Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.2781 Acer truncatum HOM05D004808 ORTHO05D005279 9.6e-40 166.4 85 100.0
Ciclev10014928m.g Citrus clementina HOM05D004808 ORTHO05D005279 1.3e-20 102.8 84 64.3
Potri.009G071700 Populus trichocarpa HOM05D004808 ORTHO05D005279 2.5e-16 88.6 84 56.0
Duzib168G1750 Durio zibethinus HOM05D004808 ORTHO05D005279 1.2e-13 79.7 84 58.3
Duzib150G0464 Durio zibethinus HOM05D004808 ORTHO05D005279 4.5e-13 77.8 84 56.0
TAR636G2671 Trochodendron aralioides HOM05D004808 ORTHO05D005279 1.0e-12 76.6 82 53.7
GSVIVG01037260001 Vitis vinifera HOM05D004808 ORTHO05D005279 1.0e-12 76.6 84 50.0
Prupe.4G267700 Prunus persica HOM05D004808 ORTHO05D005279 1.7e-12 75.9 80 53.8
Potri.001G276800 Populus trichocarpa HOM05D004808 ORTHO05D005279 2.2e-12 75.5 83 49.4
CiPaw.13G151800 Carya illinoinensis HOM05D004808 ORTHO05D005279 3.8e-12 74.7 84 46.4
FAN16G0786 Fragaria x ananassa HOM05D004808 ORTHO05D005279 8.5e-12 73.6 80 52.5
FAN11G1822 Fragaria x ananassa HOM05D004808 ORTHO05D005279 1.9e-11 72.4 80 52.5
Manes.01G179900 Manihot esculenta HOM05D004808 ORTHO05D005279 1.9e-11 72.4 84 48.8
COL.COLO4_05197 Corchorus olitorius HOM05D004808 ORTHO05D005279 3.2e-11 71.6 84 51.2
Hma1.2p1_0382F.1_g140110 Hydrangea macrophylla HOM05D004808 ORTHO05D005279 5.5e-11 70.9 82 47.6
MD03G1167600 Malus domestica HOM05D004808 ORTHO05D005279 5.5e-11 70.9 80 51.2
Gohir.A13G219300 Gossypium hirsutum HOM05D004808 ORTHO05D005279 9.4e-11 70.1 84 52.4
MD11G1186500 Malus domestica HOM05D004808 ORTHO05D005279 9.4e-11 70.1 81 51.9
CSS0046494 Camellia sinensis var. sinensis HOM05D004808 ORTHO05D005279 2.1e-10 68.9 86 48.8
Gorai.013G254100 Gossypium raimondii HOM05D004808 ORTHO05D005279 2.1e-10 68.9 84 52.4
Eucgr.J00701 Eucalyptus grandis HOM05D004808 ORTHO05D005279 2.7e-10 68.6 82 48.8
Gohir.D13G223000 Gossypium hirsutum HOM05D004808 ORTHO05D005279 4.6e-10 67.8 84 51.2
Haze_23219 Corylus avellana HOM05D004808 ORTHO05D005279 6.1e-10 67.4 83 43.4
FvH4_3g27990 Fragaria vesca HOM05D004808 ORTHO05D005279 6.1e-10 67.4 80 52.5
Thecc.09G249900 Theobroma cacao HOM05D004808 ORTHO05D005279 1.0e-09 66.6 84 51.2
TAR633G2565 Trochodendron aralioides HOM05D004808 ORTHO05D005279 1.0e-09 66.6 81 48.1
RcHm_v2.0_Chr5g0050681 Rosa chinensis HOM05D004808 ORTHO05D005279 3.0e-09 65.1 80 47.5
CiPaw.14G113900 Carya illinoinensis HOM05D004808 ORTHO05D005279 3.9e-09 64.7 83 43.4
Cc02_g33420 Coffea canephora HOM05D004808 ORTHO05D005279 5.1e-09 64.3 85 48.2
Actinidia11660 Actinidia chinensis HOM05D004808 ORTHO05D005279 1.1e-08 63.2 80 46.2
Gohir.D07G125000 Gossypium hirsutum HOM05D004808 ORTHO05D005279 3.3e-08 61.6 84 48.8
Gorai.001G134800 Gossypium raimondii HOM05D004808 ORTHO05D005279 3.3e-08 61.6 84 48.8
Sabra09G0054000 Salix brachista HOM05D004808 ORTHO05D005279 3.3e-08 61.6 64 48.4
Gohir.A07G120700 Gossypium hirsutum HOM05D004808 ORTHO05D005279 5.7e-08 60.8 84 47.6
CANSAT54G0995 Cannabis sativa HOM05D004808 ORTHO05D005279 1.7e-07 59.3 67 52.2
QL01p017473 Quercus lobata HOM05D004808 ORTHO05D005279 2.2e-07 58.9 84 39.3
Nn7g36662 Nelumbo nucifera HOM05D004808 ORTHO05D005279 2.8e-07 58.5 86 45.3
Hund21986 Selenicereus undatus HOM05D004808 ORTHO05D005279 3.7e-07 58.2 82 40.2
Actinidia06956 Actinidia chinensis HOM05D004808 ORTHO05D005279 4.8e-07 57.8 85 47.1
Dinv05059 Davidia involucrata HOM05D004808 ORTHO05D005279 4.8e-07 57.8 63 47.6
Actinidia16374 Actinidia chinensis HOM05D004808 ORTHO05D005279 6.3e-07 57.4 85 47.1
MELO3C014565.2 Cucumis melo HOM05D004808 ORTHO05D005279 8.2e-07 57.0 80 38.8
Sed0021712 Sechium edule HOM05D004808 ORTHO05D005279 1.8e-06 55.8 80 37.5
CsaV3_6G039040 Cucumis sativus L. HOM05D004808 ORTHO05D005279 3.1e-06 55.1 80 37.5
THA.LOC104806525 Tarenaya hassleriana HOM05D004808 ORTHO05D005279 9.1e-06 53.5 82 43.9


User provided reference genes

Program Settings