
ClCG03G014150 Citrullus lanatus HOM05D005119 ORTHO05D006338 3.3e-103 378.6 231 86.6
ECA240G4195 Erigeron canadensis HOM05D005119 ORTHO05D006338 3.3e-103 378.6 237 86.1
Sopen01g004620 Solanum pennellii HOM05D005119 ORTHO05D006338 3.3e-103 378.6 222 89.2
TWI75G0877 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 3.3e-103 378.6 231 88.3
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 4.3e-103 378.3 211 93.8
Gohir.A05G101200 Gossypium hirsutum HOM05D005119 ORTHO05D006338 5.6e-103 377.9 229 88.6
Sed0001894 Sechium edule HOM05D005119 ORTHO05D006338 5.6e-103 377.9 231 86.1
CsaV3_1G042110 Cucumis sativus L. HOM05D005119 ORTHO05D006338 3.6e-102 375.2 231 85.7
DCAR_002131 Daucus carota HOM05D005119 ORTHO05D006338 4.7e-102 374.8 223 87.4
Hund18832 Selenicereus undatus HOM05D005119 ORTHO05D006338 4.7e-102 374.8 208 94.7
THA.LOC104810964 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 1.8e-101 372.9 228 87.3
MBI19_g28105_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 2.3e-101 372.5 224 85.7
THA.LOC104799587 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 2.3e-101 372.5 226 86.3
Sc21g0006500 Simmondsia chinensis HOM05D005119 ORTHO05D006338 4.0e-101 371.7 229 87.3
AUR62001614 Chenopodium quinoa HOM05D005119 ORTHO05D006338 8.9e-101 370.5 229 86.9
Sabra04G0133300 Salix brachista HOM05D005119 ORTHO05D006338 2.0e-100 369.4 229 84.3
Nitab4.5_0001183g0030 Nicotiana tabacum HOM05D005119 ORTHO05D006338 3.4e-100 368.6 216 90.7
Lsat_1_v5_gn_3_116100 Lactuca sativa HOM05D005119 ORTHO05D006338 5.8e-100 367.9 203 93.1
MBI13_g02397_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 5.8e-100 367.9 227 85.0
Aqoxy2G00066 Aquilegia oxysepala HOM05D005119 ORTHO05D006338 7.5e-100 367.5 228 85.1
Os01g0277700 Oryza sativa ssp. japonica HOM05D005119 ORTHO05D006338 1.7e-99 366.3 223 84.8
ATR0307G125 Amborella trichopoda HOM05D005119 ORTHO05D006338 8.3e-99 364.0 224 85.3
Zm00001eb128960 Zea mays HOM05D005119 ORTHO05D006338 8.3e-99 364.0 219 84.9
SEGI_02516 Sequoiadendron giganteum HOM05D005119 ORTHO05D006338 1.4e-98 363.2 220 85.5
Oeu022226.2 Olea europaea HOM05D005119 ORTHO05D006338 1.7e-96 356.3 300 67.7
HPP92_006662 Vanilla planifolia HOM05D005119 ORTHO05D006338 3.9e-96 355.1 228 83.3
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 1.3e-91 340.1 233 80.3
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 1.1e-90 337.0 192 91.7
SMO347G0469 Selaginella moellendorffii HOM05D005119 ORTHO05D006338 4.3e-87 325.1 208 80.3
CDE07G1923 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 5.6e-87 324.7 214 77.6
Mapoly0024s0118 Marchantia polymorpha HOM05D005119 ORTHO05D006338 3.1e-85 318.9 212 77.8
Solyc11g071510.3 Solanum lycopersicum HOM05D005119 ORTHO05D006338 2.7e-81 305.8 190 86.8
Lj2C929T5 Lonicera japonica HOM05D005119 ORTHO05D006338 2.1e-78 296.2 179 88.8
Pp3c19_11640 Physcomitrium patens HOM05D005119 ORTHO05D006338 3.1e-77 292.4 208 74.5
Haze_23668 Corylus avellana HOM05D005119 ORTHO05D006338 5.3e-77 291.6 194 83.5
Gohir.A08G000076 Gossypium hirsutum HOM05D005119 ORTHO05D006338 9.9e-76 287.3 161 95.0
FvH4_3g27140 Fragaria vesca HOM05D005119 ORTHO05D006338 2.2e-75 286.2 158 95.6
CiPaw.14G091700 Carya illinoinensis HOM05D005119 ORTHO05D006338 8.4e-75 284.3 158 94.9
TAR369G0017 Trochodendron aralioides HOM05D005119 ORTHO05D006338 1.4e-74 283.5 158 94.9
Nn7g37297 Nelumbo nucifera HOM05D005119 ORTHO05D006338 1.2e-73 280.4 175 82.3
SGA_v2.0_scaffold79G25507 Striga asiatica HOM05D005119 ORTHO05D006338 2.1e-73 279.6 157 93.6
DCAR_031602 Daucus carota HOM05D005119 ORTHO05D006338 8.7e-72 274.2 165 89.1
AagrBONN_evm.TU.Sc2ySwM_228.3807 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.1e-70 269.6 186 76.9
Cpa.g.sc103.65 Carica papaya HOM05D005119 ORTHO05D006338 6.9e-69 264.6 161 86.3
CDE08G0206 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 1.5e-68 263.5 179 77.1
CDE04G1732 Ceratophyllum demersum HOM05D005119 ORTHO05D001779 4.8e-62 241.9 160 80.0
AUR62020163 Chenopodium quinoa HOM05D005119 ORTHO05D006338 6.7e-56 221.5 124 94.4
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 2.8e-54 216.1 161 75.8
Gorai.006G031100 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.4e-45 186.4 110 92.7
Solyc01g009145.1 Solanum lycopersicum HOM05D005119 ORTHO05D006338 5.0e-43 178.7 103 91.3
EL10Ac6g14714 Beta vulgaris HOM05D005119 ORTHO05D006338 1.4e-42 177.2 104 91.3
Gohir.D11G235450 Gossypium hirsutum HOM05D005119 ORTHO05D006338 3.4e-36 156.0 158 58.2
Gorai.004G093900 Gossypium raimondii HOM05D005119 ORTHO05D006338 8.5e-35 151.4 88 93.2
AagrBONN_evm.TU.Sc2ySwM_368.775 Anthoceros agrestis HOM05D005119 ORTHO05D006338 5.3e-29 132.1 79 82.3
PRCOL_00002764 Prasinoderma coloniale HOM05D005119 ORTHO05D006338 1.6e-25 120.6 206 38.8
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea HOM05D005119 ORTHO05D006338 5.2e-24 115.5 81 77.8
Actinidia37188 Actinidia chinensis HOM05D005119 ORTHO05D006338 2.2e-22 110.2 56 96.4
RcHm_v2.0_Chr5g0049771 Rosa chinensis HOM05D005119 ORTHO05D006338 2.2e-19 100.1 64 76.6
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 8.0e-17 91.7 66 72.7
SHI25369 Sapria himalayana HOM05D005119 ORTHO05D006338 1.2e-15 87.8 65 67.7
Dinv01011 Davidia involucrata HOM05D005119 ORTHO05D006338 1.7e-11 73.9 50 76.0


User provided reference genes

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