Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.2798 Acer truncatum HOM05D006191 ORTHO05D007660 1.5e-28 129.0 76 100.0
Ciclev10017371m.g Citrus clementina HOM05D006191 ORTHO05D007660 2.2e-27 125.2 76 96.1
MBI13_g01622_MAGBIO Magnolia biondii HOM05D006191 ORTHO05D007660 2.0e-25 118.6 71 98.6
Oeu030629.1 Olea europaea HOM05D006191 ORTHO05D007660 6.0e-25 117.1 71 98.6
Peaxi162Scf00004g04011 Petunia axillaris HOM05D006191 ORTHO05D007660 7.8e-25 116.7 76 90.8
CDE02G2705 Ceratophyllum demersum HOM05D006191 ORTHO05D007660 2.3e-24 115.2 71 93.0
Nn2g14883 Nelumbo nucifera HOM05D006191 ORTHO05D007660 2.3e-24 115.2 71 94.4
Nn7g36644 Nelumbo nucifera HOM05D000965 ORTHO05D000842 2.3e-24 115.2 71 94.4
GSVIVG01037255001 Vitis vinifera HOM05D006191 ORTHO05D007660 2.3e-24 115.2 71 97.2
AagrBONN_evm.TU.Sc2ySwM_362.136 Anthoceros agrestis HOM05D006191 ORTHO05D007660 3.0e-24 114.8 71 94.4
CSS0014439 Camellia sinensis var. sinensis HOM05D006191 ORTHO05D007660 3.0e-24 114.8 71 95.8
CAN.G484.24 Capsicum annuum HOM05D006191 ORTHO05D007660 3.0e-24 114.8 74 89.2
Duzib106G0217 Durio zibethinus HOM05D006191 ORTHO05D007660 3.0e-24 114.8 71 95.8
Duzib128G0357 Durio zibethinus HOM05D006191 ORTHO05D007660 3.0e-24 114.8 71 95.8
Gohir.A10G183900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 3.0e-24 114.8 71 95.8
Gohir.D10G191200 Gossypium hirsutum HOM05D006191 ORTHO05D007660 3.0e-24 114.8 71 95.8
Gorai.011G214000 Gossypium raimondii HOM05D006191 ORTHO05D007660 3.0e-24 114.8 71 95.8
TAR623G0607 Trochodendron aralioides HOM05D006191 ORTHO05D007660 3.0e-24 114.8 71 95.8
Dinv05064 Davidia involucrata HOM05D006191 ORTHO05D007660 3.9e-24 114.4 73 90.4
Duzib114G0719 Durio zibethinus HOM05D006191 ORTHO05D007660 3.9e-24 114.4 71 95.8
Potri.009G071900 Populus trichocarpa HOM05D006191 ORTHO05D007660 3.9e-24 114.4 71 94.4
Sabra09G0054200 Salix brachista HOM05D006191 ORTHO05D007660 3.9e-24 114.4 71 94.4
Thecc.10G162100 Theobroma cacao HOM05D006191 ORTHO05D007660 3.9e-24 114.4 71 94.4
Atru.chr12.1349 Acer truncatum HOM05D006191 ORTHO05D007660 5.0e-24 114.0 71 94.4
CiPaw.14G114100 Carya illinoinensis HOM05D006191 ORTHO05D007660 5.0e-24 114.0 71 94.4
COL.COLO4_04799 Corchorus olitorius HOM05D006191 ORTHO05D007660 5.0e-24 114.0 71 94.4
Potri.001G277100 Populus trichocarpa HOM05D006191 ORTHO05D007660 5.0e-24 114.0 71 93.0
THA.LOC104819131 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 5.0e-24 114.0 71 94.4
TWI38G0245 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 5.0e-24 114.0 71 93.0
TWI63G0884 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 5.0e-24 114.0 71 93.0
Carub.0003s0749 Capsella rubella HOM05D006191 ORTHO05D007660 6.6e-24 113.6 76 84.2
Hma1.2p1_0115F.1_g055930 Hydrangea macrophylla HOM05D006191 ORTHO05D007660 6.6e-24 113.6 71 93.0
Sopen12g034350 Solanum pennellii HOM05D006191 ORTHO05D007660 6.6e-24 113.6 71 93.0
MELO3C014567.2 Cucumis melo HOM05D006191 ORTHO05D007660 8.6e-24 113.2 71 94.4
CsaV3_6G039080 Cucumis sativus L. HOM05D006191 ORTHO05D007660 8.6e-24 113.2 71 94.4
DCAR_002114 Daucus carota HOM05D006191 ORTHO05D007660 8.6e-24 113.2 73 90.4
Lsat_1_v5_gn_2_33900 Lactuca sativa HOM05D006191 ORTHO05D007660 8.6e-24 113.2 71 91.5
Nitab4.5_0004018g0100 Nicotiana tabacum HOM05D006191 ORTHO05D007660 8.6e-24 113.2 73 89.0
TPR.G8494 Trifolium pratense HOM05D006191 ORTHO05D007660 8.6e-24 113.2 71 94.4
A05p40330 Brassica napus HOM05D006191 ORTHO05D007660 1.1e-23 112.8 73 86.3
Gohir.D13G004600 Gossypium hirsutum HOM05D006191 ORTHO05D007660 1.1e-23 112.8 71 94.4
Manes.01G180500 Manihot esculenta HOM05D006191 ORTHO05D007660 1.1e-23 112.8 71 94.4
Oeu001494.1 Olea europaea HOM05D006191 ORTHO05D007660 1.1e-23 112.8 71 94.4
Sopen11g024870 Solanum pennellii HOM05D006191 ORTHO05D007660 1.1e-23 112.8 71 93.0
PGSC0003DMG400031241 Solanum tuberosum HOM05D006191 ORTHO05D007660 1.1e-23 112.8 71 93.0
Lalb_Chr07g0183161 Lupinus albus HOM05D006191 ORTHO05D007660 1.5e-23 112.5 73 91.8
Sed0001199 Sechium edule HOM05D006191 ORTHO05D007660 1.5e-23 112.5 71 93.0
THA.LOC104825593 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 1.5e-23 112.5 71 93.0
Cpa.g.sc3.359 Carica papaya HOM05D006191 ORTHO05D007660 1.9e-23 112.1 71 93.0
Eucgr.J01186 Eucalyptus grandis HOM05D006191 ORTHO05D007660 1.9e-23 112.1 71 91.5
PGR031G0246 Punica granatum HOM05D006191 ORTHO05D007660 1.9e-23 112.1 71 93.0
Thhalv10021870m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 2.5e-23 111.7 73 89.0
HanXRQChr06g0182571 Helianthus annuus HOM05D006191 ORTHO05D007660 2.5e-23 111.7 73 87.7
Medtr3g434780 Medicago truncatula HOM05D006191 ORTHO05D007660 2.5e-23 111.7 71 93.0
C05p59410 Brassica napus HOM05D006191 ORTHO05D007660 4.3e-23 110.9 73 83.6
Thhalv10022475m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 4.3e-23 110.9 73 87.7
Gorai.013G005000 Gossypium raimondii HOM05D006191 ORTHO05D007660 4.3e-23 110.9 71 93.0
BolC5t34598H Brassica oleracea HOM05D006191 ORTHO05D007660 5.6e-23 110.5 73 83.6
Glyma.08G302200 Glycine max HOM05D006191 ORTHO05D007660 5.6e-23 110.5 71 91.5
QL01p017491 Quercus lobata HOM05D006191 ORTHO05D007660 5.6e-23 110.5 70 92.9
Mapoly0046s0044 Marchantia polymorpha HOM05D006191 ORTHO05D007660 7.3e-23 110.2 70 92.9
Sc11g0006400 Simmondsia chinensis HOM05D006191 ORTHO05D007660 9.5e-23 109.8 71 91.5
Aa31LG5G18460 Aethionema arabicum HOM05D006191 ORTHO05D007660 1.2e-22 109.4 71 88.7
BcaC05g29581 Brassica carinata HOM05D006191 ORTHO05D007660 1.6e-22 109.0 73 82.2
CAN.G1850.1 Capsicum annuum HOM05D006191 ORTHO05D007660 1.6e-22 109.0 70 91.4
CANSAT54G1797 Cannabis sativa HOM05D006191 ORTHO05D007660 2.1e-22 108.6 71 90.1
Potri.003G197801 Populus trichocarpa HOM05D006191 ORTHO05D007660 2.1e-22 108.6 71 90.1
Potri.T125106 Populus trichocarpa HOM05D006191 ORTHO05D007660 2.1e-22 108.6 71 90.1
Migut.D00650 Erythranthe guttata HOM05D006191 ORTHO05D007660 2.8e-22 108.2 71 88.7
PSO339G4970 Papaver somniferum HOM05D006191 ORTHO05D007660 3.6e-22 107.8 70 91.4
PSO384G4772 Papaver somniferum HOM05D006191 ORTHO05D007660 3.6e-22 107.8 70 91.4
CARHR082640 Cardamine hirsuta HOM05D006191 ORTHO05D007660 4.7e-22 107.5 71 85.9
Solyc12g099705.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 8.1e-22 106.7 71 88.7
Lj6g0026433 Lotus japonicus HOM05D006191 ORTHO05D007660 1.1e-21 106.3 71 85.9
Sp3g06830 Schrenkiella parvula HOM05D006191 ORTHO05D007660 1.4e-21 105.9 73 80.8
HPP92_025477 Vanilla planifolia HOM05D006191 ORTHO05D007660 1.4e-21 105.9 71 88.7
BcaB04g21265 Brassica carinata HOM05D006191 ORTHO05D007660 1.8e-21 105.5 74 83.8
AT3G07910 Arabidopsis thaliana HOM05D006191 ORTHO05D007660 3.1e-21 104.8 73 83.6
EL10Ac2g02816 Beta vulgaris HOM05D006191 ORTHO05D007660 4.0e-21 104.4 71 85.9
ECA238G0093 Erigeron canadensis HOM05D006191 ORTHO05D007660 8.9e-21 103.2 76 80.3
BcaC09g47957 Brassica carinata HOM05D006191 ORTHO05D007660 1.2e-20 102.8 73 79.5
BolC1t05519H Brassica oleracea HOM05D006191 ORTHO05D007660 1.2e-20 102.8 73 79.5
BraA01t04352Z Brassica rapa HOM05D006191 ORTHO05D007660 1.2e-20 102.8 73 79.5
MD00G1126200 Malus domestica HOM05D006191 ORTHO05D007660 1.2e-20 102.8 76 77.6
MD00G1154200 Malus domestica HOM05D006191 ORTHO05D007660 1.2e-20 102.8 76 77.6
Sabra16G0171200 Salix brachista HOM05D006191 ORTHO05D007660 1.2e-20 102.8 74 85.1
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 2.6e-20 101.7 65 93.8
CDE04G1776 Ceratophyllum demersum HOM05D003123 ORTHO05D003492 3.4e-20 101.3 71 85.9
Glyma.18G117700 Glycine max HOM05D006191 ORTHO05D007660 3.4e-20 101.3 67 91.0
A03p35550 Brassica napus HOM05D006191 ORTHO05D007660 4.4e-20 100.9 67 85.1
C03p43190 Brassica napus HOM05D006191 ORTHO05D007660 4.4e-20 100.9 67 85.1
BolC3t16588H Brassica oleracea HOM05D006191 ORTHO05D007660 4.4e-20 100.9 67 85.1
BraA03t12731Z Brassica rapa HOM05D006191 ORTHO05D007660 4.4e-20 100.9 67 85.1
SMO301G0059 Selaginella moellendorffii HOM05D006191 ORTHO05D007660 5.8e-20 100.5 67 85.1
Cfa010050 Carpinus fangiana HOM05D000477 ORTHO05D000338 7.5e-20 100.1 74 82.4
Prupe.4G268400 Prunus persica HOM05D006191 ORTHO05D007660 9.9e-20 99.8 74 77.0
ClCG02G022950 Citrullus lanatus HOM05D006191 ORTHO05D007660 1.7e-19 99.0 49 95.9
Zm00001eb432230 Zea mays HOM05D006191 ORTHO05D007660 2.2e-19 98.6 70 81.4
Haze_23211 Corylus avellana HOM05D000001 ORTHO05D000003 2.9e-19 98.2 49 93.9
Cc01_g05600 Coffea canephora HOM05D006191 ORTHO05D007660 4.9e-19 97.4 71 83.1
Gohir.A13G004900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 6.4e-19 97.1 78 82.1
Pp3c9_12820 Physcomitrium patens HOM05D006191 ORTHO05D007660 6.4e-19 97.1 73 71.2
Solyc11g150142.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 1.4e-18 95.9 65 81.5
Pp3c15_6032 Physcomitrium patens HOM05D006191 ORTHO05D007660 2.1e-17 92.0 72 69.4
RcHm_v2.0_Chr5g0050711 Rosa chinensis HOM05D006191 ORTHO05D007660 3.5e-17 91.3 73 72.6
FvH4_3g28030 Fragaria vesca HOM05D006191 ORTHO05D007660 4.6e-17 90.9 73 71.2
FAN16G3748 Fragaria x ananassa HOM05D006191 ORTHO05D007660 4.6e-17 90.9 73 71.2
FAN25G1591 Fragaria x ananassa HOM05D006191 ORTHO05D007660 1.0e-16 89.7 73 69.9
ATR0745G066 Amborella trichopoda HOM05D006191 ORTHO05D007660 1.7e-16 89.0 76 69.7
Aqoxy2G00346 Aquilegia oxysepala HOM05D006191 ORTHO05D007660 1.7e-16 89.0 68 67.6
AUR62037186 Chenopodium quinoa HOM05D006191 ORTHO05D007660 1.7e-16 89.0 49 81.6
FAN21G2777 Fragaria x ananassa HOM05D006191 ORTHO05D007660 1.1e-15 86.3 70 70.0
Psat5g217760 Pisum sativum HOM05D006191 ORTHO05D007660 2.5e-15 85.1 67 80.6
TPR.G17809 Trifolium pratense HOM05D006191 ORTHO05D007660 4.3e-15 84.3 64 84.4
BcaC09g47961 Brassica carinata HOM05D006191 ORTHO05D007660 7.3e-15 83.6 62 80.6
Lalb_Chr04g0264081 Lupinus albus HOM05D006191 ORTHO05D007660 7.3e-15 83.6 64 84.4
MCO15G227 Micromonas commoda HOM05D006191 ORTHO05D007660 9.5e-15 83.2 73 63.0
Zm00001eb068350 Zea mays HOM05D006191 ORTHO05D007660 1.2e-14 82.8 63 79.4
Glyma.04G138500 Glycine max HOM05D006191 ORTHO05D007660 3.6e-14 81.3 64 82.8
arahy.Tifrunner.gnm1.ann1.MB5P1Q Arachis hypogaea HOM05D006191 ORTHO05D007660 6.2e-14 80.5 64 82.8
Lalb_Chr25g0282111 Lupinus albus HOM05D006191 ORTHO05D007660 8.1e-14 80.1 64 81.2
Phvul.005G027500 Phaseolus vulgaris HOM05D006191 ORTHO05D007660 1.1e-13 79.7 64 81.2
arahy.Tifrunner.gnm1.ann1.HDQ2FX Arachis hypogaea HOM05D006191 ORTHO05D007660 1.4e-13 79.3 64 81.2
Rhsim01G0194500 Rhododendron simsii HOM05D000189 ORTHO05D000474 2.4e-13 78.6 41 92.7
Medtr3g017440 Medicago truncatula HOM05D006191 ORTHO05D007660 5.2e-13 77.4 67 74.6
Cre01.g010500 Chlamydomonas reinhardtii HOM05D006191 ORTHO05D007660 8.9e-13 76.6 70 47.1
Lj3g0010990 Lotus japonicus HOM05D006191 ORTHO05D007660 1.5e-12 75.9 64 78.1
PRCOL_00002293 Prasinoderma coloniale HOM05D006191 ORTHO05D007660 9.9e-12 73.2 70 51.4
FAN11G1162 Fragaria x ananassa HOM05D006191 ORTHO05D007660 3.5e-09 64.7 38 76.3
TAR633G2362 Trochodendron aralioides HOM05D006191 ORTHO05D007660 1.3e-08 62.8 43 95.3
Dinv36184 Davidia involucrata HOM05D006191 ORTHO05D007660 7.3e-07 57.0 45 84.4
VMungo1080G0693 Vigna mungo HOM05D006191 ORTHO05D007660 7.3e-07 57.0 107 47.7
SalBow1G5107 Salvia bowleyana HOM05D006191 ORTHO05D007660 2.8e-06 55.1 45 64.4


User provided reference genes

Program Settings